RNA–Protein interactions for RNA: ENST00000378402.9

PKHD1L1-201, Transcript of PKHD1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKHD1L1, Length 13,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1L1-201ENST00000378402 FAM193AP78312 1265 aa4.5□□□□□ -1.69
PKHD1L1-201ENST00000378402 BRD2P25440 801 aaKnown RBP4.49□□□□□ -1.69
PKHD1L1-201ENST00000378402 ZNF526Q8TF50 670 aaPredicted RBP4.49□□□□□ -1.69
PKHD1L1-201ENST00000378402 NAP1L5Q96NT1 182 aaPredicted RBP4.49□□□□□ -1.69
PKHD1L1-201ENST00000378402 GOLGA6L6A8MZA4 724 aa4.48□□□□□ -1.69
PKHD1L1-201ENST00000378402 CCDC66A2RUB6 948 aa4.48□□□□□ -1.69
PKHD1L1-201ENST00000378402 SETQ01105 290 aaPredicted RBP4.48□□□□□ -1.69
PKHD1L1-201ENST00000378402 TPM2P07951 284 aa4.48□□□□□ -1.69
PKHD1L1-201ENST00000378402 ATP1B4Q9UN42 357 aaPredicted RBP4.48□□□□□ -1.69
PKHD1L1-201ENST00000378402 GOLGA6L1Q8N7Z2 621 aa4.48□□□□□ -1.69
PKHD1L1-201ENST00000378402 CCER2I3L3R5 266 aa4.48□□□□□ -1.69
PKHD1L1-201ENST00000378402 CREBRFQ8IUR6 639 aa4.48□□□□□ -1.69
PKHD1L1-201ENST00000378402 CLSTN1O94985 981 aa4.47□□□□□ -1.69
PKHD1L1-201ENST00000378402 ANP32CO43423 234 aa4.47□□□□□ -1.69
PKHD1L1-201ENST00000378402 FAM43AQ8N2R8 423 aa4.47□□□□□ -1.69
PKHD1L1-201ENST00000378402 CCDC136Q96JN2 1154 aa4.47□□□□□ -1.69
PKHD1L1-201ENST00000378402 C11orf95C9JLR9 678 aaPredicted RBP4.46□□□□□ -1.7
PKHD1L1-201ENST00000378402 CHAF1AQ13111 956 aaPredicted RBP4.46□□□□□ -1.7
PKHD1L1-201ENST00000378402 TCERG1O14776 1098 aaKnown RBP4.46□□□□□ -1.7
PKHD1L1-201ENST00000378402 CHIC1Q5VXU3 224 aa4.46□□□□□ -1.7
PKHD1L1-201ENST00000378402 CTR9Q6PD62 1173 aa4.46□□□□□ -1.7
PKHD1L1-201ENST00000378402 SSR1P43307 286 aaKnown RBP4.46□□□□□ -1.7
PKHD1L1-201ENST00000378402 CSPP1Q1MSJ5 1256 aa4.46□□□□□ -1.7
PKHD1L1-201ENST00000378402 DHX8Q14562 1220 aaKnown RBP4.45□□□□□ -1.7
PKHD1L1-201ENST00000378402 KLHL34Q8N239 644 aa4.45□□□□□ -1.7
PKHD1L1-201ENST00000378402 CLGNO14967 610 aa4.45□□□□□ -1.7
PKHD1L1-201ENST00000378402 PDCL3Q9H2J4 239 aa4.44□□□□□ -1.7
PKHD1L1-201ENST00000378402 TRIM41Q8WV44 630 aa4.44□□□□□ -1.7
PKHD1L1-201ENST00000378402 TERF1P54274 439 aa4.44□□□□□ -1.7
PKHD1L1-201ENST00000378402 AAMPQ13685 434 aa4.44□□□□□ -1.7
PKHD1L1-201ENST00000378402 HIRIP3Q9BW71 556 aaPredicted RBP4.44□□□□□ -1.7
PKHD1L1-201ENST00000378402 DNAJC5BQ9UF47 199 aa4.44□□□□□ -1.7
PKHD1L1-201ENST00000378402 NPM2Q86SE8 214 aaKnown RBP4.44□□□□□ -1.7
PKHD1L1-201ENST00000378402 VGFO15240 615 aaPredicted RBP4.44□□□□□ -1.7
PKHD1L1-201ENST00000378402 PDCL2Q8N4E4 241 aa4.44□□□□□ -1.7
PKHD1L1-201ENST00000378402 CAVIN1Q6NZI2 390 aaKnown RBP4.44□□□□□ -1.7
PKHD1L1-201ENST00000378402 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.44□□□□□ -1.7
PKHD1L1-201ENST00000378402 CANXP27824 592 aaKnown RBP4.43□□□□□ -1.7
PKHD1L1-201ENST00000378402 CENPJQ9HC77 1338 aaPredicted RBP4.43□□□□□ -1.7
PKHD1L1-201ENST00000378402 CCDC144AA2RUR9 1427 aa4.43□□□□□ -1.7
PKHD1L1-201ENST00000378402 DEKP35659 375 aaKnown RBP4.43□□□□□ -1.7
PKHD1L1-201ENST00000378402 NOM1Q5C9Z4 860 aaKnown RBP4.43□□□□□ -1.7
PKHD1L1-201ENST00000378402 PES1O00541 588 aaKnown RBP4.43□□□□□ -1.7
PKHD1L1-201ENST00000378402 RBM28Q9NW13 759 aaKnown RBP4.43□□□□□ -1.7
PKHD1L1-201ENST00000378402 KIF20AO95235 890 aa4.43□□□□□ -1.7
PKHD1L1-201ENST00000378402 ABCC9O60706 1549 aa4.43□□□□□ -1.7
PKHD1L1-201ENST00000378402 PPP4R2Q9NY27 417 aa4.43□□□□□ -1.7
PKHD1L1-201ENST00000378402 HMGN5P82970 282 aaKnown RBP4.42□□□□□ -1.7
PKHD1L1-201ENST00000378402 PDE4CQ08493 712 aa4.42□□□□□ -1.7
PKHD1L1-201ENST00000378402 SKOR2Q2VWA4 1001 aaPredicted RBP4.42□□□□□ -1.7
PKHD1L1-201ENST00000378402 MSNP26038 577 aaKnown RBP4.41□□□□□ -1.7
PKHD1L1-201ENST00000378402 GSE1Q14687 1217 aa4.41□□□□□ -1.7
PKHD1L1-201ENST00000378402 PDIA4P13667 645 aaKnown RBP4.41□□□□□ -1.7
PKHD1L1-201ENST00000378402 NRDCO43847 1150 aa4.41□□□□□ -1.7
PKHD1L1-201ENST00000378402 HAP1P54257 671 aaPredicted RBP4.41□□□□□ -1.7
PKHD1L1-201ENST00000378402 IPO9Q96P70 1041 aaKnown RBP4.41□□□□□ -1.7
PKHD1L1-201ENST00000378402 RBM19Q9Y4C8 960 aaKnown RBP4.41□□□□□ -1.7
PKHD1L1-201ENST00000378402 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.4□□□□□ -1.7
PKHD1L1-201ENST00000378402 SUPT16HQ9Y5B9 1047 aaKnown RBP4.4□□□□□ -1.7
PKHD1L1-201ENST00000378402 MS4A1P11836 297 aa4.4□□□□□ -1.7
PKHD1L1-201ENST00000378402 USP8P40818 1118 aa4.4□□□□□ -1.7
PKHD1L1-201ENST00000378402 WRNQ14191 1432 aaPredicted RBP eCLIP4.4□□□□□ -1.7
PKHD1L1-201ENST00000378402 CHMP4BQ9H444 224 aaKnown RBP4.4□□□□□ -1.71
PKHD1L1-201ENST00000378402 GOLGA3Q08378 1498 aa4.4□□□□□ -1.71
PKHD1L1-201ENST00000378402 TACO1Q9BSH4 297 aaKnown RBP4.4□□□□□ -1.71
PKHD1L1-201ENST00000378402 APPP05067 770 aa4.4□□□□□ -1.71
PKHD1L1-201ENST00000378402 MNS1Q8NEH6 495 aa4.4□□□□□ -1.71
PKHD1L1-201ENST00000378402 ZNF622Q969S3 477 aaKnown RBP eCLIP4.39□□□□□ -1.71
PKHD1L1-201ENST00000378402 CEP120Q8N960 986 aa4.39□□□□□ -1.71
PKHD1L1-201ENST00000378402 PHLDB1Q86UU1 1377 aa4.39□□□□□ -1.71
PKHD1L1-201ENST00000378402 NINLQ9Y2I6 1382 aa4.39□□□□□ -1.71
PKHD1L1-201ENST00000378402 CWC15Q9P013 229 aaKnown RBP4.39□□□□□ -1.71
PKHD1L1-201ENST00000378402 ZBTB7CA1YPR0 619 aa4.39□□□□□ -1.71
PKHD1L1-201ENST00000378402 MCCP23508 829 aa4.39□□□□□ -1.71
PKHD1L1-201ENST00000378402 HTATSF1O43719 755 aaKnown RBP4.38□□□□□ -1.71
PKHD1L1-201ENST00000378402 DNAJC2Q99543 621 aaKnown RBP4.38□□□□□ -1.71
PKHD1L1-201ENST00000378402 CALD1Q05682 793 aaKnown RBP4.38□□□□□ -1.71
PKHD1L1-201ENST00000378402 NGEFQ8N5V2 710 aa4.38□□□□□ -1.71
PKHD1L1-201ENST00000378402 KTN1Q86UP2 1357 aaKnown RBP4.38□□□□□ -1.71
PKHD1L1-201ENST00000378402 GPS2Q13227 327 aa4.38□□□□□ -1.71
PKHD1L1-201ENST00000378402 LETM1O95202 739 aaPredicted RBP4.38□□□□□ -1.71
PKHD1L1-201ENST00000378402 NEFHP12036 1026 aa4.38□□□□□ -1.71
PKHD1L1-201ENST00000378402 PSMD1Q99460 953 aa4.38□□□□□ -1.71
PKHD1L1-201ENST00000378402 TNNT3P45378 269 aaPredicted RBP4.38□□□□□ -1.71
PKHD1L1-201ENST00000378402 CC2D1BQ5T0F9 858 aaKnown RBP4.38□□□□□ -1.71
PKHD1L1-201ENST00000378402 MCM5P33992 734 aa4.37□□□□□ -1.71
PKHD1L1-201ENST00000378402 C14orf37Q86TY3 774 aa4.37□□□□□ -1.71
PKHD1L1-201ENST00000378402 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.37□□□□□ -1.71
PKHD1L1-201ENST00000378402 CCDC9Q9Y3X0 531 aaKnown RBP4.37□□□□□ -1.71
PKHD1L1-201ENST00000378402 TPM3P06753 285 aa4.37□□□□□ -1.71
PKHD1L1-201ENST00000378402 SH3BGRP55822 239 aaPredicted RBP4.37□□□□□ -1.71
PKHD1L1-201ENST00000378402 NPM1P06748 294 aaKnown RBP eCLIP4.37□□□□□ -1.71
PKHD1L1-201ENST00000378402 CSRNP3Q8WYN3 585 aa4.37□□□□□ -1.71
PKHD1L1-201ENST00000378402 FAM107BQ9H098 131 aa4.36□□□□□ -1.71
PKHD1L1-201ENST00000378402 HS1BP3Q53T59 392 aa4.36□□□□□ -1.71
PKHD1L1-201ENST00000378402 SYAP1Q96A49 352 aaPredicted RBP4.36□□□□□ -1.71
PKHD1L1-201ENST00000378402 DDX11L8A8MPP1 907 aa4.36□□□□□ -1.71
PKHD1L1-201ENST00000378402 MYO15BQ96JP2 1530 aa4.35□□□□□ -1.71
PKHD1L1-201ENST00000378402 CASC1Q6TDU7 716 aa4.35□□□□□ -1.71
PKHD1L1-201ENST00000378402 KNSTRNQ9Y448 316 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms