RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 AEBP1Q8IUX7 1158 aa5.61□□□□□ -1.51
XRN1-202ENST00000392981 ARID3CA6NKF2 412 aa5.6□□□□□ -1.51
XRN1-202ENST00000392981 ZNF219Q9P2Y4 722 aaPredicted RBP5.58□□□□□ -1.52
XRN1-202ENST00000392981 APBB1O00213 710 aa5.58□□□□□ -1.52
XRN1-202ENST00000392981 BRPF1P55201 1214 aaPredicted RBP5.58□□□□□ -1.52
XRN1-202ENST00000392981 P3H3Q8IVL6 736 aa5.57□□□□□ -1.52
XRN1-202ENST00000392981 KRI1Q8N9T8 703 aaKnown RBP5.56□□□□□ -1.52
XRN1-202ENST00000392981 STK25O00506 426 aa5.56□□□□□ -1.52
XRN1-202ENST00000392981 IL27Q8NEV9 243 aa5.56□□□□□ -1.52
XRN1-202ENST00000392981 HRCP23327 699 aa5.56□□□□□ -1.52
XRN1-202ENST00000392981 RAD21O60216 631 aa5.55□□□□□ -1.52
XRN1-202ENST00000392981 APLP2Q06481 763 aa5.55□□□□□ -1.52
XRN1-202ENST00000392981 ZMYND15Q9H091 742 aa5.55□□□□□ -1.52
XRN1-202ENST00000392981 HMGB1P09429 215 aaKnown RBP5.55□□□□□ -1.52
XRN1-202ENST00000392981 KCTD17Q8N5Z5 321 aa5.55□□□□□ -1.52
XRN1-202ENST00000392981 SLC24A3Q9HC58 644 aa5.55□□□□□ -1.52
XRN1-202ENST00000392981 RBM25P49756 843 aaKnown RBP5.54□□□□□ -1.52
XRN1-202ENST00000392981 TRHP20396 242 aaPredicted RBP5.53□□□□□ -1.52
XRN1-202ENST00000392981 MSH5O43196 834 aa5.53□□□□□ -1.52
XRN1-202ENST00000392981 USP35Q9P2H5 1018 aa5.53□□□□□ -1.52
XRN1-202ENST00000392981 STK24Q9Y6E0 443 aa5.49□□□□□ -1.53
XRN1-202ENST00000392981 DCAF8Q5TAQ9 597 aa5.48□□□□□ -1.53
XRN1-202ENST00000392981 DNAJC5BQ9UF47 199 aa5.48□□□□□ -1.53
XRN1-202ENST00000392981 HOXD11P31277 338 aaPredicted RBP5.47□□□□□ -1.53
XRN1-202ENST00000392981 SHROOM4Q9ULL8 1493 aa5.46□□□□□ -1.53
XRN1-202ENST00000392981 TMCO4Q5TGY1 634 aa5.45□□□□□ -1.54
XRN1-202ENST00000392981 ZBTB47Q9UFB7 747 aaPredicted RBP5.45□□□□□ -1.54
XRN1-202ENST00000392981 HS6ST3Q8IZP7 471 aa5.45□□□□□ -1.54
XRN1-202ENST00000392981 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.44□□□□□ -1.54
XRN1-202ENST00000392981 FBXW7Q969H0 707 aa5.44□□□□□ -1.54
XRN1-202ENST00000392981 GPBP1L1Q9HC44 474 aaPredicted RBP5.44□□□□□ -1.54
XRN1-202ENST00000392981 DMRT2Q9Y5R5 561 aa5.43□□□□□ -1.54
XRN1-202ENST00000392981 FOXD4L5Q5VV16 416 aaPredicted RBP5.43□□□□□ -1.54
XRN1-202ENST00000392981 FOXD4L4Q8WXT5 416 aaPredicted RBP5.43□□□□□ -1.54
XRN1-202ENST00000392981 HSP90B1P14625 803 aaKnown RBP5.42□□□□□ -1.54
XRN1-202ENST00000392981 ZC3H15Q8WU90 426 aaKnown RBP5.42□□□□□ -1.54
XRN1-202ENST00000392981 CCDC97Q96F63 343 aaPredicted RBP5.42□□□□□ -1.54
XRN1-202ENST00000392981 RYDENQ9NUL5 291 aaKnown RBP5.42□□□□□ -1.54
XRN1-202ENST00000392981 STAG3Q9UJ98 1225 aa5.41□□□□□ -1.54
XRN1-202ENST00000392981 ZNF692Q9BU19 519 aaPredicted RBP5.4□□□□□ -1.54
XRN1-202ENST00000392981 KCNV2Q8TDN2 545 aa5.4□□□□□ -1.55
XRN1-202ENST00000392981 GZF1Q9H116 711 aaPredicted RBP5.4□□□□□ -1.55
XRN1-202ENST00000392981 LOC105371045A0A1W2PR82 267 aa5.4□□□□□ -1.55
XRN1-202ENST00000392981 POLA2Q14181 598 aa5.39□□□□□ -1.55
XRN1-202ENST00000392981 CCDC82Q8N4S0 544 aa5.39□□□□□ -1.55
XRN1-202ENST00000392981 FAM9AQ8IZU1 332 aaPredicted RBP5.39□□□□□ -1.55
XRN1-202ENST00000392981 BCL11BQ9C0K0 894 aaPredicted RBP5.39□□□□□ -1.55
XRN1-202ENST00000392981 SMYD5Q6GMV2 418 aa5.38□□□□□ -1.55
XRN1-202ENST00000392981 CAPN15O75808 1086 aa5.38□□□□□ -1.55
XRN1-202ENST00000392981 MKRN4PQ13434 485 aaPredicted RBP5.38□□□□□ -1.55
XRN1-202ENST00000392981 U3KPZ7 1027 aaPredicted RBP5.38□□□□□ -1.55
XRN1-202ENST00000392981 MTMR7Q9Y216 660 aa5.38□□□□□ -1.55
XRN1-202ENST00000392981 RIOK3O14730 519 aaKnown RBP5.37□□□□□ -1.55
XRN1-202ENST00000392981 GTPBP6O43824 516 aaPredicted RBP5.37□□□□□ -1.55
XRN1-202ENST00000392981 ZNF316A6NFI3 1004 aaPredicted RBP5.36□□□□□ -1.55
XRN1-202ENST00000392981 E9PSI1 815 aa5.36□□□□□ -1.55
XRN1-202ENST00000392981 ZNF777Q9ULD5 760 aaPredicted RBP5.36□□□□□ -1.55
XRN1-202ENST00000392981 SEMA3EO15041 775 aa5.35□□□□□ -1.55
XRN1-202ENST00000392981 PPM1GO15355 546 aaPredicted RBP5.35□□□□□ -1.55
XRN1-202ENST00000392981 GSE1Q14687 1217 aa5.35□□□□□ -1.55
XRN1-202ENST00000392981 NKX1-1Q15270 411 aaPredicted RBP5.34□□□□□ -1.55
XRN1-202ENST00000392981 NECTIN2Q92692 538 aa5.34□□□□□ -1.55
XRN1-202ENST00000392981 DNAJC5Q9H3Z4 198 aa5.34□□□□□ -1.55
XRN1-202ENST00000392981 IGSF3O75054 1194 aa5.34□□□□□ -1.55
XRN1-202ENST00000392981 ZNF428Q96B54 188 aa5.34□□□□□ -1.56
XRN1-202ENST00000392981 MFAP1P55081 439 aaKnown RBP5.33□□□□□ -1.56
XRN1-202ENST00000392981 PPP1R1BQ9UD71 204 aaPredicted RBP5.33□□□□□ -1.56
XRN1-202ENST00000392981 ABCB7O75027 752 aa5.32□□□□□ -1.56
XRN1-202ENST00000392981 PABPN1Q86U42 306 aaKnown RBP eCLIP5.32□□□□□ -1.56
XRN1-202ENST00000392981 C1orf115Q9H7X2 142 aa5.32□□□□□ -1.56
XRN1-202ENST00000392981 ARID4BQ4LE39 1312 aaPredicted RBP5.32□□□□□ -1.56
XRN1-202ENST00000392981 MKRN3Q13064 507 aaKnown RBP5.32□□□□□ -1.56
XRN1-202ENST00000392981 KDM4CQ9H3R0 1056 aa5.32□□□□□ -1.56
XRN1-202ENST00000392981 VGFO15240 615 aaPredicted RBP5.31□□□□□ -1.56
XRN1-202ENST00000392981 CLUAP1Q96AJ1 413 aa5.31□□□□□ -1.56
XRN1-202ENST00000392981 AK7Q96M32 723 aa5.31□□□□□ -1.56
XRN1-202ENST00000392981 GPIHBP1Q8IV16 184 aa5.3□□□□□ -1.56
XRN1-202ENST00000392981 FLIIQ13045 1269 aa5.29□□□□□ -1.56
XRN1-202ENST00000392981 PROM2Q8N271 834 aa5.29□□□□□ -1.56
XRN1-202ENST00000392981 CHMP4AQ9BY43 222 aa5.29□□□□□ -1.56
XRN1-202ENST00000392981 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.29□□□□□ -1.56
XRN1-202ENST00000392981 TTLL12Q14166 644 aaPredicted RBP5.29□□□□□ -1.56
XRN1-202ENST00000392981 FAM212AQ96EL1 285 aa5.29□□□□□ -1.56
XRN1-202ENST00000392981 ZFP91Q96JP5 570 aaPredicted RBP5.29□□□□□ -1.56
XRN1-202ENST00000392981 ACIN1Q9UKV3 1341 aaKnown RBP5.28□□□□□ -1.56
XRN1-202ENST00000392981 E2F4Q16254 413 aa5.27□□□□□ -1.57
XRN1-202ENST00000392981 RNF25Q96BH1 459 aaPredicted RBP5.27□□□□□ -1.57
XRN1-202ENST00000392981 ZBTB12Q9Y330 459 aaPredicted RBP5.25□□□□□ -1.57
XRN1-202ENST00000392981 PYGBP11216 843 aa5.24□□□□□ -1.57
XRN1-202ENST00000392981 PCMTD1Q96MG8 357 aaPredicted RBP5.24□□□□□ -1.57
XRN1-202ENST00000392981 RBM26Q5T8P6 1007 aaKnown RBP5.23□□□□□ -1.57
XRN1-202ENST00000392981 ARHGEF1Q92888 912 aaKnown RBP5.23□□□□□ -1.57
XRN1-202ENST00000392981 PDE4DQ08499 809 aa5.23□□□□□ -1.57
XRN1-202ENST00000392981 FAM117AQ9C073 453 aa5.22□□□□□ -1.57
XRN1-202ENST00000392981 CADPS2Q86UW7 1296 aa5.22□□□□□ -1.57
XRN1-202ENST00000392981 RETREG2Q8NC44 543 aa5.22□□□□□ -1.57
XRN1-202ENST00000392981 ZNF526Q8TF50 670 aaPredicted RBP5.22□□□□□ -1.57
XRN1-202ENST00000392981 RFX1P22670 979 aa5.22□□□□□ -1.57
XRN1-202ENST00000392981 NUTM2FA1L443 756 aa5.21□□□□□ -1.57
XRN1-202ENST00000392981 SERPINA10Q9UK55 444 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms