RNA–Protein interactions for RNA: ENST00000383801.6

SEC13-203, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2 BASIC

Gene SEC13, Length 1,479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-203ENST00000383801 RANGAP1P46060 587 aaPredicted RBP20.91■□□□□ 0.94
SEC13-203ENST00000383801 MAP3K1Q13233 1512 aa20.9■□□□□ 0.94
SEC13-203ENST00000383801 ZNF608Q9ULD9 1512 aaPredicted RBP20.89■□□□□ 0.93
SEC13-203ENST00000383801 EIF4G3O43432 1585 aaKnown RBP20.87■□□□□ 0.93
SEC13-203ENST00000383801 MAGI1Q96QZ7 1491 aaPredicted RBP20.86■□□□□ 0.93
SEC13-203ENST00000383801 HRCP23327 699 aa20.85■□□□□ 0.93
SEC13-203ENST00000383801 PPARGC1BQ86YN6 1023 aaKnown RBP20.85■□□□□ 0.93
SEC13-203ENST00000383801 SAMD9Q5K651 1589 aa20.81■□□□□ 0.92
SEC13-203ENST00000383801 FMN1Q68DA7 1419 aa20.8■□□□□ 0.92
SEC13-203ENST00000383801 SNAPC4Q5SXM2 1469 aa20.78■□□□□ 0.92
SEC13-203ENST00000383801 IQGAP2Q13576 1575 aa20.76■□□□□ 0.91
SEC13-203ENST00000383801 SYNJ2O15056 1496 aa20.75■□□□□ 0.91
SEC13-203ENST00000383801 KIAA0586Q9BVV6 1533 aa20.75■□□□□ 0.91
SEC13-203ENST00000383801 CASKIN1Q8WXD9 1431 aa20.74■□□□□ 0.91
SEC13-203ENST00000383801 GRIN2AQ12879 1464 aa20.74■□□□□ 0.91
SEC13-203ENST00000383801 FYCO1Q9BQS8 1478 aa20.74■□□□□ 0.91
SEC13-203ENST00000383801 ZEB1P37275 1124 aaPredicted RBP20.72■□□□□ 0.91
SEC13-203ENST00000383801 TIAM1Q13009 1591 aa20.71■□□□□ 0.91
SEC13-203ENST00000383801 UGGT2Q9NYU1 1516 aa20.71■□□□□ 0.91
SEC13-203ENST00000383801 FHOD3Q2V2M9 1422 aa20.7■□□□□ 0.9
SEC13-203ENST00000383801 CHMP7Q8WUX9 453 aaPredicted RBP20.67■□□□□ 0.9
SEC13-203ENST00000383801 PCF11O94913 1555 aaKnown RBP20.66■□□□□ 0.9
SEC13-203ENST00000383801 CFAP43Q8NDM7 1665 aa20.65■□□□□ 0.9
SEC13-203ENST00000383801 KANK4Q5T7N3 995 aaPredicted RBP20.64■□□□□ 0.89
SEC13-203ENST00000383801 P3H3Q8IVL6 736 aa20.64■□□□□ 0.89
SEC13-203ENST00000383801 LRRC9Q6ZRR7 1453 aa20.63■□□□□ 0.89
SEC13-203ENST00000383801 NUP160Q12769 1436 aa20.62■□□□□ 0.89
SEC13-203ENST00000383801 TTBK1Q5TCY1 1321 aaPredicted RBP20.61■□□□□ 0.89
SEC13-203ENST00000383801 RRBP1Q9P2E9 1410 aaKnown RBP20.6■□□□□ 0.89
SEC13-203ENST00000383801 CCDC18Q5T9S5 1454 aa20.55■□□□□ 0.88
SEC13-203ENST00000383801 CEP170Q5SW79 1584 aa20.54■□□□□ 0.88
SEC13-203ENST00000383801 KIAA0556O60303 1618 aa20.53■□□□□ 0.88
SEC13-203ENST00000383801 DISP1Q96F81 1524 aa20.52■□□□□ 0.88
SEC13-203ENST00000383801 HECW1Q76N89 1606 aa20.51■□□□□ 0.87
SEC13-203ENST00000383801 CARMIL2Q6F5E8 1435 aa20.5■□□□□ 0.87
SEC13-203ENST00000383801 CCNB3Q8WWL7 1395 aa20.49■□□□□ 0.87
SEC13-203ENST00000383801 FBLN2P98095 1184 aa20.48■□□□□ 0.87
SEC13-203ENST00000383801 ATP1B4Q9UN42 357 aaPredicted RBP20.48■□□□□ 0.87
SEC13-203ENST00000383801 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.47■□□□□ 0.871e-6■■■■□ 25.4
SEC13-203ENST00000383801 JPH4Q96JJ6 628 aa20.46■□□□□ 0.87
SEC13-203ENST00000383801 EHBP1L1Q8N3D4 1523 aa20.42■□□□□ 0.86
SEC13-203ENST00000383801 MTUS2Q5JR59 1369 aa20.42■□□□□ 0.86
SEC13-203ENST00000383801 LRRIQ1Q96JM4 1722 aa20.42■□□□□ 0.86
SEC13-203ENST00000383801 EPRSP07814 1512 aaKnown RBP20.4■□□□□ 0.86
SEC13-203ENST00000383801 CCER1Q8TC90 406 aaPredicted RBP20.39■□□□□ 0.85
SEC13-203ENST00000383801 PHLDB1Q86UU1 1377 aa20.38■□□□□ 0.85
SEC13-203ENST00000383801 SUPT6HQ7KZ85 1726 aaKnown RBP20.37■□□□□ 0.85
SEC13-203ENST00000383801 HNRNPUL2Q1KMD3 747 aaKnown RBP20.37■□□□□ 0.85
SEC13-203ENST00000383801 CHD1O14646 1710 aa20.37■□□□□ 0.85
SEC13-203ENST00000383801 RAPGEF6Q8TEU7 1601 aa20.37■□□□□ 0.85
SEC13-203ENST00000383801 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.34■□□□□ 0.85
SEC13-203ENST00000383801 CDK11AQ9UQ88 783 aaPredicted RBP20.33■□□□□ 0.85
SEC13-203ENST00000383801 ARHGEF11O15085 1522 aa20.33■□□□□ 0.84
SEC13-203ENST00000383801 SHROOM2Q13796 1616 aa20.31■□□□□ 0.84
SEC13-203ENST00000383801 NCOA2Q15596 1464 aa20.3■□□□□ 0.84
SEC13-203ENST00000383801 CLSPNQ9HAW4 1339 aa20.3■□□□□ 0.84
SEC13-203ENST00000383801 NUP153P49790 1475 aaKnown RBP20.29■□□□□ 0.84
SEC13-203ENST00000383801 MYOM3Q5VTT5 1437 aa20.28■□□□□ 0.84
SEC13-203ENST00000383801 FGD6Q6ZV73 1430 aa20.28■□□□□ 0.84
SEC13-203ENST00000383801 PRG4Q92954 1404 aaPredicted RBP20.26■□□□□ 0.83
SEC13-203ENST00000383801 ABCA8O94911 1581 aa20.24■□□□□ 0.83
SEC13-203ENST00000383801 MAGI3Q5TCQ9 1506 aa20.24■□□□□ 0.83
SEC13-203ENST00000383801 MIA2Q96PC5 1412 aa20.24■□□□□ 0.83
SEC13-203ENST00000383801 CDK13Q14004 1512 aaKnown RBP20.22■□□□□ 0.83
SEC13-203ENST00000383801 PTPRGP23470 1445 aa20.21■□□□□ 0.83
SEC13-203ENST00000383801 CLASP1Q7Z460 1538 aa20.2■□□□□ 0.82
SEC13-203ENST00000383801 PLB1Q6P1J6 1458 aa20.2■□□□□ 0.82
SEC13-203ENST00000383801 FAM50AQ14320 339 aaKnown RBP20.19■□□□□ 0.82
SEC13-203ENST00000383801 TCOF1Q13428 1488 aaKnown RBP20.19■□□□□ 0.82
SEC13-203ENST00000383801 TROQ12816 1431 aaPredicted RBP20.18■□□□□ 0.82
SEC13-203ENST00000383801 SETD5Q9C0A6 1442 aa20.16■□□□□ 0.82
SEC13-203ENST00000383801 PTPN23Q9H3S7 1636 aa20.15■□□□□ 0.82
SEC13-203ENST00000383801 ADCY10Q96PN6 1610 aa20.14■□□□□ 0.82
SEC13-203ENST00000383801 ACIN1Q9UKV3 1341 aaKnown RBP20.11■□□□□ 0.81
SEC13-203ENST00000383801 UACAQ9BZF9 1416 aa20.11■□□□□ 0.81
SEC13-203ENST00000383801 ATP10BO94823 1461 aa20.11■□□□□ 0.81
SEC13-203ENST00000383801 PLEKHD1A6NEE1 506 aa20.11■□□□□ 0.81
SEC13-203ENST00000383801 DHX57Q6P158 1386 aaKnown RBP20.09■□□□□ 0.81
SEC13-203ENST00000383801 ITGAEP38570 1179 aa20.09■□□□□ 0.81
SEC13-203ENST00000383801 RAB3GAP2Q9H2M9 1393 aa20.08■□□□□ 0.8
SEC13-203ENST00000383801 ITSN2Q9NZM3 1697 aa20.07■□□□□ 0.8
SEC13-203ENST00000383801 AKNAQ7Z591 1439 aa20.05■□□□□ 0.8
SEC13-203ENST00000383801 UHRF1BP1LA0JNW5 1464 aa20.05■□□□□ 0.8
SEC13-203ENST00000383801 HFM1A2PYH4 1435 aa20.05■□□□□ 0.8
SEC13-203ENST00000383801 ABCC2Q92887 1545 aa20.03■□□□□ 0.8
SEC13-203ENST00000383801 KIF14Q15058 1648 aa20.01■□□□□ 0.79
SEC13-203ENST00000383801 ARID3CA6NKF2 412 aa20.01■□□□□ 0.79
SEC13-203ENST00000383801 GPATCH8Q9UKJ3 1502 aaKnown RBP19.99■□□□□ 0.79
SEC13-203ENST00000383801 PTPRKQ15262 1439 aa19.98■□□□□ 0.79
SEC13-203ENST00000383801 ROCK1Q13464 1354 aa19.97■□□□□ 0.79
SEC13-203ENST00000383801 ABCC10Q5T3U5 1492 aa19.97■□□□□ 0.79
SEC13-203ENST00000383801 ERCC6L2Q5T890 1561 aa19.96■□□□□ 0.79
SEC13-203ENST00000383801 OSCARQ8IYS5 282 aa19.96■□□□□ 0.79
SEC13-203ENST00000383801 DNMT1P26358 1616 aaKnown RBP19.95■□□□□ 0.78
SEC13-203ENST00000383801 CFDP1Q9UEE9 299 aaPredicted RBP19.95■□□□□ 0.78
SEC13-203ENST00000383801 NAIPQ13075 1403 aa19.95■□□□□ 0.78
SEC13-203ENST00000383801 KDM5BQ9UGL1 1544 aa19.92■□□□□ 0.78
SEC13-203ENST00000383801 GCC2Q8IWJ2 1684 aa19.92■□□□□ 0.78
SEC13-203ENST00000383801 DAPK1P53355 1430 aa19.92■□□□□ 0.78
SEC13-203ENST00000383801 TIMELESSQ9UNS1 1208 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms