RNA–Protein interactions for RNA: ENST00000389418.8

PTPRN2-203, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-203ENST00000389418 CCDC88BA6NC98 1476 aa17.74■□□□□ 0.43
PTPRN2-203ENST00000389418 FAM9BQ8IZU0 186 aa17.72■□□□□ 0.43
PTPRN2-203ENST00000389418 CANXP27824 592 aaKnown RBP17.72■□□□□ 0.43
PTPRN2-203ENST00000389418 SCAF1Q9H7N4 1312 aaKnown RBP17.71■□□□□ 0.43
PTPRN2-203ENST00000389418 ARID4BQ4LE39 1312 aaPredicted RBP17.69■□□□□ 0.42
PTPRN2-203ENST00000389418 ATAD2BQ9ULI0 1458 aa17.68■□□□□ 0.42
PTPRN2-203ENST00000389418 WIZO95785 1651 aa17.67■□□□□ 0.42
PTPRN2-203ENST00000389418 RTL5Q5HYW3 569 aaPredicted RBP17.67■□□□□ 0.42
PTPRN2-203ENST00000389418 CFDP1Q9UEE9 299 aaPredicted RBP17.66■□□□□ 0.42
PTPRN2-203ENST00000389418 CEP164Q9UPV0 1460 aa17.65■□□□□ 0.42
PTPRN2-203ENST00000389418 TNIKQ9UKE5 1360 aa17.64■□□□□ 0.41
PTPRN2-203ENST00000389418 SMARCA4P51532 1647 aa17.64■□□□□ 0.41
PTPRN2-203ENST00000389418 TOP2AP11388 1531 aaKnown RBP17.64■□□□□ 0.41
PTPRN2-203ENST00000389418 TRHP20396 242 aaPredicted RBP17.63■□□□□ 0.41
PTPRN2-203ENST00000389418 HNRNPUQ00839 825 aaKnown RBP eCLIP17.62■□□□□ 0.41
PTPRN2-203ENST00000389418 SOGA1O94964 1423 aa17.61■□□□□ 0.41
PTPRN2-203ENST00000389418 A0A0G2JS52 829 aa17.61■□□□□ 0.41
PTPRN2-203ENST00000389418 ZBTB7CA1YPR0 619 aa17.6■□□□□ 0.41
PTPRN2-203ENST00000389418 MLECQ14165 292 aa17.59■□□□□ 0.41
PTPRN2-203ENST00000389418 TDRD9Q8NDG6 1382 aaKnown RBP17.59■□□□□ 0.41
PTPRN2-203ENST00000389418 PPP1R15AO75807 674 aaPredicted RBP17.57■□□□□ 0.4
PTPRN2-203ENST00000389418 PDS5BQ9NTI5 1447 aa17.56■□□□□ 0.4
PTPRN2-203ENST00000389418 C14orf37Q86TY3 774 aa17.56■□□□□ 0.4
PTPRN2-203ENST00000389418 MIER1Q8N108 512 aa17.55■□□□□ 0.4
PTPRN2-203ENST00000389418 CUX2O14529 1486 aa17.55■□□□□ 0.4
PTPRN2-203ENST00000389418 CADPSQ9ULU8 1353 aa17.55■□□□□ 0.4
PTPRN2-203ENST00000389418 FKBP8Q14318 412 aa17.54■□□□□ 0.4
PTPRN2-203ENST00000389418 SIN3AQ96ST3 1273 aa17.53■□□□□ 0.4
PTPRN2-203ENST00000389418 TMC1Q8TDI8 760 aa17.52■□□□□ 0.4
PTPRN2-203ENST00000389418 CARMIL1Q5VZK9 1371 aa17.49■□□□□ 0.39
PTPRN2-203ENST00000389418 EIF4G1Q04637 1599 aaKnown RBP17.48■□□□□ 0.39
PTPRN2-203ENST00000389418 FHAD1B1AJZ9 1412 aa17.48■□□□□ 0.39
PTPRN2-203ENST00000389418 ABCC8Q09428 1581 aa17.48■□□□□ 0.39
PTPRN2-203ENST00000389418 MRS2Q9HD23 443 aa17.47■□□□□ 0.39
PTPRN2-203ENST00000389418 IRX6P78412 446 aaPredicted RBP17.46■□□□□ 0.38
PTPRN2-203ENST00000389418 EIF4G2P78344 907 aaKnown RBP eCLIP17.45■□□□□ 0.38
PTPRN2-203ENST00000389418 NPM2Q86SE8 214 aaKnown RBP17.44■□□□□ 0.38
PTPRN2-203ENST00000389418 PPM1GO15355 546 aaPredicted RBP17.41■□□□□ 0.38
PTPRN2-203ENST00000389418 KANK4Q5T7N3 995 aaPredicted RBP17.4■□□□□ 0.38
PTPRN2-203ENST00000389418 NCAPD3P42695 1498 aa17.39■□□□□ 0.37
PTPRN2-203ENST00000389418 LMOD2Q6P5Q4 547 aa17.39■□□□□ 0.37
PTPRN2-203ENST00000389418 WDR43Q15061 677 aaKnown RBP eCLIP17.39■□□□□ 0.37
PTPRN2-203ENST00000389418 FOXD1Q16676 465 aa17.39■□□□□ 0.37
PTPRN2-203ENST00000389418 CDCA8Q53HL2 280 aa17.38■□□□□ 0.37
PTPRN2-203ENST00000389418 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.38■□□□□ 0.37
PTPRN2-203ENST00000389418 GGT6Q6P531 493 aa17.38■□□□□ 0.37
PTPRN2-203ENST00000389418 TNNT2P45379 298 aaPredicted RBP17.35■□□□□ 0.37
PTPRN2-203ENST00000389418 SAFB2Q14151 953 aaKnown RBP eCLIP17.35■□□□□ 0.37
PTPRN2-203ENST00000389418 ANP32AP39687 249 aaKnown RBP17.33■□□□□ 0.36
PTPRN2-203ENST00000389418 CCNB3Q8WWL7 1395 aa17.32■□□□□ 0.36
PTPRN2-203ENST00000389418 CARD11Q9BXL7 1154 aa17.32■□□□□ 0.36
PTPRN2-203ENST00000389418 SOX12O15370 315 aa17.3■□□□□ 0.36
PTPRN2-203ENST00000389418 NEUROD2Q15784 382 aa17.3■□□□□ 0.36
PTPRN2-203ENST00000389418 CARMIL2Q6F5E8 1435 aa17.28■□□□□ 0.36
PTPRN2-203ENST00000389418 FANCD2Q9BXW9 1451 aa17.28■□□□□ 0.36
PTPRN2-203ENST00000389418 HAP1P54257 671 aaPredicted RBP17.27■□□□□ 0.36
PTPRN2-203ENST00000389418 UPF2Q9HAU5 1272 aaKnown RBP17.27■□□□□ 0.36
PTPRN2-203ENST00000389418 CCDC136Q96JN2 1154 aa17.26■□□□□ 0.35
PTPRN2-203ENST00000389418 DCAF11Q8TEB1 546 aa17.26■□□□□ 0.35
PTPRN2-203ENST00000389418 VPS8Q8N3P4 1428 aa17.25■□□□□ 0.35
PTPRN2-203ENST00000389418 POGKQ9P215 609 aa17.24■□□□□ 0.35
PTPRN2-203ENST00000389418 TIMELESSQ9UNS1 1208 aa17.23■□□□□ 0.35
PTPRN2-203ENST00000389418 BICRAQ9NZM4 1560 aa17.22■□□□□ 0.35
PTPRN2-203ENST00000389418 ARXQ96QS3 562 aa17.21■□□□□ 0.35
PTPRN2-203ENST00000389418 CFAP53Q96M91 514 aa17.21■□□□□ 0.35
PTPRN2-203ENST00000389418 CYB5RLQ6IPT4 315 aa17.2■□□□□ 0.34
PTPRN2-203ENST00000389418 STK26Q9P289 416 aa17.2■□□□□ 0.34
PTPRN2-203ENST00000389418 KANK1Q14678 1352 aa17.19■□□□□ 0.34
PTPRN2-203ENST00000389418 NUTM2DQ5VT03 806 aaPredicted RBP17.18■□□□□ 0.34
PTPRN2-203ENST00000389418 FMN1Q68DA7 1419 aa17.18■□□□□ 0.34
PTPRN2-203ENST00000389418 CC2D1BQ5T0F9 858 aaKnown RBP17.17■□□□□ 0.34
PTPRN2-203ENST00000389418 KNSTRNQ9Y448 316 aa17.16■□□□□ 0.34
PTPRN2-203ENST00000389418 HDGFP51858 240 aaKnown RBP17.16■□□□□ 0.34
PTPRN2-203ENST00000389418 HNRNPMP52272 730 aaKnown RBP eCLIP17.16■□□□□ 0.344e-7■■■■■ 27.1
PTPRN2-203ENST00000389418 JPH4Q96JJ6 628 aa17.16■□□□□ 0.34
PTPRN2-203ENST00000389418 PKD2Q13563 968 aa17.15■□□□□ 0.34
PTPRN2-203ENST00000389418 CC2D2AQ9P2K1 1620 aa17.14■□□□□ 0.33
PTPRN2-203ENST00000389418 FHOD3Q2V2M9 1422 aa17.13■□□□□ 0.33
PTPRN2-203ENST00000389418 LAS1LQ9Y4W2 734 aaKnown RBP17.13■□□□□ 0.33
PTPRN2-203ENST00000389418 RUSC2Q8N2Y8 1516 aa17.13■□□□□ 0.33
PTPRN2-203ENST00000389418 HSP90AA1P07900 732 aaKnown RBP17.12■□□□□ 0.33
PTPRN2-203ENST00000389418 MYH16Q9H6N6 1097 aa17.11■□□□□ 0.33
PTPRN2-203ENST00000389418 ARHGAP35Q9NRY4 1499 aa17.1■□□□□ 0.33
PTPRN2-203ENST00000389418 KIF3BO15066 747 aa17.1■□□□□ 0.33
PTPRN2-203ENST00000389418 HMGXB3Q12766 1538 aa17.08■□□□□ 0.32
PTPRN2-203ENST00000389418 EFCAB2Q5VUJ9 269 aa17.08■□□□□ 0.32
PTPRN2-203ENST00000389418 U2SURPO15042 1029 aaKnown RBP17.07■□□□□ 0.32
PTPRN2-203ENST00000389418 SETD5Q9C0A6 1442 aa17.07■□□□□ 0.32
PTPRN2-203ENST00000389418 SRPK2P78362 688 aaKnown RBP17.07■□□□□ 0.32
PTPRN2-203ENST00000389418 RAPGEF2Q9Y4G8 1499 aa17.06■□□□□ 0.32
PTPRN2-203ENST00000389418 NUDCQ9Y266 331 aa17.06■□□□□ 0.32
PTPRN2-203ENST00000389418 NUTM2FA1L443 756 aa17.06■□□□□ 0.32
PTPRN2-203ENST00000389418 CFTRP13569 1480 aa17.06■□□□□ 0.32
PTPRN2-203ENST00000389418 SUPT16HQ9Y5B9 1047 aaKnown RBP17.05■□□□□ 0.32
PTPRN2-203ENST00000389418 RSPH4AQ5TD94 716 aa17.04■□□□□ 0.32
PTPRN2-203ENST00000389418 FGD5Q6ZNL6 1462 aa17.03■□□□□ 0.32
PTPRN2-203ENST00000389418 ANP32BQ92688 251 aaKnown RBP17.02■□□□□ 0.31
PTPRN2-203ENST00000389418 NUP155O75694 1391 aa17.01■□□□□ 0.31
PTPRN2-203ENST00000389418 TMF1P82094 1093 aa17.01■□□□□ 0.31
PTPRN2-203ENST00000389418 RAB3GAP2Q9H2M9 1393 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms