RNA–Protein interactions for RNA: ENST00000377142.4

NKX2-2-201, Transcript of NK2 homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-2, Length 2,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2-201ENST00000377142 THOC2Q8NI27 1593 aaKnown RBP26.75■■□□□ 1.87
NKX2-2-201ENST00000377142 FHAD1B1AJZ9 1412 aa26.73■■□□□ 1.87
NKX2-2-201ENST00000377142 MAP3K1Q13233 1512 aa26.71■■□□□ 1.87
NKX2-2-201ENST00000377142 ADAMTS12P58397 1594 aa26.71■■□□□ 1.87
NKX2-2-201ENST00000377142 GRIN2BQ13224 1484 aa26.7■■□□□ 1.86
NKX2-2-201ENST00000377142 AQRO60306 1485 aaKnown RBP eCLIP26.68■■□□□ 1.86
NKX2-2-201ENST00000377142 TIAM1Q13009 1591 aa26.66■■□□□ 1.86
NKX2-2-201ENST00000377142 PCF11O94913 1555 aaKnown RBP26.64■■□□□ 1.86
NKX2-2-201ENST00000377142 SAMD9Q5K651 1589 aa26.64■■□□□ 1.86
NKX2-2-201ENST00000377142 CFAP43Q8NDM7 1665 aa26.62■■□□□ 1.85
NKX2-2-201ENST00000377142 ZNF608Q9ULD9 1512 aaPredicted RBP26.61■■□□□ 1.85
NKX2-2-201ENST00000377142 FHOD3Q2V2M9 1422 aa26.61■■□□□ 1.85
NKX2-2-201ENST00000377142 KANK4Q5T7N3 995 aaPredicted RBP26.61■■□□□ 1.85
NKX2-2-201ENST00000377142 EIF4G3O43432 1585 aaKnown RBP26.59■■□□□ 1.85
NKX2-2-201ENST00000377142 FYCO1Q9BQS8 1478 aa26.59■■□□□ 1.85
NKX2-2-201ENST00000377142 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.55■■□□□ 1.84
NKX2-2-201ENST00000377142 FMN1Q68DA7 1419 aa26.55■■□□□ 1.84
NKX2-2-201ENST00000377142 CCER1Q8TC90 406 aaPredicted RBP26.54■■□□□ 1.84
NKX2-2-201ENST00000377142 CASKIN1Q8WXD9 1431 aa26.54■■□□□ 1.84
NKX2-2-201ENST00000377142 P3H3Q8IVL6 736 aa26.53■■□□□ 1.84
NKX2-2-201ENST00000377142 RRBP1Q9P2E9 1410 aaKnown RBP26.52■■□□□ 1.84
NKX2-2-201ENST00000377142 IQGAP2Q13576 1575 aa26.51■■□□□ 1.83
NKX2-2-201ENST00000377142 LRRC9Q6ZRR7 1453 aa26.5■■□□□ 1.83
NKX2-2-201ENST00000377142 SNAPC4Q5SXM2 1469 aa26.47■■□□□ 1.83
NKX2-2-201ENST00000377142 HNRNPUL2Q1KMD3 747 aaKnown RBP26.44■■□□□ 1.82
NKX2-2-201ENST00000377142 MAGI1Q96QZ7 1491 aaPredicted RBP26.43■■□□□ 1.82
NKX2-2-201ENST00000377142 GRIN2AQ12879 1464 aa26.39■■□□□ 1.81
NKX2-2-201ENST00000377142 CCNB3Q8WWL7 1395 aa26.38■■□□□ 1.81
NKX2-2-201ENST00000377142 UGGT2Q9NYU1 1516 aa26.37■■□□□ 1.81
NKX2-2-201ENST00000377142 KIAA0586Q9BVV6 1533 aa26.34■■□□□ 1.81
NKX2-2-201ENST00000377142 LRRIQ1Q96JM4 1722 aa26.32■■□□□ 1.8
NKX2-2-201ENST00000377142 ATP1B4Q9UN42 357 aaPredicted RBP26.32■■□□□ 1.8
NKX2-2-201ENST00000377142 SYNJ2O15056 1496 aa26.32■■□□□ 1.8
NKX2-2-201ENST00000377142 HECW1Q76N89 1606 aa26.27■■□□□ 1.8
NKX2-2-201ENST00000377142 PHLDB1Q86UU1 1377 aa26.26■■□□□ 1.79
NKX2-2-201ENST00000377142 CCDC18Q5T9S5 1454 aa26.24■■□□□ 1.79
NKX2-2-201ENST00000377142 KIAA0556O60303 1618 aa26.24■■□□□ 1.79
NKX2-2-201ENST00000377142 CEP170Q5SW79 1584 aa26.21■■□□□ 1.79
NKX2-2-201ENST00000377142 EHBP1L1Q8N3D4 1523 aa26.19■■□□□ 1.78
NKX2-2-201ENST00000377142 DISP1Q96F81 1524 aa26.18■■□□□ 1.78
NKX2-2-201ENST00000377142 MTUS2Q5JR59 1369 aa26.18■■□□□ 1.78
NKX2-2-201ENST00000377142 CHMP7Q8WUX9 453 aaPredicted RBP26.18■■□□□ 1.78
NKX2-2-201ENST00000377142 NUP160Q12769 1436 aa26.16■■□□□ 1.78
NKX2-2-201ENST00000377142 SUPT6HQ7KZ85 1726 aaKnown RBP26.16■■□□□ 1.78
NKX2-2-201ENST00000377142 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.12■■□□□ 1.77
NKX2-2-201ENST00000377142 EPRSP07814 1512 aaKnown RBP26.1■■□□□ 1.77
NKX2-2-201ENST00000377142 NCOA2Q15596 1464 aa26.07■■□□□ 1.76
NKX2-2-201ENST00000377142 FGD6Q6ZV73 1430 aa26.07■■□□□ 1.76
NKX2-2-201ENST00000377142 CLSPNQ9HAW4 1339 aa26.06■■□□□ 1.76
NKX2-2-201ENST00000377142 MAGI3Q5TCQ9 1506 aa26.05■■□□□ 1.76
NKX2-2-201ENST00000377142 ARHGEF11O15085 1522 aa26.05■■□□□ 1.76
NKX2-2-201ENST00000377142 RAPGEF6Q8TEU7 1601 aa26.04■■□□□ 1.76
NKX2-2-201ENST00000377142 FBLN2P98095 1184 aa26.04■■□□□ 1.76
NKX2-2-201ENST00000377142 DHX57Q6P158 1386 aaKnown RBP26.03■■□□□ 1.76
NKX2-2-201ENST00000377142 FAM50AQ14320 339 aaKnown RBP26.02■■□□□ 1.76
NKX2-2-201ENST00000377142 ITGAEP38570 1179 aa26.02■■□□□ 1.76
NKX2-2-201ENST00000377142 MYOM3Q5VTT5 1437 aa26.02■■□□□ 1.76
NKX2-2-201ENST00000377142 CDK13Q14004 1512 aaKnown RBP26.01■■□□□ 1.75
NKX2-2-201ENST00000377142 CARMIL2Q6F5E8 1435 aa25.99■■□□□ 1.75
NKX2-2-201ENST00000377142 NUP153P49790 1475 aaKnown RBP25.96■■□□□ 1.75
NKX2-2-201ENST00000377142 SETD5Q9C0A6 1442 aa25.96■■□□□ 1.75
NKX2-2-201ENST00000377142 RAB3GAP2Q9H2M9 1393 aa25.95■■□□□ 1.74
NKX2-2-201ENST00000377142 CHD1O14646 1710 aa25.94■■□□□ 1.74
NKX2-2-201ENST00000377142 JPH4Q96JJ6 628 aa25.92■■□□□ 1.74
NKX2-2-201ENST00000377142 PTPN23Q9H3S7 1636 aa25.92■■□□□ 1.74
NKX2-2-201ENST00000377142 TCOF1Q13428 1488 aaKnown RBP25.87■■□□□ 1.73
NKX2-2-201ENST00000377142 PLB1Q6P1J6 1458 aa25.83■■□□□ 1.73
NKX2-2-201ENST00000377142 MIA2Q96PC5 1412 aa25.83■■□□□ 1.73
NKX2-2-201ENST00000377142 ABCA8O94911 1581 aa25.81■■□□□ 1.72
NKX2-2-201ENST00000377142 CDK11AQ9UQ88 783 aaPredicted RBP25.8■■□□□ 1.72
NKX2-2-201ENST00000377142 ARID3CA6NKF2 412 aa25.78■■□□□ 1.72
NKX2-2-201ENST00000377142 SHROOM2Q13796 1616 aa25.77■■□□□ 1.72
NKX2-2-201ENST00000377142 HFM1A2PYH4 1435 aa25.76■■□□□ 1.71
NKX2-2-201ENST00000377142 ADCY10Q96PN6 1610 aa25.76■■□□□ 1.71
NKX2-2-201ENST00000377142 MAPKBP1O60336 1514 aa25.75■■□□□ 1.71
NKX2-2-201ENST00000377142 TROQ12816 1431 aaPredicted RBP25.75■■□□□ 1.71
NKX2-2-201ENST00000377142 PTPRKQ15262 1439 aa25.75■■□□□ 1.71
NKX2-2-201ENST00000377142 PRG4Q92954 1404 aaPredicted RBP25.75■■□□□ 1.71
NKX2-2-201ENST00000377142 ITSN2Q9NZM3 1697 aa25.71■■□□□ 1.71
NKX2-2-201ENST00000377142 GCC2Q8IWJ2 1684 aa25.69■■□□□ 1.7
NKX2-2-201ENST00000377142 AKNAQ7Z591 1439 aa25.67■■□□□ 1.7
NKX2-2-201ENST00000377142 NAIPQ13075 1403 aa25.66■■□□□ 1.7
NKX2-2-201ENST00000377142 ZNF316A6NFI3 1004 aaPredicted RBP25.66■■□□□ 1.7
NKX2-2-201ENST00000377142 PTPRGP23470 1445 aa25.64■■□□□ 1.7
NKX2-2-201ENST00000377142 KIF14Q15058 1648 aa25.63■■□□□ 1.69
NKX2-2-201ENST00000377142 DNMT1P26358 1616 aaKnown RBP25.62■■□□□ 1.69
NKX2-2-201ENST00000377142 ATP10BO94823 1461 aa25.62■■□□□ 1.69
NKX2-2-201ENST00000377142 CLASP1Q7Z460 1538 aa25.61■■□□□ 1.69
NKX2-2-201ENST00000377142 UACAQ9BZF9 1416 aa25.59■■□□□ 1.69
NKX2-2-201ENST00000377142 DAPK1P53355 1430 aa25.56■■□□□ 1.68
NKX2-2-201ENST00000377142 GPATCH8Q9UKJ3 1502 aaKnown RBP25.55■■□□□ 1.68
NKX2-2-201ENST00000377142 DIEXFQ68CQ4 756 aaKnown RBP25.54■■□□□ 1.68
NKX2-2-201ENST00000377142 PLEKHD1A6NEE1 506 aa25.52■■□□□ 1.68
NKX2-2-201ENST00000377142 CAMSAP2Q08AD1 1489 aa25.52■■□□□ 1.68
NKX2-2-201ENST00000377142 CDC42BPAQ5VT25 1732 aa25.52■■□□□ 1.68
NKX2-2-201ENST00000377142 ROCK1Q13464 1354 aa25.51■■□□□ 1.67
NKX2-2-201ENST00000377142 ERCC6L2Q5T890 1561 aa25.5■■□□□ 1.67
NKX2-2-201ENST00000377142 ABCC10Q5T3U5 1492 aa25.5■■□□□ 1.67
NKX2-2-201ENST00000377142 ABCC5O15440 1437 aa25.49■■□□□ 1.67
NKX2-2-201ENST00000377142 ABCC2Q92887 1545 aa25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms