RNA–Protein interactions for RNA: ENST00000376919.3

SSX1-201, Transcript of SSX family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX1, Length 1,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX1-201ENST00000376919 SMARCA2P51531 1590 aa10.18□□□□□ -0.78
SSX1-201ENST00000376919 PLEKHG5O94827 1062 aa10.16□□□□□ -0.78
SSX1-201ENST00000376919 BBXQ8WY36 941 aaPredicted RBP10.16□□□□□ -0.78
SSX1-201ENST00000376919 AKT1S1Q96B36 256 aa10.16□□□□□ -0.78
SSX1-201ENST00000376919 MROH2BQ7Z745 1585 aa10.15□□□□□ -0.78
SSX1-201ENST00000376919 ZBTB47Q9UFB7 747 aaPredicted RBP10.14□□□□□ -0.79
SSX1-201ENST00000376919 KDM2AQ9Y2K7 1162 aa10.14□□□□□ -0.79
SSX1-201ENST00000376919 SPDYE1Q8NFV5 336 aaPredicted RBP10.12□□□□□ -0.79
SSX1-201ENST00000376919 BAZ1BQ9UIG0 1483 aaKnown RBP10.11□□□□□ -0.79
SSX1-201ENST00000376919 ATAD2BQ9ULI0 1458 aa10.11□□□□□ -0.79
SSX1-201ENST00000376919 WIZO95785 1651 aa10.11□□□□□ -0.79
SSX1-201ENST00000376919 ECM2O94769 699 aaPredicted RBP10.1□□□□□ -0.79
SSX1-201ENST00000376919 HMGXB3Q12766 1538 aa10.1□□□□□ -0.79
SSX1-201ENST00000376919 PEG3Q9GZU2 1588 aa10.09□□□□□ -0.79
SSX1-201ENST00000376919 PAXIP1Q6ZW49 1069 aaPredicted RBP10.09□□□□□ -0.79
SSX1-201ENST00000376919 NCAPD3P42695 1498 aa10.07□□□□□ -0.8
SSX1-201ENST00000376919 REM2Q8IYK8 340 aaPredicted RBP10.05□□□□□ -0.8
SSX1-201ENST00000376919 CFAP44Q96MT7 982 aa10.05□□□□□ -0.8
SSX1-201ENST00000376919 RSF1Q96T23 1441 aaPredicted RBP10.04□□□□□ -0.8
SSX1-201ENST00000376919 CLEC11AQ9Y240 323 aa10.03□□□□□ -0.8
SSX1-201ENST00000376919 CIZ1Q9ULV3 898 aaPredicted RBP10.02□□□□□ -0.81
SSX1-201ENST00000376919 NPM1P06748 294 aaKnown RBP eCLIP10.01□□□□□ -0.81
SSX1-201ENST00000376919 PRR29P0C7W0 189 aa10.01□□□□□ -0.81
SSX1-201ENST00000376919 TOP2AP11388 1531 aaKnown RBP9.99□□□□□ -0.81
SSX1-201ENST00000376919 RGL2O15211 777 aa9.99□□□□□ -0.81
SSX1-201ENST00000376919 CREBZFQ9NS37 354 aa9.98□□□□□ -0.81
SSX1-201ENST00000376919 SPRYD3Q8NCJ5 442 aa9.97□□□□□ -0.81
SSX1-201ENST00000376919 TRIM41Q8WV44 630 aa9.97□□□□□ -0.81
SSX1-201ENST00000376919 NUBP1P53384 320 aa9.95□□□□□ -0.82
SSX1-201ENST00000376919 GSE1Q14687 1217 aa9.94□□□□□ -0.82
SSX1-201ENST00000376919 SUPT5HO00267 1087 aaKnown RBP9.93□□□□□ -0.82
SSX1-201ENST00000376919 PITPNM1O00562 1244 aa9.93□□□□□ -0.82
SSX1-201ENST00000376919 TSHZ2Q9NRE2 1034 aa9.93□□□□□ -0.82
SSX1-201ENST00000376919 MNX1P50219 401 aaPredicted RBP9.92□□□□□ -0.82
SSX1-201ENST00000376919 NBR1Q14596 966 aa9.89□□□□□ -0.83
SSX1-201ENST00000376919 LAMC3Q9Y6N6 1575 aa9.88□□□□□ -0.83
SSX1-201ENST00000376919 ERCC6Q03468 1493 aa9.88□□□□□ -0.83
SSX1-201ENST00000376919 DCAF8Q5TAQ9 597 aa9.88□□□□□ -0.83
SSX1-201ENST00000376919 NESP48681 1621 aa9.85□□□□□ -0.83
SSX1-201ENST00000376919 POTEHQ6S545 545 aa9.85□□□□□ -0.83
SSX1-201ENST00000376919 FAM212AQ96EL1 285 aa9.85□□□□□ -0.83
SSX1-201ENST00000376919 DNAJC5Q9H3Z4 198 aa9.85□□□□□ -0.83
SSX1-201ENST00000376919 TIMELESSQ9UNS1 1208 aa9.85□□□□□ -0.83
SSX1-201ENST00000376919 PRDM2Q13029 1718 aa9.85□□□□□ -0.83
SSX1-201ENST00000376919 CHGAP10645 457 aaKnown RBP9.83□□□□□ -0.84
SSX1-201ENST00000376919 KIF21AQ7Z4S6 1674 aa9.83□□□□□ -0.84
SSX1-201ENST00000376919 RNF25Q96BH1 459 aaPredicted RBP9.82□□□□□ -0.84
SSX1-201ENST00000376919 CCDC88BA6NC98 1476 aa9.82□□□□□ -0.84
SSX1-201ENST00000376919 RASEFQ8IZ41 740 aa9.81□□□□□ -0.84
SSX1-201ENST00000376919 CADPSQ9ULU8 1353 aa9.8□□□□□ -0.84
SSX1-201ENST00000376919 TULP1O00294 542 aaPredicted RBP9.8□□□□□ -0.84
SSX1-201ENST00000376919 ERICH6Q7L0X2 663 aa9.8□□□□□ -0.84
SSX1-201ENST00000376919 PDS5BQ9NTI5 1447 aa9.8□□□□□ -0.84
SSX1-201ENST00000376919 CHRM1P11229 460 aaPredicted RBP9.79□□□□□ -0.84
SSX1-201ENST00000376919 HS6ST3Q8IZP7 471 aa9.79□□□□□ -0.84
SSX1-201ENST00000376919 RIOK3O14730 519 aaKnown RBP9.78□□□□□ -0.84
SSX1-201ENST00000376919 GTF3C3Q9Y5Q9 886 aa9.77□□□□□ -0.85
SSX1-201ENST00000376919 CFTRP13569 1480 aa9.76□□□□□ -0.85
SSX1-201ENST00000376919 CEP164Q9UPV0 1460 aa9.76□□□□□ -0.85
SSX1-201ENST00000376919 CHADLQ6NUI6 762 aa9.75□□□□□ -0.85
SSX1-201ENST00000376919 ARXQ96QS3 562 aa9.75□□□□□ -0.85
SSX1-201ENST00000376919 FANCD2Q9BXW9 1451 aa9.74□□□□□ -0.85
SSX1-201ENST00000376919 THOC2Q8NI27 1593 aaKnown RBP9.73□□□□□ -0.85
SSX1-201ENST00000376919 VGFO15240 615 aaPredicted RBP9.71□□□□□ -0.86
SSX1-201ENST00000376919 FARP1Q9Y4F1 1045 aaPredicted RBP9.71□□□□□ -0.86
SSX1-201ENST00000376919 MRC2Q9UBG0 1479 aa9.71□□□□□ -0.86
SSX1-201ENST00000376919 PYGBP11216 843 aa9.69□□□□□ -0.86
SSX1-201ENST00000376919 DAXXQ9UER7 740 aaPredicted RBP9.69□□□□□ -0.86
SSX1-201ENST00000376919 PRKAR2AP13861 404 aaKnown RBP9.68□□□□□ -0.86
SSX1-201ENST00000376919 FXR2P51116 673 aaKnown RBP eCLIP9.68□□□□□ -0.86
SSX1-201ENST00000376919 SGIP1Q9BQI5 828 aa9.68□□□□□ -0.86
SSX1-201ENST00000376919 CUX2O14529 1486 aa9.67□□□□□ -0.86
SSX1-201ENST00000376919 STK25O00506 426 aa9.66□□□□□ -0.86
SSX1-201ENST00000376919 WDR62O43379 1518 aa9.66□□□□□ -0.86
SSX1-201ENST00000376919 TSPYL2Q9H2G4 693 aaPredicted RBP9.65□□□□□ -0.86
SSX1-201ENST00000376919 NKX1-1Q15270 411 aaPredicted RBP9.64□□□□□ -0.87
SSX1-201ENST00000376919 TMEM132AQ24JP5 1023 aa9.64□□□□□ -0.87
SSX1-201ENST00000376919 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.63□□□□□ -0.87
SSX1-201ENST00000376919 ZFP91Q96JP5 570 aaPredicted RBP9.63□□□□□ -0.87
SSX1-201ENST00000376919 CHRDL2Q6WN34 429 aa9.62□□□□□ -0.87
SSX1-201ENST00000376919 DNMBPQ6XZF7 1577 aa9.62□□□□□ -0.87
SSX1-201ENST00000376919 URB2Q14146 1524 aaKnown RBP9.61□□□□□ -0.87
SSX1-201ENST00000376919 BCL11BQ9C0K0 894 aaPredicted RBP9.61□□□□□ -0.87
SSX1-201ENST00000376919 ABCC8Q09428 1581 aa9.6□□□□□ -0.87
SSX1-201ENST00000376919 GTPBP6O43824 516 aaPredicted RBP9.59□□□□□ -0.87
SSX1-201ENST00000376919 ZNF467Q7Z7K2 595 aaPredicted RBP9.59□□□□□ -0.87
SSX1-201ENST00000376919 STK24Q9Y6E0 443 aa9.59□□□□□ -0.87
SSX1-201ENST00000376919 CCDC61Q9Y6R9 512 aa9.59□□□□□ -0.87
SSX1-201ENST00000376919 TOPBP1Q92547 1522 aa9.59□□□□□ -0.87
SSX1-201ENST00000376919 PIP4P2Q8N4L2 257 aa9.58□□□□□ -0.88
SSX1-201ENST00000376919 PAK3O75914 559 aaPredicted RBP9.54□□□□□ -0.88
SSX1-201ENST00000376919 CUX1P39880 1505 aa9.54□□□□□ -0.88
SSX1-201ENST00000376919 PDAP1Q13442 181 aaKnown RBP9.53□□□□□ -0.88
SSX1-201ENST00000376919 HOMEZQ8IX15 550 aa9.53□□□□□ -0.88
SSX1-201ENST00000376919 RYDENQ9NUL5 291 aaKnown RBP9.53□□□□□ -0.88
SSX1-201ENST00000376919 WRNQ14191 1432 aaPredicted RBP eCLIP9.52□□□□□ -0.89
SSX1-201ENST00000376919 ZNF579Q8NAF0 562 aaKnown RBP9.52□□□□□ -0.89
SSX1-201ENST00000376919 PCDHB8Q9UN66 801 aa9.52□□□□□ -0.89
SSX1-201ENST00000376919 PCDHB13Q9Y5F0 798 aa9.52□□□□□ -0.89
SSX1-201ENST00000376919 BIVM-ERCC5R4GMW8 1640 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms