RNA–Protein interactions for RNA: ENST00000377636.7

TBC1D4-202, Transcript of TBC1 domain family member 4, humanhuman

APPRIS P3 TSL 2 BASIC

Gene TBC1D4, Length 6,364 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4-202ENST00000377636 C14orf37Q86TY3 774 aa22.77■■□□□ 1.24
TBC1D4-202ENST00000377636 DCAF1Q9Y4B6 1507 aa22.74■■□□□ 1.23
TBC1D4-202ENST00000377636 MIER1Q8N108 512 aa22.74■■□□□ 1.23
TBC1D4-202ENST00000377636 EIF4G2P78344 907 aaKnown RBP eCLIP22.73■■□□□ 1.23
TBC1D4-202ENST00000377636 RRP7BPQ9NSQ0 103 aa22.71■■□□□ 1.23
TBC1D4-202ENST00000377636 CHMP7Q8WUX9 453 aaPredicted RBP22.71■■□□□ 1.23
TBC1D4-202ENST00000377636 PPP1R15AO75807 674 aaPredicted RBP22.7■■□□□ 1.22
TBC1D4-202ENST00000377636 BECN1Q14457 450 aa22.66■■□□□ 1.22
TBC1D4-202ENST00000377636 NCLP19338 710 aaKnown RBP22.66■■□□□ 1.22
TBC1D4-202ENST00000377636 KCNH8Q96L42 1107 aa22.63■■□□□ 1.21
TBC1D4-202ENST00000377636 SENP3-EIF4A1A0A087X0R7 540 aa22.62■■□□□ 1.21
TBC1D4-202ENST00000377636 RGL3Q3MIN7 710 aa22.62■■□□□ 1.21
TBC1D4-202ENST00000377636 DDRGK1Q96HY6 314 aa22.62■■□□□ 1.21
TBC1D4-202ENST00000377636 TRIM44Q96DX7 344 aaPredicted RBP22.59■■□□□ 1.21
TBC1D4-202ENST00000377636 CLIP1P30622 1438 aa22.58■■□□□ 1.2
TBC1D4-202ENST00000377636 GOLGA6L22H0YM25 854 aa22.57■■□□□ 1.2
TBC1D4-202ENST00000377636 CFAP53Q96M91 514 aa22.55■■□□□ 1.2
TBC1D4-202ENST00000377636 PPM1GO15355 546 aaPredicted RBP22.54■■□□□ 1.2
TBC1D4-202ENST00000377636 HAP1P54257 671 aaPredicted RBP22.52■■□□□ 1.2
TBC1D4-202ENST00000377636 PLEKHD1A6NEE1 506 aa22.5■■□□□ 1.19
TBC1D4-202ENST00000377636 TPRNQ4KMQ1 711 aa22.5■■□□□ 1.19
TBC1D4-202ENST00000377636 KNSTRNQ9Y448 316 aa22.5■■□□□ 1.19
TBC1D4-202ENST00000377636 ANP32EQ9BTT0 268 aa22.49■■□□□ 1.19
TBC1D4-202ENST00000377636 ZRSR1Q15695 479 aaKnown RBP22.48■■□□□ 1.19
TBC1D4-202ENST00000377636 FTSJ3Q8IY81 847 aaKnown RBP22.48■■□□□ 1.19
TBC1D4-202ENST00000377636 CASC1Q6TDU7 716 aa22.46■■□□□ 1.19
TBC1D4-202ENST00000377636 PTMAP06454 111 aaKnown RBP22.46■■□□□ 1.19
TBC1D4-202ENST00000377636 NEUROD2Q15784 382 aa22.45■■□□□ 1.18
TBC1D4-202ENST00000377636 CDCA8Q53HL2 280 aa22.45■■□□□ 1.18
TBC1D4-202ENST00000377636 RSF1Q96T23 1441 aaPredicted RBP22.45■■□□□ 1.18
TBC1D4-202ENST00000377636 LAS1LQ9Y4W2 734 aaKnown RBP22.44■■□□□ 1.18
TBC1D4-202ENST00000377636 ARID4BQ4LE39 1312 aaPredicted RBP22.44■■□□□ 1.18
TBC1D4-202ENST00000377636 CARD11Q9BXL7 1154 aa22.41■■□□□ 1.18
TBC1D4-202ENST00000377636 SUPT16HQ9Y5B9 1047 aaKnown RBP22.41■■□□□ 1.18
TBC1D4-202ENST00000377636 ZCCHC6Q5VYS8 1495 aaKnown RBP22.41■■□□□ 1.18
TBC1D4-202ENST00000377636 TULP1O00294 542 aaPredicted RBP22.4■■□□□ 1.18
TBC1D4-202ENST00000377636 MAPK8IP3Q9UPT6 1336 aa22.39■■□□□ 1.17
TBC1D4-202ENST00000377636 CFDP1Q9UEE9 299 aaPredicted RBP22.37■■□□□ 1.17
TBC1D4-202ENST00000377636 DNTTIP2Q5QJE6 756 aaKnown RBP22.36■■□□□ 1.17
TBC1D4-202ENST00000377636 LMOD2Q6P5Q4 547 aa22.34■■□□□ 1.17
TBC1D4-202ENST00000377636 TAOK2Q9UL54 1235 aa22.33■■□□□ 1.17
TBC1D4-202ENST00000377636 RGS3P49796 1198 aa22.32■■□□□ 1.16
TBC1D4-202ENST00000377636 FRAT1Q92837 279 aaPredicted RBP22.32■■□□□ 1.16
TBC1D4-202ENST00000377636 NUDCQ9Y266 331 aa22.32■■□□□ 1.16
TBC1D4-202ENST00000377636 TNNT2P45379 298 aaPredicted RBP22.31■■□□□ 1.16
TBC1D4-202ENST00000377636 POGKQ9P215 609 aa22.3■■□□□ 1.16
TBC1D4-202ENST00000377636 GOLGA3Q08378 1498 aa22.3■■□□□ 1.16
TBC1D4-202ENST00000377636 CEP162Q5TB80 1403 aa22.29■■□□□ 1.16
TBC1D4-202ENST00000377636 PLCB2Q00722 1185 aa22.27■■□□□ 1.15
TBC1D4-202ENST00000377636 NPHP1O15259 732 aa22.25■■□□□ 1.15
TBC1D4-202ENST00000377636 OS9Q13438 667 aaPredicted RBP22.24■■□□□ 1.15
TBC1D4-202ENST00000377636 CC2D1BQ5T0F9 858 aaKnown RBP22.24■■□□□ 1.15
TBC1D4-202ENST00000377636 U2SURPO15042 1029 aaKnown RBP22.23■■□□□ 1.15
TBC1D4-202ENST00000377636 FGD1P98174 961 aa22.22■■□□□ 1.15
TBC1D4-202ENST00000377636 PPP4R2Q9NY27 417 aa22.2■■□□□ 1.15
TBC1D4-202ENST00000377636 HSP90AB1P08238 724 aaKnown RBP22.2■■□□□ 1.14
TBC1D4-202ENST00000377636 SIN3AQ96ST3 1273 aa22.2■■□□□ 1.14
TBC1D4-202ENST00000377636 ERICH6BQ5W0A0 696 aa22.19■■□□□ 1.14
TBC1D4-202ENST00000377636 EEA1Q15075 1411 aa22.18■■□□□ 1.14
TBC1D4-202ENST00000377636 KCNJ4P48050 445 aa22.18■■□□□ 1.14
TBC1D4-202ENST00000377636 NAP1L2Q9ULW6 460 aaPredicted RBP22.18■■□□□ 1.14
TBC1D4-202ENST00000377636 NAP1L5Q96NT1 182 aaPredicted RBP22.17■■□□□ 1.14
TBC1D4-202ENST00000377636 CHMP4BQ9H444 224 aaKnown RBP22.17■■□□□ 1.14
TBC1D4-202ENST00000377636 MS4A1P11836 297 aa22.13■■□□□ 1.13
TBC1D4-202ENST00000377636 RTN4Q9NQC3 1192 aaKnown RBP22.13■■□□□ 1.13
TBC1D4-202ENST00000377636 NOP58Q9Y2X3 529 aaKnown RBP22.11■■□□□ 1.13
TBC1D4-202ENST00000377636 GOLGA6L6A8MZA4 724 aa22.11■■□□□ 1.13
TBC1D4-202ENST00000377636 GOLGA2Q08379 1002 aa22.1■■□□□ 1.13
TBC1D4-202ENST00000377636 B4GALNT3Q6L9W6 998 aa22.1■■□□□ 1.13
TBC1D4-202ENST00000377636 WRNQ14191 1432 aaPredicted RBP eCLIP22.09■■□□□ 1.13
TBC1D4-202ENST00000377636 PNNQ9H307 717 aaKnown RBP22.09■■□□□ 1.13
TBC1D4-202ENST00000377636 KIF27Q86VH2 1401 aa22.09■■□□□ 1.13
TBC1D4-202ENST00000377636 SOX12O15370 315 aa22.08■■□□□ 1.13
TBC1D4-202ENST00000377636 CCDC180Q9P1Z9 1646 aa22.07■■□□□ 1.12
TBC1D4-202ENST00000377636 TMF1P82094 1093 aa22.06■■□□□ 1.12
TBC1D4-202ENST00000377636 DCAF11Q8TEB1 546 aa22.05■■□□□ 1.12
TBC1D4-202ENST00000377636 GOLGA6L4A6NEF3 574 aa22.05■■□□□ 1.12
TBC1D4-202ENST00000377636 MYO15BQ96JP2 1530 aa22.05■■□□□ 1.12
TBC1D4-202ENST00000377636 HSCBQ8IWL3 235 aa22.03■■□□□ 1.12
TBC1D4-202ENST00000377636 NRDCO43847 1150 aa22.03■■□□□ 1.12
TBC1D4-202ENST00000377636 SRPK2P78362 688 aaKnown RBP22.01■■□□□ 1.11
TBC1D4-202ENST00000377636 CEP164Q9UPV0 1460 aa22.01■■□□□ 1.11
TBC1D4-202ENST00000377636 CCNB3Q8WWL7 1395 aa22■■□□□ 1.11
TBC1D4-202ENST00000377636 TNIKQ9UKE5 1360 aa22■■□□□ 1.11
TBC1D4-202ENST00000377636 SAFB2Q14151 953 aaKnown RBP eCLIP21.98■■□□□ 1.11
TBC1D4-202ENST00000377636 SPRYD3Q8NCJ5 442 aa21.98■■□□□ 1.11
TBC1D4-202ENST00000377636 MLECQ14165 292 aa21.97■■□□□ 1.11
TBC1D4-202ENST00000377636 MORC1Q86VD1 984 aa21.97■■□□□ 1.11
TBC1D4-202ENST00000377636 BAZ1BQ9UIG0 1483 aaKnown RBP21.96■■□□□ 1.11
TBC1D4-202ENST00000377636 MCCP23508 829 aa21.96■■□□□ 1.11
TBC1D4-202ENST00000377636 RB1CC1Q8TDY2 1594 aa21.96■■□□□ 1.11
TBC1D4-202ENST00000377636 KANK1Q14678 1352 aa21.95■■□□□ 1.1
TBC1D4-202ENST00000377636 CLSTN1O94985 981 aa21.92■■□□□ 1.1
TBC1D4-202ENST00000377636 CHAF1AQ13111 956 aaPredicted RBP21.91■■□□□ 1.1
TBC1D4-202ENST00000377636 RTF1Q92541 710 aaKnown RBP21.91■■□□□ 1.1
TBC1D4-202ENST00000377636 ISY1Q9ULR0 285 aaKnown RBP21.91■■□□□ 1.1
TBC1D4-202ENST00000377636 APBB1O00213 710 aa21.9■■□□□ 1.1
TBC1D4-202ENST00000377636 HDGFP51858 240 aaKnown RBP21.9■■□□□ 1.1
TBC1D4-202ENST00000377636 ERCC6Q03468 1493 aa21.89■■□□□ 1.1
TBC1D4-202ENST00000377636 DRC7Q8IY82 874 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms