RNA–Protein interactions for RNA: ENST00000389385.8

RPH3A-201, Transcript of rabphilin 3A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RPH3A, Length 4,679 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3A-201ENST00000389385 MRS2Q9HD23 443 aa15.36■□□□□ 0.05
RPH3A-201ENST00000389385 TNIKQ9UKE5 1360 aa15.36■□□□□ 0.05
RPH3A-201ENST00000389385 TMC1Q8TDI8 760 aa15.34■□□□□ 0.05
RPH3A-201ENST00000389385 CEP164Q9UPV0 1460 aa15.34■□□□□ 0.05
RPH3A-201ENST00000389385 SALL2Q9Y467 1007 aaPredicted RBP15.32■□□□□ 0.04
RPH3A-201ENST00000389385 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.31■□□□□ 0.04
RPH3A-201ENST00000389385 TSPY4P0CV99 314 aa15.3■□□□□ 0.04
RPH3A-201ENST00000389385 TSPY10P0CW01 314 aa15.3■□□□□ 0.04
RPH3A-201ENST00000389385 CCDC88BA6NC98 1476 aa15.3■□□□□ 0.04
RPH3A-201ENST00000389385 ARXQ96QS3 562 aa15.29■□□□□ 0.04
RPH3A-201ENST00000389385 SOGA1O94964 1423 aa15.27■□□□□ 0.03
RPH3A-201ENST00000389385 DDRGK1Q96HY6 314 aa15.25■□□□□ 0.03
RPH3A-201ENST00000389385 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.25■□□□□ 0.03
RPH3A-201ENST00000389385 CHGAP10645 457 aaKnown RBP15.23■□□□□ 0.03
RPH3A-201ENST00000389385 SUPT16HQ9Y5B9 1047 aaKnown RBP15.22■□□□□ 0.03
RPH3A-201ENST00000389385 SMARCA2P51531 1590 aa15.21■□□□□ 0.03
RPH3A-201ENST00000389385 PLEKHD1A6NEE1 506 aa15.21■□□□□ 0.03
RPH3A-201ENST00000389385 HIRIP3Q9BW71 556 aaPredicted RBP15.21■□□□□ 0.03
RPH3A-201ENST00000389385 RRP7BPQ9NSQ0 103 aa15.21■□□□□ 0.03
RPH3A-201ENST00000389385 ESF1Q9H501 851 aaKnown RBP15.21■□□□□ 0.03
RPH3A-201ENST00000389385 PPM1GO15355 546 aaPredicted RBP15.2■□□□□ 0.02
RPH3A-201ENST00000389385 SLC24A1O60721 1099 aa15.2■□□□□ 0.02
RPH3A-201ENST00000389385 CUX2O14529 1486 aa15.2■□□□□ 0.02
RPH3A-201ENST00000389385 ERICH6BQ5W0A0 696 aa15.19■□□□□ 0.02
RPH3A-201ENST00000389385 CARMIL1Q5VZK9 1371 aa15.18■□□□□ 0.02
RPH3A-201ENST00000389385 KCNH8Q96L42 1107 aa15.18■□□□□ 0.02
RPH3A-201ENST00000389385 ABCC8Q09428 1581 aa15.18■□□□□ 0.02
RPH3A-201ENST00000389385 EIF4G2P78344 907 aaKnown RBP eCLIP15.17■□□□□ 0.02
RPH3A-201ENST00000389385 BECN1Q14457 450 aa15.17■□□□□ 0.02
RPH3A-201ENST00000389385 WIZO95785 1651 aa15.16■□□□□ 0.02
RPH3A-201ENST00000389385 TRIM44Q96DX7 344 aaPredicted RBP15.16■□□□□ 0.02
RPH3A-201ENST00000389385 WDR43Q15061 677 aaKnown RBP eCLIP15.15■□□□□ 0.02
RPH3A-201ENST00000389385 STAG3Q9UJ98 1225 aa15.14■□□□□ 0.01
RPH3A-201ENST00000389385 PPP4R2Q9NY27 417 aa15.14■□□□□ 0.01
RPH3A-201ENST00000389385 NOP58Q9Y2X3 529 aaKnown RBP15.13■□□□□ 0.01
RPH3A-201ENST00000389385 AEBP2Q6ZN18 517 aaPredicted RBP15.13■□□□□ 0.01
RPH3A-201ENST00000389385 TOP2AP11388 1531 aaKnown RBP15.12■□□□□ 0.01
RPH3A-201ENST00000389385 KDM2AQ9Y2K7 1162 aa15.12■□□□□ 0.01
RPH3A-201ENST00000389385 CFDP1Q9UEE9 299 aaPredicted RBP15.12■□□□□ 0.01
RPH3A-201ENST00000389385 DNAJC5BQ9UF47 199 aa15.11■□□□□ 0.01
RPH3A-201ENST00000389385 RTN4Q9NQC3 1192 aaKnown RBP15.1■□□□□ 0.01
RPH3A-201ENST00000389385 ATAD2BQ9ULI0 1458 aa15.07■□□□□ 0
RPH3A-201ENST00000389385 FHAD1B1AJZ9 1412 aa15.07■□□□□ 0
RPH3A-201ENST00000389385 PLPPR3Q6T4P5 718 aa15.05■□□□□ 0
RPH3A-201ENST00000389385 LAS1LQ9Y4W2 734 aaKnown RBP15.05■□□□□ 0
RPH3A-201ENST00000389385 PDS5BQ9NTI5 1447 aa15.05■□□□□ 0
RPH3A-201ENST00000389385 RBM19Q9Y4C8 960 aaKnown RBP15.05■□□□□ 0
RPH3A-201ENST00000389385 DEKP35659 375 aaKnown RBP15.05■□□□□ -0
RPH3A-201ENST00000389385 GOLGA6L22H0YM25 854 aa15.04■□□□□ -0
RPH3A-201ENST00000389385 TNNT2P45379 298 aaPredicted RBP15.04■□□□□ -0
RPH3A-201ENST00000389385 CADPSQ9ULU8 1353 aa15.03■□□□□ -0
RPH3A-201ENST00000389385 TDRD9Q8NDG6 1382 aaKnown RBP15.03■□□□□ -0
RPH3A-201ENST00000389385 SMARCA4P51532 1647 aa15.01□□□□□ -0.01
RPH3A-201ENST00000389385 NAP1L5Q96NT1 182 aaPredicted RBP15.01□□□□□ -0.01
RPH3A-201ENST00000389385 VPS8Q8N3P4 1428 aa15□□□□□ -0.01
RPH3A-201ENST00000389385 EIF4G1Q04637 1599 aaKnown RBP15□□□□□ -0.01
RPH3A-201ENST00000389385 CCNB3Q8WWL7 1395 aa15□□□□□ -0.01
RPH3A-201ENST00000389385 B4GALNT3Q6L9W6 998 aa14.98□□□□□ -0.01
RPH3A-201ENST00000389385 RGL3Q3MIN7 710 aa14.97□□□□□ -0.01
RPH3A-201ENST00000389385 MYH16Q9H6N6 1097 aa14.96□□□□□ -0.01
RPH3A-201ENST00000389385 OSCARQ8IYS5 282 aa14.96□□□□□ -0.01
RPH3A-201ENST00000389385 NCLP19338 710 aaKnown RBP14.95□□□□□ -0.02
RPH3A-201ENST00000389385 KANK4Q5T7N3 995 aaPredicted RBP14.95□□□□□ -0.02
RPH3A-201ENST00000389385 SIN3AQ96ST3 1273 aa14.94□□□□□ -0.02
RPH3A-201ENST00000389385 TSHZ2Q9NRE2 1034 aa14.93□□□□□ -0.02
RPH3A-201ENST00000389385 PTMAP06454 111 aaKnown RBP14.92□□□□□ -0.02
RPH3A-201ENST00000389385 SENP3-EIF4A1A0A087X0R7 540 aa14.92□□□□□ -0.02
RPH3A-201ENST00000389385 CCER2I3L3R5 266 aa14.91□□□□□ -0.02
RPH3A-201ENST00000389385 DNTTIP2Q5QJE6 756 aaKnown RBP14.89□□□□□ -0.03
RPH3A-201ENST00000389385 RGS3P49796 1198 aa14.89□□□□□ -0.03
RPH3A-201ENST00000389385 SENP3Q9H4L4 574 aaPredicted RBP14.87□□□□□ -0.03
RPH3A-201ENST00000389385 RAPGEF2Q9Y4G8 1499 aa14.85□□□□□ -0.03
RPH3A-201ENST00000389385 TIMELESSQ9UNS1 1208 aa14.84□□□□□ -0.03
RPH3A-201ENST00000389385 FMN1Q68DA7 1419 aa14.84□□□□□ -0.03
RPH3A-201ENST00000389385 L1TD1Q5T7N2 865 aaKnown RBP14.84□□□□□ -0.03
RPH3A-201ENST00000389385 RUSC2Q8N2Y8 1516 aa14.83□□□□□ -0.03
RPH3A-201ENST00000389385 CARMIL2Q6F5E8 1435 aa14.83□□□□□ -0.03
RPH3A-201ENST00000389385 ARHGAP35Q9NRY4 1499 aa14.83□□□□□ -0.04
RPH3A-201ENST00000389385 CARD11Q9BXL7 1154 aa14.82□□□□□ -0.04
RPH3A-201ENST00000389385 PPP1R15AO75807 674 aaPredicted RBP14.81□□□□□ -0.04
RPH3A-201ENST00000389385 FANCD2Q9BXW9 1451 aa14.8□□□□□ -0.04
RPH3A-201ENST00000389385 CYB5RLQ6IPT4 315 aa14.8□□□□□ -0.04
RPH3A-201ENST00000389385 KNSTRNQ9Y448 316 aa14.8□□□□□ -0.04
RPH3A-201ENST00000389385 SETD5Q9C0A6 1442 aa14.79□□□□□ -0.04
RPH3A-201ENST00000389385 FTSJ3Q8IY81 847 aaKnown RBP14.78□□□□□ -0.04
RPH3A-201ENST00000389385 FHOD3Q2V2M9 1422 aa14.78□□□□□ -0.04
RPH3A-201ENST00000389385 CDCA8Q53HL2 280 aa14.78□□□□□ -0.04
RPH3A-201ENST00000389385 ARID4BQ4LE39 1312 aaPredicted RBP14.77□□□□□ -0.05
RPH3A-201ENST00000389385 CFAP53Q96M91 514 aa14.76□□□□□ -0.05
RPH3A-201ENST00000389385 CASC1Q6TDU7 716 aa14.74□□□□□ -0.05
RPH3A-201ENST00000389385 HSP90AB1P08238 724 aaKnown RBP14.74□□□□□ -0.05
RPH3A-201ENST00000389385 NCAPD3P42695 1498 aa14.73□□□□□ -0.05
RPH3A-201ENST00000389385 CDK11BP21127 795 aaKnown RBP14.72□□□□□ -0.05
RPH3A-201ENST00000389385 JPH4Q96JJ6 628 aa14.72□□□□□ -0.05
RPH3A-201ENST00000389385 TCERG1O14776 1098 aaKnown RBP14.72□□□□□ -0.05
RPH3A-201ENST00000389385 MSNP26038 577 aaKnown RBP14.72□□□□□ -0.05
RPH3A-201ENST00000389385 DCAF11Q8TEB1 546 aa14.72□□□□□ -0.05
RPH3A-201ENST00000389385 FRAT1Q92837 279 aaPredicted RBP14.72□□□□□ -0.05
RPH3A-201ENST00000389385 RAB3GAP2Q9H2M9 1393 aa14.72□□□□□ -0.05
RPH3A-201ENST00000389385 PNNQ9H307 717 aaKnown RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms