RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 KANK4Q5T7N3 995 aaPredicted RBP27.7■■■□□ 2.03
ACTN4-202ENST00000390009 IFT140Q96RY7 1462 aa27.7■■■□□ 2.02
ACTN4-202ENST00000390009 AQRO60306 1485 aaKnown RBP eCLIP27.7■■■□□ 2.026e-8■■■■■ 42.5
ACTN4-202ENST00000390009 FHAD1B1AJZ9 1412 aa27.67■■■□□ 2.02
ACTN4-202ENST00000390009 THOC2Q8NI27 1593 aaKnown RBP27.65■■■□□ 2.02
ACTN4-202ENST00000390009 CCER1Q8TC90 406 aaPredicted RBP27.64■■■□□ 2.02
ACTN4-202ENST00000390009 MAP3K1Q13233 1512 aa27.63■■■□□ 2.01
ACTN4-202ENST00000390009 P3H3Q8IVL6 736 aa27.63■■■□□ 2.01
ACTN4-202ENST00000390009 ADAMTS12P58397 1594 aa27.63■■■□□ 2.01
ACTN4-202ENST00000390009 FHOD3Q2V2M9 1422 aa27.63■■■□□ 2.01
ACTN4-202ENST00000390009 TIAM1Q13009 1591 aa27.62■■■□□ 2.01
ACTN4-202ENST00000390009 GRIN2BQ13224 1484 aa27.62■■■□□ 2.01
ACTN4-202ENST00000390009 PCF11O94913 1555 aaKnown RBP27.61■■■□□ 2.01
ACTN4-202ENST00000390009 ZNF608Q9ULD9 1512 aaPredicted RBP27.61■■■□□ 2.01
ACTN4-202ENST00000390009 SAMD9Q5K651 1589 aa27.57■■■□□ 2
ACTN4-202ENST00000390009 HNRNPUL2Q1KMD3 747 aaKnown RBP27.56■■■□□ 2
ACTN4-202ENST00000390009 CFAP43Q8NDM7 1665 aa27.54■■■□□ 2
ACTN4-202ENST00000390009 FYCO1Q9BQS8 1478 aa27.52■■■□□ 2
ACTN4-202ENST00000390009 EIF4G3O43432 1585 aaKnown RBP27.52■■■□□ 2
ACTN4-202ENST00000390009 RRBP1Q9P2E9 1410 aaKnown RBP27.5■■□□□ 1.99
ACTN4-202ENST00000390009 CASKIN1Q8WXD9 1431 aa27.49■■□□□ 1.99
ACTN4-202ENST00000390009 FMN1Q68DA7 1419 aa27.49■■□□□ 1.99
ACTN4-202ENST00000390009 LRRC9Q6ZRR7 1453 aa27.48■■□□□ 1.99
ACTN4-202ENST00000390009 IQGAP2Q13576 1575 aa27.44■■□□□ 1.98
ACTN4-202ENST00000390009 SNAPC4Q5SXM2 1469 aa27.42■■□□□ 1.98
ACTN4-202ENST00000390009 ATP1B4Q9UN42 357 aaPredicted RBP27.41■■□□□ 1.98
ACTN4-202ENST00000390009 CCNB3Q8WWL7 1395 aa27.38■■□□□ 1.97
ACTN4-202ENST00000390009 LRRIQ1Q96JM4 1722 aa27.32■■□□□ 1.96
ACTN4-202ENST00000390009 MAGI1Q96QZ7 1491 aaPredicted RBP27.32■■□□□ 1.96
ACTN4-202ENST00000390009 GRIN2AQ12879 1464 aa27.32■■□□□ 1.96
ACTN4-202ENST00000390009 UGGT2Q9NYU1 1516 aa27.28■■□□□ 1.96
ACTN4-202ENST00000390009 PHLDB1Q86UU1 1377 aa27.28■■□□□ 1.96
ACTN4-202ENST00000390009 KIAA0586Q9BVV6 1533 aa27.26■■□□□ 1.96
ACTN4-202ENST00000390009 SYNJ2O15056 1496 aa27.23■■□□□ 1.95
ACTN4-202ENST00000390009 HECW1Q76N89 1606 aa27.17■■□□□ 1.94
ACTN4-202ENST00000390009 CHMP7Q8WUX9 453 aaPredicted RBP27.17■■□□□ 1.94
ACTN4-202ENST00000390009 MTUS2Q5JR59 1369 aa27.16■■□□□ 1.94
ACTN4-202ENST00000390009 KIAA0556O60303 1618 aa27.16■■□□□ 1.94
ACTN4-202ENST00000390009 CEP170Q5SW79 1584 aa27.16■■□□□ 1.94
ACTN4-202ENST00000390009 CCDC18Q5T9S5 1454 aa27.14■■□□□ 1.94
ACTN4-202ENST00000390009 DISP1Q96F81 1524 aa27.14■■□□□ 1.94
ACTN4-202ENST00000390009 ITGAEP38570 1179 aa27.13■■□□□ 1.93
ACTN4-202ENST00000390009 EHBP1L1Q8N3D4 1523 aa27.1■■□□□ 1.93
ACTN4-202ENST00000390009 SUPT6HQ7KZ85 1726 aaKnown RBP27.08■■□□□ 1.93
ACTN4-202ENST00000390009 FBLN2P98095 1184 aa27.08■■□□□ 1.93
ACTN4-202ENST00000390009 FAM50AQ14320 339 aaKnown RBP27.07■■□□□ 1.92
ACTN4-202ENST00000390009 NUP160Q12769 1436 aa27.06■■□□□ 1.92
ACTN4-202ENST00000390009 DHX57Q6P158 1386 aaKnown RBP27.06■■□□□ 1.92
ACTN4-202ENST00000390009 EPRSP07814 1512 aaKnown RBP27.06■■□□□ 1.92
ACTN4-202ENST00000390009 MAGI3Q5TCQ9 1506 aa27.04■■□□□ 1.92
ACTN4-202ENST00000390009 NCOA2Q15596 1464 aa27.04■■□□□ 1.92
ACTN4-202ENST00000390009 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.04■■□□□ 1.923e-6■■■□□ 14.7
ACTN4-202ENST00000390009 FGD6Q6ZV73 1430 aa27.04■■□□□ 1.92
ACTN4-202ENST00000390009 CLSPNQ9HAW4 1339 aa27■■□□□ 1.91
ACTN4-202ENST00000390009 CDK13Q14004 1512 aaKnown RBP26.99■■□□□ 1.91
ACTN4-202ENST00000390009 ARHGEF11O15085 1522 aa26.97■■□□□ 1.91
ACTN4-202ENST00000390009 RAPGEF6Q8TEU7 1601 aa26.97■■□□□ 1.91
ACTN4-202ENST00000390009 MYOM3Q5VTT5 1437 aa26.97■■□□□ 1.91
ACTN4-202ENST00000390009 RAB3GAP2Q9H2M9 1393 aa26.96■■□□□ 1.91
ACTN4-202ENST00000390009 SETD5Q9C0A6 1442 aa26.94■■□□□ 1.9
ACTN4-202ENST00000390009 JPH4Q96JJ6 628 aa26.91■■□□□ 1.9
ACTN4-202ENST00000390009 NUP153P49790 1475 aaKnown RBP26.91■■□□□ 1.9
ACTN4-202ENST00000390009 CARMIL2Q6F5E8 1435 aa26.9■■□□□ 1.9
ACTN4-202ENST00000390009 ARID3CA6NKF2 412 aa26.88■■□□□ 1.89
ACTN4-202ENST00000390009 PTPN23Q9H3S7 1636 aa26.87■■□□□ 1.89
ACTN4-202ENST00000390009 CHD1O14646 1710 aa26.86■■□□□ 1.89
ACTN4-202ENST00000390009 PLB1Q6P1J6 1458 aa26.81■■□□□ 1.88
ACTN4-202ENST00000390009 PTPRKQ15262 1439 aa26.78■■□□□ 1.88
ACTN4-202ENST00000390009 TCOF1Q13428 1488 aaKnown RBP26.78■■□□□ 1.88
ACTN4-202ENST00000390009 MAPKBP1O60336 1514 aa26.75■■□□□ 1.87
ACTN4-202ENST00000390009 MIA2Q96PC5 1412 aa26.74■■□□□ 1.87
ACTN4-202ENST00000390009 CDK11AQ9UQ88 783 aaPredicted RBP26.74■■□□□ 1.87
ACTN4-202ENST00000390009 HFM1A2PYH4 1435 aa26.71■■□□□ 1.87
ACTN4-202ENST00000390009 ABCA8O94911 1581 aa26.71■■□□□ 1.87
ACTN4-202ENST00000390009 ZNF316A6NFI3 1004 aaPredicted RBP26.71■■□□□ 1.87
ACTN4-202ENST00000390009 PRG4Q92954 1404 aaPredicted RBP26.69■■□□□ 1.86
ACTN4-202ENST00000390009 TROQ12816 1431 aaPredicted RBP26.67■■□□□ 1.86
ACTN4-202ENST00000390009 SHROOM2Q13796 1616 aa26.65■■□□□ 1.86
ACTN4-202ENST00000390009 NAIPQ13075 1403 aa26.64■■□□□ 1.85
ACTN4-202ENST00000390009 ADCY10Q96PN6 1610 aa26.64■■□□□ 1.85
ACTN4-202ENST00000390009 DIEXFQ68CQ4 756 aaKnown RBP26.62■■□□□ 1.85
ACTN4-202ENST00000390009 KIF14Q15058 1648 aa26.59■■□□□ 1.85
ACTN4-202ENST00000390009 GCC2Q8IWJ2 1684 aa26.59■■□□□ 1.85
ACTN4-202ENST00000390009 ITSN2Q9NZM3 1697 aa26.58■■□□□ 1.85
ACTN4-202ENST00000390009 PTPRGP23470 1445 aa26.58■■□□□ 1.85
ACTN4-202ENST00000390009 ATP10BO94823 1461 aa26.56■■□□□ 1.84
ACTN4-202ENST00000390009 AKNAQ7Z591 1439 aa26.55■■□□□ 1.84
ACTN4-202ENST00000390009 UACAQ9BZF9 1416 aa26.54■■□□□ 1.84
ACTN4-202ENST00000390009 DNMT1P26358 1616 aaKnown RBP26.53■■□□□ 1.84
ACTN4-202ENST00000390009 CHIC2Q9UKJ5 165 aa26.53■■□□□ 1.84
ACTN4-202ENST00000390009 RRP7BPQ9NSQ0 103 aa26.5■■□□□ 1.83
ACTN4-202ENST00000390009 DAPK1P53355 1430 aa26.5■■□□□ 1.83
ACTN4-202ENST00000390009 GPATCH8Q9UKJ3 1502 aaKnown RBP26.5■■□□□ 1.83
ACTN4-202ENST00000390009 PLEKHD1A6NEE1 506 aa26.49■■□□□ 1.83
ACTN4-202ENST00000390009 ZNF644Q9H582 1327 aaPredicted RBP26.48■■□□□ 1.83
ACTN4-202ENST00000390009 CLASP1Q7Z460 1538 aa26.47■■□□□ 1.83
ACTN4-202ENST00000390009 ERCC6L2Q5T890 1561 aa26.47■■□□□ 1.83
ACTN4-202ENST00000390009 SIN3AQ96ST3 1273 aa26.46■■□□□ 1.83
ACTN4-202ENST00000390009 CAMSAP2Q08AD1 1489 aa26.46■■□□□ 1.83
ACTN4-202ENST00000390009 ABCC5O15440 1437 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms