RNA–Protein interactions for RNA: ENST00000381873.7

SNPH-202, Transcript of syntaphilin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNPH, Length 4,995 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-202ENST00000381873 HNRNPUQ00839 825 aaKnown RBP eCLIP20.14■□□□□ 0.82
SNPH-202ENST00000381873 FAM9BQ8IZU0 186 aa20.12■□□□□ 0.81
SNPH-202ENST00000381873 WIZO95785 1651 aa20.12■□□□□ 0.81
SNPH-202ENST00000381873 CADPSQ9ULU8 1353 aa20.12■□□□□ 0.81
SNPH-202ENST00000381873 CUX2O14529 1486 aa20.11■□□□□ 0.81
SNPH-202ENST00000381873 TMC1Q8TDI8 760 aa20.1■□□□□ 0.81
SNPH-202ENST00000381873 KDM2AQ9Y2K7 1162 aa20.08■□□□□ 0.81
SNPH-202ENST00000381873 CARMIL1Q5VZK9 1371 aa20.08■□□□□ 0.81
SNPH-202ENST00000381873 FHAD1B1AJZ9 1412 aa20.08■□□□□ 0.8
SNPH-202ENST00000381873 SALL2Q9Y467 1007 aaPredicted RBP20.07■□□□□ 0.8
SNPH-202ENST00000381873 PLEKHD1A6NEE1 506 aa20.07■□□□□ 0.8
SNPH-202ENST00000381873 NPM2Q86SE8 214 aaKnown RBP20.06■□□□□ 0.8
SNPH-202ENST00000381873 FKBP8Q14318 412 aa20.03■□□□□ 0.8
SNPH-202ENST00000381873 HSP90AA1P07900 732 aaKnown RBP20.01■□□□□ 0.79
SNPH-202ENST00000381873 UPF2Q9HAU5 1272 aaKnown RBP20.01■□□□□ 0.79
SNPH-202ENST00000381873 WDR43Q15061 677 aaKnown RBP eCLIP20■□□□□ 0.79
SNPH-202ENST00000381873 ABCC8Q09428 1581 aa19.99■□□□□ 0.79
SNPH-202ENST00000381873 KCNH8Q96L42 1107 aa19.99■□□□□ 0.79
SNPH-202ENST00000381873 SOGA1O94964 1423 aa19.97■□□□□ 0.79
SNPH-202ENST00000381873 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.97■□□□□ 0.79
SNPH-202ENST00000381873 MRS2Q9HD23 443 aa19.96■□□□□ 0.79
SNPH-202ENST00000381873 RRP7BPQ9NSQ0 103 aa19.94■□□□□ 0.78
SNPH-202ENST00000381873 NCAPD3P42695 1498 aa19.91■□□□□ 0.78
SNPH-202ENST00000381873 SCAF1Q9H7N4 1312 aaKnown RBP19.9■□□□□ 0.78
SNPH-202ENST00000381873 PPP1R15AO75807 674 aaPredicted RBP19.9■□□□□ 0.78
SNPH-202ENST00000381873 EIF4G2P78344 907 aaKnown RBP eCLIP19.9■□□□□ 0.78
SNPH-202ENST00000381873 CCDC136Q96JN2 1154 aa19.9■□□□□ 0.78
SNPH-202ENST00000381873 ANP32BQ92688 251 aaKnown RBP19.87■□□□□ 0.77
SNPH-202ENST00000381873 CARMIL2Q6F5E8 1435 aa19.86■□□□□ 0.77
SNPH-202ENST00000381873 CFDP1Q9UEE9 299 aaPredicted RBP19.83■□□□□ 0.76
SNPH-202ENST00000381873 HIRIP3Q9BW71 556 aaPredicted RBP19.82■□□□□ 0.76
SNPH-202ENST00000381873 EIF4G1Q04637 1599 aaKnown RBP19.82■□□□□ 0.76
SNPH-202ENST00000381873 RGL3Q3MIN7 710 aa19.82■□□□□ 0.76
SNPH-202ENST00000381873 VPS8Q8N3P4 1428 aa19.8■□□□□ 0.76
SNPH-202ENST00000381873 A0A0G2JS52 829 aa19.8■□□□□ 0.76
SNPH-202ENST00000381873 FANCD2Q9BXW9 1451 aa19.8■□□□□ 0.76
SNPH-202ENST00000381873 SENP3Q9H4L4 574 aaPredicted RBP19.8■□□□□ 0.76
SNPH-202ENST00000381873 C14orf37Q86TY3 774 aa19.8■□□□□ 0.76
SNPH-202ENST00000381873 FMN1Q68DA7 1419 aa19.79■□□□□ 0.76
SNPH-202ENST00000381873 RAPGEF2Q9Y4G8 1499 aa19.77■□□□□ 0.76
SNPH-202ENST00000381873 PLEKHG5O94827 1062 aa19.75■□□□□ 0.75
SNPH-202ENST00000381873 MYH16Q9H6N6 1097 aa19.75■□□□□ 0.75
SNPH-202ENST00000381873 ARID4BQ4LE39 1312 aaPredicted RBP19.75■□□□□ 0.75
SNPH-202ENST00000381873 CCNB3Q8WWL7 1395 aa19.74■□□□□ 0.75
SNPH-202ENST00000381873 ZBTB7CA1YPR0 619 aa19.74■□□□□ 0.75
SNPH-202ENST00000381873 TDRD9Q8NDG6 1382 aaKnown RBP19.73■□□□□ 0.75
SNPH-202ENST00000381873 CDCA8Q53HL2 280 aa19.72■□□□□ 0.75
SNPH-202ENST00000381873 MIER1Q8N108 512 aa19.68■□□□□ 0.74
SNPH-202ENST00000381873 CFAP53Q96M91 514 aa19.68■□□□□ 0.74
SNPH-202ENST00000381873 HMGXB3Q12766 1538 aa19.66■□□□□ 0.74
SNPH-202ENST00000381873 KNSTRNQ9Y448 316 aa19.64■□□□□ 0.74
SNPH-202ENST00000381873 HAP1P54257 671 aaPredicted RBP19.64■□□□□ 0.73
SNPH-202ENST00000381873 ARHGAP35Q9NRY4 1499 aa19.63■□□□□ 0.73
SNPH-202ENST00000381873 CARD11Q9BXL7 1154 aa19.62■□□□□ 0.73
SNPH-202ENST00000381873 IRX6P78412 446 aaPredicted RBP19.61■□□□□ 0.73
SNPH-202ENST00000381873 PPM1GO15355 546 aaPredicted RBP19.59■□□□□ 0.73
SNPH-202ENST00000381873 TIMELESSQ9UNS1 1208 aa19.55■□□□□ 0.72
SNPH-202ENST00000381873 POGKQ9P215 609 aa19.55■□□□□ 0.72
SNPH-202ENST00000381873 CFTRP13569 1480 aa19.53■□□□□ 0.72
SNPH-202ENST00000381873 FGD5Q6ZNL6 1462 aa19.52■□□□□ 0.71
SNPH-202ENST00000381873 NUDCQ9Y266 331 aa19.51■□□□□ 0.71
SNPH-202ENST00000381873 KANK1Q14678 1352 aa19.5■□□□□ 0.71
SNPH-202ENST00000381873 LMOD2Q6P5Q4 547 aa19.5■□□□□ 0.71
SNPH-202ENST00000381873 ARXQ96QS3 562 aa19.49■□□□□ 0.71
SNPH-202ENST00000381873 EIF5BO60841 1220 aaKnown RBP19.48■□□□□ 0.71
SNPH-202ENST00000381873 MAPK8IP3Q9UPT6 1336 aa19.47■□□□□ 0.71
SNPH-202ENST00000381873 GAPVD1Q14C86 1478 aa19.47■□□□□ 0.71
SNPH-202ENST00000381873 NBR1Q14596 966 aa19.47■□□□□ 0.71
SNPH-202ENST00000381873 NEUROD2Q15784 382 aa19.47■□□□□ 0.71
SNPH-202ENST00000381873 CCDC18Q5T9S5 1454 aa19.46■□□□□ 0.71
SNPH-202ENST00000381873 RSPH4AQ5TD94 716 aa19.45■□□□□ 0.7
SNPH-202ENST00000381873 SENP3-EIF4A1A0A087X0R7 540 aa19.44■□□□□ 0.7
SNPH-202ENST00000381873 SIN3AQ96ST3 1273 aa19.44■□□□□ 0.7
SNPH-202ENST00000381873 SETD5Q9C0A6 1442 aa19.44■□□□□ 0.7
SNPH-202ENST00000381873 BECN1Q14457 450 aa19.44■□□□□ 0.7
SNPH-202ENST00000381873 EFCAB2Q5VUJ9 269 aa19.43■□□□□ 0.7
SNPH-202ENST00000381873 FTSJ3Q8IY81 847 aaKnown RBP19.43■□□□□ 0.7
SNPH-202ENST00000381873 JPH4Q96JJ6 628 aa19.43■□□□□ 0.7
SNPH-202ENST00000381873 CC2D2AQ9P2K1 1620 aa19.42■□□□□ 0.7
SNPH-202ENST00000381873 IGF1RP08069 1367 aa19.4■□□□□ 0.7
SNPH-202ENST00000381873 LAS1LQ9Y4W2 734 aaKnown RBP19.4■□□□□ 0.7
SNPH-202ENST00000381873 FHOD3Q2V2M9 1422 aa19.39■□□□□ 0.69
SNPH-202ENST00000381873 HDGFP51858 240 aaKnown RBP19.39■□□□□ 0.69
SNPH-202ENST00000381873 BICRAQ9NZM4 1560 aa19.38■□□□□ 0.69
SNPH-202ENST00000381873 NCLP19338 710 aaKnown RBP19.38■□□□□ 0.69
SNPH-202ENST00000381873 TRHP20396 242 aaPredicted RBP19.38■□□□□ 0.69
SNPH-202ENST00000381873 CDK11BP21127 795 aaKnown RBP19.37■□□□□ 0.69
SNPH-202ENST00000381873 TNNT2P45379 298 aaPredicted RBP19.37■□□□□ 0.69
SNPH-202ENST00000381873 DDRGK1Q96HY6 314 aa19.37■□□□□ 0.69
SNPH-202ENST00000381873 DCAF11Q8TEB1 546 aa19.36■□□□□ 0.69
SNPH-202ENST00000381873 ANKRD30AQ9BXX3 1397 aa19.36■□□□□ 0.69
SNPH-202ENST00000381873 MLECQ14165 292 aa19.35■□□□□ 0.69
SNPH-202ENST00000381873 GOLGA6L22H0YM25 854 aa19.34■□□□□ 0.69
SNPH-202ENST00000381873 MRC2Q9UBG0 1479 aa19.34■□□□□ 0.69
SNPH-202ENST00000381873 U2SURPO15042 1029 aaKnown RBP19.34■□□□□ 0.69
SNPH-202ENST00000381873 TMF1P82094 1093 aa19.34■□□□□ 0.69
SNPH-202ENST00000381873 SUPT16HQ9Y5B9 1047 aaKnown RBP19.34■□□□□ 0.69
SNPH-202ENST00000381873 KANK4Q5T7N3 995 aaPredicted RBP19.33■□□□□ 0.69
SNPH-202ENST00000381873 CASC1Q6TDU7 716 aa19.32■□□□□ 0.68
SNPH-202ENST00000381873 ERICH3Q5RHP9 1530 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 338.9 ms