RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 L1TD1Q5T7N2 865 aaKnown RBP14.71□□□□□ -0.05
PTCHD1-201ENST00000379361 P3H3Q8IVL6 736 aa14.71□□□□□ -0.06
PTCHD1-201ENST00000379361 NBR1Q14596 966 aa14.69□□□□□ -0.06
PTCHD1-201ENST00000379361 PLEKHG5O94827 1062 aa14.68□□□□□ -0.06
PTCHD1-201ENST00000379361 DNTTIP2Q5QJE6 756 aaKnown RBP14.68□□□□□ -0.06
PTCHD1-201ENST00000379361 PRM3Q9NNZ6 103 aa14.67□□□□□ -0.06
PTCHD1-201ENST00000379361 HNRNPUQ00839 825 aaKnown RBP eCLIP14.65□□□□□ -0.06
PTCHD1-201ENST00000379361 ARID4BQ4LE39 1312 aaPredicted RBP14.64□□□□□ -0.07
PTCHD1-201ENST00000379361 FAM9BQ8IZU0 186 aa14.64□□□□□ -0.07
PTCHD1-201ENST00000379361 FGD1P98174 961 aa14.63□□□□□ -0.07
PTCHD1-201ENST00000379361 KIAA2012Q0VF49 1180 aa14.63□□□□□ -0.07
PTCHD1-201ENST00000379361 SALL2Q9Y467 1007 aaPredicted RBP14.62□□□□□ -0.07
PTCHD1-201ENST00000379361 ABCC9O60706 1549 aa14.61□□□□□ -0.07
PTCHD1-201ENST00000379361 CHAF1AQ13111 956 aaPredicted RBP14.61□□□□□ -0.07
PTCHD1-201ENST00000379361 EIF4G2P78344 907 aaKnown RBP eCLIP14.6□□□□□ -0.07
PTCHD1-201ENST00000379361 FTSJ3Q8IY81 847 aaKnown RBP14.59□□□□□ -0.07
PTCHD1-201ENST00000379361 TSPY4P0CV99 314 aa14.59□□□□□ -0.07
PTCHD1-201ENST00000379361 TSPY10P0CW01 314 aa14.59□□□□□ -0.07
PTCHD1-201ENST00000379361 CHMP4BQ9H444 224 aaKnown RBP14.59□□□□□ -0.07
PTCHD1-201ENST00000379361 CFAP53Q96M91 514 aa14.58□□□□□ -0.08
PTCHD1-201ENST00000379361 FKBP8Q14318 412 aa14.57□□□□□ -0.08
PTCHD1-201ENST00000379361 CDCA8Q53HL2 280 aa14.56□□□□□ -0.08
PTCHD1-201ENST00000379361 OS9Q13438 667 aaPredicted RBP14.56□□□□□ -0.08
PTCHD1-201ENST00000379361 ACIN1Q9UKV3 1341 aaKnown RBP14.55□□□□□ -0.08
PTCHD1-201ENST00000379361 NOC3LQ8WTT2 800 aaKnown RBP14.55□□□□□ -0.08
PTCHD1-201ENST00000379361 TMX4Q9H1E5 349 aaPredicted RBP14.54□□□□□ -0.08
PTCHD1-201ENST00000379361 ISY1Q9ULR0 285 aaKnown RBP14.54□□□□□ -0.08
PTCHD1-201ENST00000379361 KCNJ4P48050 445 aa14.53□□□□□ -0.08
PTCHD1-201ENST00000379361 MRS2Q9HD23 443 aa14.52□□□□□ -0.09
PTCHD1-201ENST00000379361 TPRNQ4KMQ1 711 aa14.52□□□□□ -0.09
PTCHD1-201ENST00000379361 NAP1L2Q9ULW6 460 aaPredicted RBP14.51□□□□□ -0.09
PTCHD1-201ENST00000379361 KRI1Q8N9T8 703 aaKnown RBP14.51□□□□□ -0.09
PTCHD1-201ENST00000379361 KDM2AQ9Y2K7 1162 aa14.49□□□□□ -0.09
PTCHD1-201ENST00000379361 PNNQ9H307 717 aaKnown RBP14.49□□□□□ -0.09
PTCHD1-201ENST00000379361 PPM1GO15355 546 aaPredicted RBP14.49□□□□□ -0.09
PTCHD1-201ENST00000379361 TAOK2Q9UL54 1235 aa14.49□□□□□ -0.09
PTCHD1-201ENST00000379361 LMOD2Q6P5Q4 547 aa14.48□□□□□ -0.09
PTCHD1-201ENST00000379361 GON4LQ3T8J9 2241 aa14.47□□□□□ -0.09
PTCHD1-201ENST00000379361 GOLGA6L4A6NEF3 574 aa14.46□□□□□ -0.09
PTCHD1-201ENST00000379361 CHMP7Q8WUX9 453 aaPredicted RBP14.45□□□□□ -0.1
PTCHD1-201ENST00000379361 GNL2Q13823 731 aaKnown RBP14.45□□□□□ -0.1
PTCHD1-201ENST00000379361 MAPK8IP3Q9UPT6 1336 aa14.44□□□□□ -0.1
PTCHD1-201ENST00000379361 MCCP23508 829 aa14.43□□□□□ -0.1
PTCHD1-201ENST00000379361 NUDCQ9Y266 331 aa14.43□□□□□ -0.1
PTCHD1-201ENST00000379361 PLCB2Q00722 1185 aa14.42□□□□□ -0.1
PTCHD1-201ENST00000379361 MS4A1P11836 297 aa14.42□□□□□ -0.1
PTCHD1-201ENST00000379361 SENP3Q9H4L4 574 aaPredicted RBP14.41□□□□□ -0.1
PTCHD1-201ENST00000379361 KNSTRNQ9Y448 316 aa14.41□□□□□ -0.1
PTCHD1-201ENST00000379361 NAP1L5Q96NT1 182 aaPredicted RBP14.4□□□□□ -0.1
PTCHD1-201ENST00000379361 DDX10Q13206 875 aaKnown RBP14.4□□□□□ -0.1
PTCHD1-201ENST00000379361 USP35Q9P2H5 1018 aa14.39□□□□□ -0.11
PTCHD1-201ENST00000379361 MTUS2Q5JR59 1369 aa14.39□□□□□ -0.11
PTCHD1-201ENST00000379361 ERICH6BQ5W0A0 696 aa14.38□□□□□ -0.11
PTCHD1-201ENST00000379361 CHIC2Q9UKJ5 165 aa14.38□□□□□ -0.11
PTCHD1-201ENST00000379361 HSP90AB1P08238 724 aaKnown RBP14.37□□□□□ -0.11
PTCHD1-201ENST00000379361 CSRNP3Q8WYN3 585 aa14.37□□□□□ -0.11
PTCHD1-201ENST00000379361 CFAP44Q96MT7 982 aa14.36□□□□□ -0.11
PTCHD1-201ENST00000379361 CCDC34Q96HJ3 373 aa14.36□□□□□ -0.11
PTCHD1-201ENST00000379361 A0A0U1RQG5 324 aaPredicted RBP14.35□□□□□ -0.11
PTCHD1-201ENST00000379361 DRC7Q8IY82 874 aa14.35□□□□□ -0.11
PTCHD1-201ENST00000379361 LAS1LQ9Y4W2 734 aaKnown RBP14.35□□□□□ -0.11
PTCHD1-201ENST00000379361 POGKQ9P215 609 aa14.34□□□□□ -0.11
PTCHD1-201ENST00000379361 HDGFP51858 240 aaKnown RBP14.33□□□□□ -0.12
PTCHD1-201ENST00000379361 KIAA1211Q6ZU35 1233 aa14.33□□□□□ -0.12
PTCHD1-201ENST00000379361 MSNP26038 577 aaKnown RBP14.31□□□□□ -0.12
PTCHD1-201ENST00000379361 SCRIBQ14160 1630 aa14.31□□□□□ -0.12
PTCHD1-201ENST00000379361 HSCBQ8IWL3 235 aa14.3□□□□□ -0.12
PTCHD1-201ENST00000379361 GPATCH3Q96I76 525 aa14.29□□□□□ -0.12
PTCHD1-201ENST00000379361 TPM4P67936 248 aa14.29□□□□□ -0.12
PTCHD1-201ENST00000379361 RSF1Q96T23 1441 aaPredicted RBP14.29□□□□□ -0.12
PTCHD1-201ENST00000379361 G3V3G9 751 aa14.27□□□□□ -0.12
PTCHD1-201ENST00000379361 DCAF8Q5TAQ9 597 aa14.27□□□□□ -0.12
PTCHD1-201ENST00000379361 GOLGA6L1Q8N7Z2 621 aa14.27□□□□□ -0.13
PTCHD1-201ENST00000379361 HTATSF1O43719 755 aaKnown RBP14.26□□□□□ -0.13
PTCHD1-201ENST00000379361 KCNH8Q96L42 1107 aa14.26□□□□□ -0.13
PTCHD1-201ENST00000379361 KANK1Q14678 1352 aa14.25□□□□□ -0.13
PTCHD1-201ENST00000379361 CEP89Q96ST8 783 aa14.24□□□□□ -0.13
PTCHD1-201ENST00000379361 PLEKHD1A6NEE1 506 aa14.24□□□□□ -0.13
PTCHD1-201ENST00000379361 RTF1Q92541 710 aaKnown RBP14.23□□□□□ -0.13
PTCHD1-201ENST00000379361 CNKSR2Q8WXI2 1034 aa14.22□□□□□ -0.13
PTCHD1-201ENST00000379361 CHMP4AQ9BY43 222 aa14.21□□□□□ -0.13
PTCHD1-201ENST00000379361 PTMSP20962 102 aa14.19□□□□□ -0.14
PTCHD1-201ENST00000379361 RGL3Q3MIN7 710 aa14.19□□□□□ -0.14
PTCHD1-201ENST00000379361 TRHP20396 242 aaPredicted RBP14.18□□□□□ -0.14
PTCHD1-201ENST00000379361 VPS53Q5VIR6 699 aa14.18□□□□□ -0.14
PTCHD1-201ENST00000379361 FRAT1Q92837 279 aaPredicted RBP14.17□□□□□ -0.14
PTCHD1-201ENST00000379361 IRX6P78412 446 aaPredicted RBP14.16□□□□□ -0.14
PTCHD1-201ENST00000379361 RASSF8Q8NHQ8 419 aa14.16□□□□□ -0.14
PTCHD1-201ENST00000379361 TCEAL9Q9UHQ7 104 aa14.16□□□□□ -0.14
PTCHD1-201ENST00000379361 SYAP1Q96A49 352 aaPredicted RBP14.16□□□□□ -0.14
PTCHD1-201ENST00000379361 RRP7BPQ9NSQ0 103 aa14.16□□□□□ -0.14
PTCHD1-201ENST00000379361 PDE4CQ08493 712 aa14.15□□□□□ -0.14
PTCHD1-201ENST00000379361 TNNT3P45378 269 aaPredicted RBP14.15□□□□□ -0.14
PTCHD1-201ENST00000379361 TAF7LQ5H9L4 462 aa14.15□□□□□ -0.15
PTCHD1-201ENST00000379361 U2SURPO15042 1029 aaKnown RBP14.14□□□□□ -0.15
PTCHD1-201ENST00000379361 ERCC6Q03468 1493 aa14.14□□□□□ -0.15
PTCHD1-201ENST00000379361 CALD1Q05682 793 aaKnown RBP14.14□□□□□ -0.15
PTCHD1-201ENST00000379361 NEUROD2Q15784 382 aa14.14□□□□□ -0.15
PTCHD1-201ENST00000379361 CSPP1Q1MSJ5 1256 aa14.12□□□□□ -0.15
PTCHD1-201ENST00000379361 TPM3P06753 285 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms