RNA–Protein interactions for RNA: ENST00000377561.6

CNTNAP3B-203, Transcript of contactin associated protein like 3B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 5,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-203ENST00000377561 NPM1P06748 294 aaKnown RBP eCLIP25.23■■□□□ 1.63
CNTNAP3B-203ENST00000377561 KDM2AQ9Y2K7 1162 aa25.22■■□□□ 1.63
CNTNAP3B-203ENST00000377561 CCDC88BA6NC98 1476 aa25.19■■□□□ 1.62
CNTNAP3B-203ENST00000377561 NPM2Q86SE8 214 aaKnown RBP25.19■■□□□ 1.62
CNTNAP3B-203ENST00000377561 ESF1Q9H501 851 aaKnown RBP25.19■■□□□ 1.62
CNTNAP3B-203ENST00000377561 SALL2Q9Y467 1007 aaPredicted RBP25.15■■□□□ 1.62
CNTNAP3B-203ENST00000377561 PLEKHD1A6NEE1 506 aa25.13■■□□□ 1.61
CNTNAP3B-203ENST00000377561 CCDC136Q96JN2 1154 aa25.13■■□□□ 1.61
CNTNAP3B-203ENST00000377561 STAG3Q9UJ98 1225 aa25.11■■□□□ 1.61
CNTNAP3B-203ENST00000377561 FHAD1B1AJZ9 1412 aa25.1■■□□□ 1.61
CNTNAP3B-203ENST00000377561 CCNB3Q8WWL7 1395 aa25.09■■□□□ 1.61
CNTNAP3B-203ENST00000377561 ABCC8Q09428 1581 aa25.09■■□□□ 1.61
CNTNAP3B-203ENST00000377561 WDR43Q15061 677 aaKnown RBP eCLIP25.07■■□□□ 1.6
CNTNAP3B-203ENST00000377561 VPS8Q8N3P4 1428 aa25.06■■□□□ 1.6
CNTNAP3B-203ENST00000377561 CARMIL1Q5VZK9 1371 aa25.06■■□□□ 1.6
CNTNAP3B-203ENST00000377561 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.04■■□□□ 1.6
CNTNAP3B-203ENST00000377561 CUX2O14529 1486 aa25.04■■□□□ 1.6
CNTNAP3B-203ENST00000377561 CFDP1Q9UEE9 299 aaPredicted RBP25.04■■□□□ 1.6
CNTNAP3B-203ENST00000377561 SIN3AQ96ST3 1273 aa25■■□□□ 1.59
CNTNAP3B-203ENST00000377561 SMARCA2P51531 1590 aa24.98■■□□□ 1.59
CNTNAP3B-203ENST00000377561 TOP2AP11388 1531 aaKnown RBP24.98■■□□□ 1.59
CNTNAP3B-203ENST00000377561 IRX6P78412 446 aaPredicted RBP24.98■■□□□ 1.59
CNTNAP3B-203ENST00000377561 HSP90AA1P07900 732 aaKnown RBP24.96■■□□□ 1.59
CNTNAP3B-203ENST00000377561 WIZO95785 1651 aa24.96■■□□□ 1.59
CNTNAP3B-203ENST00000377561 UPF2Q9HAU5 1272 aaKnown RBP24.94■■□□□ 1.58
CNTNAP3B-203ENST00000377561 ANP32BQ92688 251 aaKnown RBP24.94■■□□□ 1.58
CNTNAP3B-203ENST00000377561 KCNH8Q96L42 1107 aa24.93■■□□□ 1.58
CNTNAP3B-203ENST00000377561 TIMELESSQ9UNS1 1208 aa24.9■■□□□ 1.58
CNTNAP3B-203ENST00000377561 PLPPR3Q6T4P5 718 aa24.89■■□□□ 1.57
CNTNAP3B-203ENST00000377561 RGL3Q3MIN7 710 aa24.87■■□□□ 1.57
CNTNAP3B-203ENST00000377561 EIF5BO60841 1220 aaKnown RBP24.86■■□□□ 1.57
CNTNAP3B-203ENST00000377561 CARD11Q9BXL7 1154 aa24.84■■□□□ 1.57
CNTNAP3B-203ENST00000377561 SETD5Q9C0A6 1442 aa24.83■■□□□ 1.57
CNTNAP3B-203ENST00000377561 KANK4Q5T7N3 995 aaPredicted RBP24.82■■□□□ 1.56
CNTNAP3B-203ENST00000377561 ARHGAP35Q9NRY4 1499 aa24.78■■□□□ 1.56
CNTNAP3B-203ENST00000377561 EIF4G1Q04637 1599 aaKnown RBP24.78■■□□□ 1.56
CNTNAP3B-203ENST00000377561 CDCA8Q53HL2 280 aa24.77■■□□□ 1.56
CNTNAP3B-203ENST00000377561 NBR1Q14596 966 aa24.76■■□□□ 1.55
CNTNAP3B-203ENST00000377561 SUPT16HQ9Y5B9 1047 aaKnown RBP24.76■■□□□ 1.55
CNTNAP3B-203ENST00000377561 ERCC6Q03468 1493 aa24.74■■□□□ 1.55
CNTNAP3B-203ENST00000377561 KNSTRNQ9Y448 316 aa24.71■■□□□ 1.55
CNTNAP3B-203ENST00000377561 ANP32EQ9BTT0 268 aa24.7■■□□□ 1.55
CNTNAP3B-203ENST00000377561 SMARCA4P51532 1647 aa24.65■■□□□ 1.54
CNTNAP3B-203ENST00000377561 CCER2I3L3R5 266 aa24.65■■□□□ 1.54
CNTNAP3B-203ENST00000377561 FMN1Q68DA7 1419 aa24.64■■□□□ 1.54
CNTNAP3B-203ENST00000377561 RAB3GAP2Q9H2M9 1393 aa24.64■■□□□ 1.54
CNTNAP3B-203ENST00000377561 PPP4R2Q9NY27 417 aa24.6■■□□□ 1.53
CNTNAP3B-203ENST00000377561 ATAD2BQ9ULI0 1458 aa24.6■■□□□ 1.53
CNTNAP3B-203ENST00000377561 CFAP53Q96M91 514 aa24.6■■□□□ 1.53
CNTNAP3B-203ENST00000377561 PDS5BQ9NTI5 1447 aa24.59■■□□□ 1.53
CNTNAP3B-203ENST00000377561 RAPGEF2Q9Y4G8 1499 aa24.58■■□□□ 1.53
CNTNAP3B-203ENST00000377561 SENP3-EIF4A1A0A087X0R7 540 aa24.58■■□□□ 1.53
CNTNAP3B-203ENST00000377561 PPP1R15AO75807 674 aaPredicted RBP24.55■■□□□ 1.52
CNTNAP3B-203ENST00000377561 DDRGK1Q96HY6 314 aa24.55■■□□□ 1.52
CNTNAP3B-203ENST00000377561 CADPSQ9ULU8 1353 aa24.54■■□□□ 1.52
CNTNAP3B-203ENST00000377561 TDRD9Q8NDG6 1382 aaKnown RBP24.54■■□□□ 1.52
CNTNAP3B-203ENST00000377561 HSPA5P11021 654 aaKnown RBP24.54■■□□□ 1.52
CNTNAP3B-203ENST00000377561 DCAF11Q8TEB1 546 aa24.54■■□□□ 1.52
CNTNAP3B-203ENST00000377561 MYH16Q9H6N6 1097 aa24.53■■□□□ 1.52
CNTNAP3B-203ENST00000377561 SENP3Q9H4L4 574 aaPredicted RBP24.5■■□□□ 1.51
CNTNAP3B-203ENST00000377561 RUSC2Q8N2Y8 1516 aa24.48■■□□□ 1.51
CNTNAP3B-203ENST00000377561 TMF1P82094 1093 aa24.47■■□□□ 1.51
CNTNAP3B-203ENST00000377561 CARMIL2Q6F5E8 1435 aa24.46■■□□□ 1.51
CNTNAP3B-203ENST00000377561 CC2D1BQ5T0F9 858 aaKnown RBP24.45■■□□□ 1.5
CNTNAP3B-203ENST00000377561 PKD2Q13563 968 aa24.44■■□□□ 1.5
CNTNAP3B-203ENST00000377561 MPHOSPH9Q99550 1183 aa24.44■■□□□ 1.5
CNTNAP3B-203ENST00000377561 BECN1Q14457 450 aa24.44■■□□□ 1.5
CNTNAP3B-203ENST00000377561 A0A0G2JS52 829 aa24.43■■□□□ 1.5
CNTNAP3B-203ENST00000377561 FHOD3Q2V2M9 1422 aa24.43■■□□□ 1.5
CNTNAP3B-203ENST00000377561 GLIPR1L2Q4G1C9 344 aa24.41■■□□□ 1.5
CNTNAP3B-203ENST00000377561 FOXD1Q16676 465 aa24.41■■□□□ 1.5
CNTNAP3B-203ENST00000377561 ARXQ96QS3 562 aa24.4■■□□□ 1.5
CNTNAP3B-203ENST00000377561 KANK1Q14678 1352 aa24.39■■□□□ 1.5
CNTNAP3B-203ENST00000377561 NUDCQ9Y266 331 aa24.37■■□□□ 1.49
CNTNAP3B-203ENST00000377561 ZBTB7CA1YPR0 619 aa24.36■■□□□ 1.49
CNTNAP3B-203ENST00000377561 NEUROD2Q15784 382 aa24.36■■□□□ 1.49
CNTNAP3B-203ENST00000377561 B4GALNT3Q6L9W6 998 aa24.34■■□□□ 1.49
CNTNAP3B-203ENST00000377561 MAPK8IP3Q9UPT6 1336 aa24.34■■□□□ 1.49
CNTNAP3B-203ENST00000377561 C14orf37Q86TY3 774 aa24.34■■□□□ 1.49
CNTNAP3B-203ENST00000377561 FTSJ3Q8IY81 847 aaKnown RBP24.34■■□□□ 1.49
CNTNAP3B-203ENST00000377561 DHX57Q6P158 1386 aaKnown RBP24.33■■□□□ 1.49
CNTNAP3B-203ENST00000377561 ANKRD30AQ9BXX3 1397 aa24.33■■□□□ 1.49
CNTNAP3B-203ENST00000377561 POGKQ9P215 609 aa24.32■■□□□ 1.48
CNTNAP3B-203ENST00000377561 PPM1GO15355 546 aaPredicted RBP24.31■■□□□ 1.48
CNTNAP3B-203ENST00000377561 CDK11BP21127 795 aaKnown RBP24.31■■□□□ 1.48
CNTNAP3B-203ENST00000377561 NUP155O75694 1391 aa24.3■■□□□ 1.48
CNTNAP3B-203ENST00000377561 PLEKHG5O94827 1062 aa24.3■■□□□ 1.48
CNTNAP3B-203ENST00000377561 TNNT2P45379 298 aaPredicted RBP24.27■■□□□ 1.48
CNTNAP3B-203ENST00000377561 KTN1Q86UP2 1357 aaKnown RBP24.26■■□□□ 1.47
CNTNAP3B-203ENST00000377561 CCDC18Q5T9S5 1454 aa24.25■■□□□ 1.47
CNTNAP3B-203ENST00000377561 ERICH6BQ5W0A0 696 aa24.25■■□□□ 1.47
CNTNAP3B-203ENST00000377561 L3MBTL2Q969R5 705 aa24.24■■□□□ 1.47
CNTNAP3B-203ENST00000377561 FRAT1Q92837 279 aaPredicted RBP24.24■■□□□ 1.47
CNTNAP3B-203ENST00000377561 ARID4BQ4LE39 1312 aaPredicted RBP24.23■■□□□ 1.47
CNTNAP3B-203ENST00000377561 ROCK2O75116 1388 aaKnown RBP24.22■■□□□ 1.47
CNTNAP3B-203ENST00000377561 RGS3P49796 1198 aa24.22■■□□□ 1.47
CNTNAP3B-203ENST00000377561 FANCD2Q9BXW9 1451 aa24.21■■□□□ 1.47
CNTNAP3B-203ENST00000377561 NOP58Q9Y2X3 529 aaKnown RBP24.21■■□□□ 1.47
CNTNAP3B-203ENST00000377561 MS4A1P11836 297 aa24.21■■□□□ 1.47
CNTNAP3B-203ENST00000377561 RALBP1Q15311 655 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms