RNA–Protein interactions for RNA: ENST00000378505.6

RPGR-203, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 4,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-203ENST00000378505 SALL2Q9Y467 1007 aaPredicted RBP15.21■□□□□ 0.03
RPGR-203ENST00000378505 SOGA1O94964 1423 aa15.18■□□□□ 0.02
RPGR-203ENST00000378505 BCL11AQ9H165 835 aa15.17■□□□□ 0.02
RPGR-203ENST00000378505 SLC24A1O60721 1099 aa15.16■□□□□ 0.02
RPGR-203ENST00000378505 PLEKHD1A6NEE1 506 aa15.16■□□□□ 0.02
RPGR-203ENST00000378505 ESF1Q9H501 851 aaKnown RBP15.15■□□□□ 0.02
RPGR-203ENST00000378505 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.14■□□□□ 0.01
RPGR-203ENST00000378505 STAG3Q9UJ98 1225 aa15.14■□□□□ 0.01
RPGR-203ENST00000378505 MROH2BQ7Z745 1585 aa15.14■□□□□ 0.01
RPGR-203ENST00000378505 WDR43Q15061 677 aaKnown RBP eCLIP15.13■□□□□ 0.01
RPGR-203ENST00000378505 CCNB3Q8WWL7 1395 aa15.12■□□□□ 0.01
RPGR-203ENST00000378505 UPF2Q9HAU5 1272 aaKnown RBP15.1■□□□□ 0.01
RPGR-203ENST00000378505 CFDP1Q9UEE9 299 aaPredicted RBP15.1■□□□□ 0.01
RPGR-203ENST00000378505 IRX6P78412 446 aaPredicted RBP15.1■□□□□ 0.01
RPGR-203ENST00000378505 FHAD1B1AJZ9 1412 aa15.09■□□□□ 0.01
RPGR-203ENST00000378505 SIN3AQ96ST3 1273 aa15.09■□□□□ 0.01
RPGR-203ENST00000378505 CCDC88BA6NC98 1476 aa15.08■□□□□ 0
RPGR-203ENST00000378505 VPS8Q8N3P4 1428 aa15.07■□□□□ 0
RPGR-203ENST00000378505 CARMIL1Q5VZK9 1371 aa15.07■□□□□ 0
RPGR-203ENST00000378505 TIMELESSQ9UNS1 1208 aa15.06■□□□□ 0
RPGR-203ENST00000378505 CUX2O14529 1486 aa15.03■□□□□ -0
RPGR-203ENST00000378505 RGL3Q3MIN7 710 aa15.02■□□□□ -0
RPGR-203ENST00000378505 KCNH8Q96L42 1107 aa15.02■□□□□ -0
RPGR-203ENST00000378505 HSP90AA1P07900 732 aaKnown RBP15.01□□□□□ -0.01
RPGR-203ENST00000378505 ABCC8Q09428 1581 aa15□□□□□ -0.01
RPGR-203ENST00000378505 CARD11Q9BXL7 1154 aa14.99□□□□□ -0.01
RPGR-203ENST00000378505 SUPT16HQ9Y5B9 1047 aaKnown RBP14.98□□□□□ -0.01
RPGR-203ENST00000378505 CDCA8Q53HL2 280 aa14.96□□□□□ -0.01
RPGR-203ENST00000378505 KANK4Q5T7N3 995 aaPredicted RBP14.96□□□□□ -0.02
RPGR-203ENST00000378505 NBR1Q14596 966 aa14.94□□□□□ -0.02
RPGR-203ENST00000378505 SETD5Q9C0A6 1442 aa14.94□□□□□ -0.02
RPGR-203ENST00000378505 ANP32BQ92688 251 aaKnown RBP14.92□□□□□ -0.02
RPGR-203ENST00000378505 KNSTRNQ9Y448 316 aa14.92□□□□□ -0.02
RPGR-203ENST00000378505 SMARCA2P51531 1590 aa14.92□□□□□ -0.02
RPGR-203ENST00000378505 TOP2AP11388 1531 aaKnown RBP14.9□□□□□ -0.02
RPGR-203ENST00000378505 CCER2I3L3R5 266 aa14.89□□□□□ -0.03
RPGR-203ENST00000378505 PPP4R2Q9NY27 417 aa14.89□□□□□ -0.03
RPGR-203ENST00000378505 WIZO95785 1651 aa14.87□□□□□ -0.03
RPGR-203ENST00000378505 ARHGAP35Q9NRY4 1499 aa14.87□□□□□ -0.03
RPGR-203ENST00000378505 CFAP53Q96M91 514 aa14.86□□□□□ -0.03
RPGR-203ENST00000378505 SENP3-EIF4A1A0A087X0R7 540 aa14.85□□□□□ -0.03
RPGR-203ENST00000378505 PLPPR3Q6T4P5 718 aa14.85□□□□□ -0.03
RPGR-203ENST00000378505 DDRGK1Q96HY6 314 aa14.84□□□□□ -0.03
RPGR-203ENST00000378505 RAB3GAP2Q9H2M9 1393 aa14.84□□□□□ -0.03
RPGR-203ENST00000378505 MYH16Q9H6N6 1097 aa14.82□□□□□ -0.04
RPGR-203ENST00000378505 EIF4G1Q04637 1599 aaKnown RBP14.81□□□□□ -0.04
RPGR-203ENST00000378505 FMN1Q68DA7 1419 aa14.81□□□□□ -0.04
RPGR-203ENST00000378505 DCAF11Q8TEB1 546 aa14.8□□□□□ -0.04
RPGR-203ENST00000378505 ANP32EQ9BTT0 268 aa14.8□□□□□ -0.04
RPGR-203ENST00000378505 PPP1R15AO75807 674 aaPredicted RBP14.8□□□□□ -0.04
RPGR-203ENST00000378505 HSPA5P11021 654 aaKnown RBP14.8□□□□□ -0.04
RPGR-203ENST00000378505 ERCC6Q03468 1493 aa14.79□□□□□ -0.04
RPGR-203ENST00000378505 BECN1Q14457 450 aa14.79□□□□□ -0.04
RPGR-203ENST00000378505 EIF5BO60841 1220 aaKnown RBP14.78□□□□□ -0.04
RPGR-203ENST00000378505 TDRD9Q8NDG6 1382 aaKnown RBP14.76□□□□□ -0.05
RPGR-203ENST00000378505 TMF1P82094 1093 aa14.76□□□□□ -0.05
RPGR-203ENST00000378505 SENP3Q9H4L4 574 aaPredicted RBP14.76□□□□□ -0.05
RPGR-203ENST00000378505 RAPGEF2Q9Y4G8 1499 aa14.75□□□□□ -0.05
RPGR-203ENST00000378505 PKD2Q13563 968 aa14.75□□□□□ -0.05
RPGR-203ENST00000378505 PDS5BQ9NTI5 1447 aa14.75□□□□□ -0.05
RPGR-203ENST00000378505 CC2D1BQ5T0F9 858 aaKnown RBP14.74□□□□□ -0.05
RPGR-203ENST00000378505 MPHOSPH9Q99550 1183 aa14.74□□□□□ -0.05
RPGR-203ENST00000378505 B4GALNT3Q6L9W6 998 aa14.74□□□□□ -0.05
RPGR-203ENST00000378505 CADPSQ9ULU8 1353 aa14.73□□□□□ -0.05
RPGR-203ENST00000378505 ATAD2BQ9ULI0 1458 aa14.73□□□□□ -0.05
RPGR-203ENST00000378505 NEUROD2Q15784 382 aa14.72□□□□□ -0.05
RPGR-203ENST00000378505 NUDCQ9Y266 331 aa14.72□□□□□ -0.05
RPGR-203ENST00000378505 FOXD1Q16676 465 aa14.71□□□□□ -0.06
RPGR-203ENST00000378505 PPM1GO15355 546 aaPredicted RBP14.7□□□□□ -0.06
RPGR-203ENST00000378505 FTSJ3Q8IY81 847 aaKnown RBP14.7□□□□□ -0.06
RPGR-203ENST00000378505 ARXQ96QS3 562 aa14.7□□□□□ -0.06
RPGR-203ENST00000378505 CARMIL2Q6F5E8 1435 aa14.69□□□□□ -0.06
RPGR-203ENST00000378505 MAPK8IP3Q9UPT6 1336 aa14.69□□□□□ -0.06
RPGR-203ENST00000378505 RUSC2Q8N2Y8 1516 aa14.69□□□□□ -0.06
RPGR-203ENST00000378505 ERICH6BQ5W0A0 696 aa14.69□□□□□ -0.06
RPGR-203ENST00000378505 SMARCA4P51532 1647 aa14.68□□□□□ -0.06
RPGR-203ENST00000378505 POGKQ9P215 609 aa14.67□□□□□ -0.06
RPGR-203ENST00000378505 KANK1Q14678 1352 aa14.67□□□□□ -0.06
RPGR-203ENST00000378505 FHOD3Q2V2M9 1422 aa14.66□□□□□ -0.06
RPGR-203ENST00000378505 RGS3P49796 1198 aa14.66□□□□□ -0.06
RPGR-203ENST00000378505 DHX57Q6P158 1386 aaKnown RBP14.66□□□□□ -0.06
RPGR-203ENST00000378505 TNNT2P45379 298 aaPredicted RBP14.65□□□□□ -0.06
RPGR-203ENST00000378505 FRAT1Q92837 279 aaPredicted RBP14.65□□□□□ -0.06
RPGR-203ENST00000378505 NUP155O75694 1391 aa14.65□□□□□ -0.06
RPGR-203ENST00000378505 ANKRD30AQ9BXX3 1397 aa14.65□□□□□ -0.06
RPGR-203ENST00000378505 L3MBTL2Q969R5 705 aa14.64□□□□□ -0.07
RPGR-203ENST00000378505 NOP58Q9Y2X3 529 aaKnown RBP14.64□□□□□ -0.07
RPGR-203ENST00000378505 MS4A1P11836 297 aa14.64□□□□□ -0.07
RPGR-203ENST00000378505 C14orf37Q86TY3 774 aa14.63□□□□□ -0.07
RPGR-203ENST00000378505 KTN1Q86UP2 1357 aaKnown RBP14.62□□□□□ -0.07
RPGR-203ENST00000378505 GOLGA6L22H0YM25 854 aa14.62□□□□□ -0.07
RPGR-203ENST00000378505 RBM19Q9Y4C8 960 aaKnown RBP14.62□□□□□ -0.07
RPGR-203ENST00000378505 RALBP1Q15311 655 aa14.61□□□□□ -0.07
RPGR-203ENST00000378505 CHMP4BQ9H444 224 aaKnown RBP14.61□□□□□ -0.07
RPGR-203ENST00000378505 U2SURPO15042 1029 aaKnown RBP14.6□□□□□ -0.07
RPGR-203ENST00000378505 EFCAB2Q5VUJ9 269 aa14.59□□□□□ -0.07
RPGR-203ENST00000378505 PNNQ9H307 717 aaKnown RBP14.59□□□□□ -0.07
RPGR-203ENST00000378505 LAS1LQ9Y4W2 734 aaKnown RBP14.59□□□□□ -0.07
RPGR-203ENST00000378505 ARID4BQ4LE39 1312 aaPredicted RBP14.59□□□□□ -0.07
RPGR-203ENST00000378505 ZBTB7CA1YPR0 619 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms