RNA–Protein interactions for RNA: ENST00000390495.1

TRAJ42-201, Transcript of T cell receptor alpha joining 42, humanhuman

APPRIS P1 BASIC

Gene TRAJ42, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ42-201ENST00000390495 ATF5Q9Y2D1 282 aaPredicted RBP5.61□□□□□ -1.51
TRAJ42-201ENST00000390495 LOC100996750A0A140TA64 210 aa5.57□□□□□ -1.52
TRAJ42-201ENST00000390495 KRTAP4-6Q9BYQ5 205 aa5.57□□□□□ -1.52
TRAJ42-201ENST00000390495 ATN1P54259 1190 aaPredicted RBP5.53□□□□□ -1.52
TRAJ42-201ENST00000390495 EMP3P54852 163 aa5.53□□□□□ -1.52
TRAJ42-201ENST00000390495 HS3ST6Q96QI5 342 aa5.53□□□□□ -1.52
TRAJ42-201ENST00000390495 SNPHO15079 494 aa5.52□□□□□ -1.53
TRAJ42-201ENST00000390495 MYT1LQ9UL68 1186 aa5.52□□□□□ -1.53
TRAJ42-201ENST00000390495 PAK3O75914 559 aaPredicted RBP5.51□□□□□ -1.53
TRAJ42-201ENST00000390495 POTEB3A0JP26 581 aa5.5□□□□□ -1.53
TRAJ42-201ENST00000390495 POTEBQ6S5H4 581 aa5.5□□□□□ -1.53
TRAJ42-201ENST00000390495 MS4A3Q96HJ5 214 aa5.5□□□□□ -1.53
TRAJ42-201ENST00000390495 SSUH2Q9Y2M2 353 aa5.48□□□□□ -1.53
TRAJ42-201ENST00000390495 FAM205CA6NFA0 338 aa5.46□□□□□ -1.54
TRAJ42-201ENST00000390495 MYCNP04198 464 aaPredicted RBP5.46□□□□□ -1.54
TRAJ42-201ENST00000390495 SEC24BO95487 1268 aa5.45□□□□□ -1.54
TRAJ42-201ENST00000390495 ZNF692Q9BU19 519 aaPredicted RBP5.45□□□□□ -1.54
TRAJ42-201ENST00000390495 IRX2Q9BZI1 471 aaPredicted RBP5.45□□□□□ -1.54
TRAJ42-201ENST00000390495 PLA2G2EQ9NZK7 142 aa5.45□□□□□ -1.54
TRAJ42-201ENST00000390495 COLQQ9Y215 455 aaPredicted RBP5.44□□□□□ -1.54
TRAJ42-201ENST00000390495 FBLN2P98095 1184 aa5.33□□□□□ -1.56
TRAJ42-201ENST00000390495 BMP2KQ9NSY1 1161 aaPredicted RBP5.33□□□□□ -1.56
TRAJ42-201ENST00000390495 PABPN1Q86U42 306 aaKnown RBP eCLIP5.32□□□□□ -1.56
TRAJ42-201ENST00000390495 PTGER2P43116 358 aa5.3□□□□□ -1.56
TRAJ42-201ENST00000390495 RGS20O76081 388 aa5.25□□□□□ -1.57
TRAJ42-201ENST00000390495 IER5LQ5T953 404 aa5.25□□□□□ -1.57
TRAJ42-201ENST00000390495 Q6ZNB5 142 aa5.25□□□□□ -1.57
TRAJ42-201ENST00000390495 CREBZFQ9NS37 354 aa5.25□□□□□ -1.57
TRAJ42-201ENST00000390495 TIE1P35590 1138 aa5.23□□□□□ -1.57
TRAJ42-201ENST00000390495 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.21□□□□□ -1.58
TRAJ42-201ENST00000390495 TRPC6Q9Y210 931 aa5.2□□□□□ -1.58
TRAJ42-201ENST00000390495 NPM1P06748 294 aaKnown RBP eCLIP5.16□□□□□ -1.58
TRAJ42-201ENST00000390495 TTLL13PA6NNM8 815 aa5.15□□□□□ -1.59
TRAJ42-201ENST00000390495 PLCG2P16885 1265 aa5.15□□□□□ -1.59
TRAJ42-201ENST00000390495 HCSTQ9UBK5 93 aa5.15□□□□□ -1.59
TRAJ42-201ENST00000390495 TRIM35Q9UPQ4 493 aa5.14□□□□□ -1.59
TRAJ42-201ENST00000390495 ERBB3P21860 1342 aa5.13□□□□□ -1.59
TRAJ42-201ENST00000390495 KIF12Q96FN5 646 aa5.09□□□□□ -1.59
TRAJ42-201ENST00000390495 MKRN4PQ13434 485 aaPredicted RBP5.07□□□□□ -1.6
TRAJ42-201ENST00000390495 ANKRD13DQ6ZTN6 518 aa5.05□□□□□ -1.6
TRAJ42-201ENST00000390495 ZNF775Q96BV0 537 aaPredicted RBP5.05□□□□□ -1.6
TRAJ42-201ENST00000390495 VARS2Q5ST30 1063 aaKnown RBP5.04□□□□□ -1.6
TRAJ42-201ENST00000390495 TRAF7Q6Q0C0 670 aa5.03□□□□□ -1.6
TRAJ42-201ENST00000390495 ZNF687Q8N1G0 1237 aa5.03□□□□□ -1.6
TRAJ42-201ENST00000390495 CCDC61Q9Y6R9 512 aa5.03□□□□□ -1.6
TRAJ42-201ENST00000390495 LCE2BO14633 110 aa5.02□□□□□ -1.61
TRAJ42-201ENST00000390495 HOXB1P14653 301 aaPredicted RBP5.02□□□□□ -1.61
TRAJ42-201ENST00000390495 IRX5P78411 483 aaPredicted RBP5.02□□□□□ -1.61
TRAJ42-201ENST00000390495 SUZ12Q15022 739 aaKnown RBP5.02□□□□□ -1.61
TRAJ42-201ENST00000390495 TSPYL2Q9H2G4 693 aaPredicted RBP5□□□□□ -1.61
TRAJ42-201ENST00000390495 MAP3K13O43283 966 aa4.99□□□□□ -1.61
TRAJ42-201ENST00000390495 ZNF787Q6DD87 383 aa4.98□□□□□ -1.61
TRAJ42-201ENST00000390495 C3orf67Q6ZVT6 689 aa4.98□□□□□ -1.61
TRAJ42-201ENST00000390495 MNX1P50219 401 aaPredicted RBP4.97□□□□□ -1.61
TRAJ42-201ENST00000390495 OCEL1Q9H607 264 aa4.97□□□□□ -1.61
TRAJ42-201ENST00000390495 ZNF710Q8N1W2 664 aa4.95□□□□□ -1.62
TRAJ42-201ENST00000390495 A0A0G2JS52 829 aa4.94□□□□□ -1.62
TRAJ42-201ENST00000390495 LAPTM4AQ15012 233 aa4.93□□□□□ -1.62
TRAJ42-201ENST00000390495 HOXB3P14651 431 aaPredicted RBP4.92□□□□□ -1.62
TRAJ42-201ENST00000390495 IFFO2Q5TF58 517 aa4.92□□□□□ -1.62
TRAJ42-201ENST00000390495 STAG3Q9UJ98 1225 aa4.92□□□□□ -1.62
TRAJ42-201ENST00000390495 LSM11P83369 360 aaKnown RBP eCLIP4.91□□□□□ -1.62
TRAJ42-201ENST00000390495 STK17AQ9UEE5 414 aa4.9□□□□□ -1.63
TRAJ42-201ENST00000390495 KRTAP4-8Q9BYQ9 185 aa4.87□□□□□ -1.63
TRAJ42-201ENST00000390495 TMEM106CQ9BVX2 250 aa4.84□□□□□ -1.63
TRAJ42-201ENST00000390495 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.83□□□□□ -1.64
TRAJ42-201ENST00000390495 DOK7Q18PE1 504 aa4.83□□□□□ -1.64
TRAJ42-201ENST00000390495 KRTAP1-3Q8IUG1 177 aa4.82□□□□□ -1.64
TRAJ42-201ENST00000390495 L3MBTL3Q96JM7 780 aaPredicted RBP4.81□□□□□ -1.64
TRAJ42-201ENST00000390495 RIMBP2O15034 1052 aa4.8□□□□□ -1.64
TRAJ42-201ENST00000390495 KRTAP9-6A0A140TA67 174 aa4.79□□□□□ -1.64
TRAJ42-201ENST00000390495 GFRA3O60609 400 aa4.79□□□□□ -1.64
TRAJ42-201ENST00000390495 SGIP1Q9BQI5 828 aa4.79□□□□□ -1.64
TRAJ42-201ENST00000390495 KRTAP9-2Q9BYQ4 174 aa4.79□□□□□ -1.64
TRAJ42-201ENST00000390495 PCDHB13Q9Y5F0 798 aa4.77□□□□□ -1.65
TRAJ42-201ENST00000390495 TREML4Q6UXN2 200 aa4.76□□□□□ -1.65
TRAJ42-201ENST00000390495 LCE2AQ5TA79 106 aaPredicted RBP4.74□□□□□ -1.65
TRAJ42-201ENST00000390495 PDCD7Q8N8D1 485 aaKnown RBP4.72□□□□□ -1.65
TRAJ42-201ENST00000390495 KCTD12Q96CX2 325 aaKnown RBP4.71□□□□□ -1.66
TRAJ42-201ENST00000390495 XP32Q5T750 250 aa4.7□□□□□ -1.66
TRAJ42-201ENST00000390495 ZSWIM6Q9HCJ5 1215 aa4.7□□□□□ -1.66
TRAJ42-201ENST00000390495 PBX2P40425 430 aa4.69□□□□□ -1.66
TRAJ42-201ENST00000390495 INSM1Q01101 510 aaPredicted RBP4.69□□□□□ -1.66
TRAJ42-201ENST00000390495 IFNL1Q8IU54 200 aa4.69□□□□□ -1.66
TRAJ42-201ENST00000390495 NRG2O14511 850 aaPredicted RBP4.68□□□□□ -1.66
TRAJ42-201ENST00000390495 FOXD4L1Q9NU39 408 aa4.68□□□□□ -1.66
TRAJ42-201ENST00000390495 PSMG3-AS1Q96PY0 264 aa4.67□□□□□ -1.66
TRAJ42-201ENST00000390495 ATXN8OSP0DMR3 200 aa4.66□□□□□ -1.66
TRAJ42-201ENST00000390495 PTPN5P54829 565 aa4.65□□□□□ -1.67
TRAJ42-201ENST00000390495 GPR153Q6NV75 609 aa4.65□□□□□ -1.67
TRAJ42-201ENST00000390495 ADGRD1Q6QNK2 874 aa4.65□□□□□ -1.67
TRAJ42-201ENST00000390495 ANO8Q9HCE9 1232 aaPredicted RBP4.64□□□□□ -1.67
TRAJ42-201ENST00000390495 ZNF316A6NFI3 1004 aaPredicted RBP4.63□□□□□ -1.67
TRAJ42-201ENST00000390495 LCE3BQ5TA77 95 aa4.62□□□□□ -1.67
TRAJ42-201ENST00000390495 POTEEQ6S8J3 1075 aa4.62□□□□□ -1.67
TRAJ42-201ENST00000390495 AXIN2Q9Y2T1 843 aa4.61□□□□□ -1.67
TRAJ42-201ENST00000390495 KRTAP4-8A0A0G2JLE6 195 aa4.6□□□□□ -1.67
TRAJ42-201ENST00000390495 BTBD11A6QL63 1104 aa4.58□□□□□ -1.68
TRAJ42-201ENST00000390495 WIPF1O43516 503 aa4.58□□□□□ -1.68
TRAJ42-201ENST00000390495 HRO43593 1189 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms