RNA–Protein interactions for RNA: ENST00000375025.10

CCDC7-204, Transcript of coiled-coil domain containing 7, humanhuman

TSL 2

Gene CCDC7, Length 2,729 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-204ENST00000375025 C7P10643 843 aa5.54□□□□□ -1.52
CCDC7-204ENST00000375025 POTEJP0CG39 1038 aa5.54□□□□□ -1.52
CCDC7-204ENST00000375025 CCDC61Q9Y6R9 512 aa5.54□□□□□ -1.52
CCDC7-204ENST00000375025 METRNQ9UJH8 293 aa5.52□□□□□ -1.53
CCDC7-204ENST00000375025 MAMSTRQ6ZN01 415 aa5.5□□□□□ -1.53
CCDC7-204ENST00000375025 KIF12Q96FN5 646 aa5.5□□□□□ -1.53
CCDC7-204ENST00000375025 EHMT2Q96KQ7 1210 aa5.49□□□□□ -1.53
CCDC7-204ENST00000375025 PLSCR2Q9NRY7 297 aa5.49□□□□□ -1.53
CCDC7-204ENST00000375025 POTEMA6NI47 508 aa5.48□□□□□ -1.53
CCDC7-204ENST00000375025 LCE2DQ5TA82 110 aaPredicted RBP5.48□□□□□ -1.53
CCDC7-204ENST00000375025 POTEFA5A3E0 1075 aa5.48□□□□□ -1.53
CCDC7-204ENST00000375025 TIE1P35590 1138 aa5.47□□□□□ -1.53
CCDC7-204ENST00000375025 ATN1P54259 1190 aaPredicted RBP5.47□□□□□ -1.53
CCDC7-204ENST00000375025 POTEGQ6S5H5 508 aa5.47□□□□□ -1.53
CCDC7-204ENST00000375025 SGIP1Q9BQI5 828 aa5.46□□□□□ -1.54
CCDC7-204ENST00000375025 BMP2KQ9NSY1 1161 aaPredicted RBP5.46□□□□□ -1.54
CCDC7-204ENST00000375025 TSPYL2Q9H2G4 693 aaPredicted RBP5.43□□□□□ -1.54
CCDC7-204ENST00000375025 RASEFQ8IZ41 740 aa5.42□□□□□ -1.54
CCDC7-204ENST00000375025 TRPC6Q9Y210 931 aa5.42□□□□□ -1.54
CCDC7-204ENST00000375025 IER5LQ5T953 404 aa5.42□□□□□ -1.54
CCDC7-204ENST00000375025 MAP3K13O43283 966 aa5.41□□□□□ -1.54
CCDC7-204ENST00000375025 DNAJC5Q9H3Z4 198 aa5.41□□□□□ -1.54
CCDC7-204ENST00000375025 SCUBE2Q9NQ36 999 aa5.41□□□□□ -1.54
CCDC7-204ENST00000375025 TTLL13PA6NNM8 815 aa5.39□□□□□ -1.55
CCDC7-204ENST00000375025 NUBP1P53384 320 aa5.39□□□□□ -1.55
CCDC7-204ENST00000375025 PLEKHG5O94827 1062 aa5.37□□□□□ -1.55
CCDC7-204ENST00000375025 COLQQ9Y215 455 aaPredicted RBP5.37□□□□□ -1.55
CCDC7-204ENST00000375025 MIER1Q8N108 512 aa5.35□□□□□ -1.55
CCDC7-204ENST00000375025 ZBTB47Q9UFB7 747 aaPredicted RBP5.35□□□□□ -1.55
CCDC7-204ENST00000375025 TRIM35Q9UPQ4 493 aa5.33□□□□□ -1.56
CCDC7-204ENST00000375025 IRX5P78411 483 aaPredicted RBP5.32□□□□□ -1.56
CCDC7-204ENST00000375025 IFNL1Q8IU54 200 aa5.32□□□□□ -1.56
CCDC7-204ENST00000375025 FAM163AQ96GL9 167 aaPredicted RBP5.32□□□□□ -1.56
CCDC7-204ENST00000375025 PCDHB13Q9Y5F0 798 aa5.32□□□□□ -1.56
CCDC7-204ENST00000375025 NISCHQ9Y2I1 1504 aa5.3□□□□□ -1.56
CCDC7-204ENST00000375025 SEC24BO95487 1268 aa5.29□□□□□ -1.56
CCDC7-204ENST00000375025 PLCD3Q8N3E9 789 aa5.28□□□□□ -1.56
CCDC7-204ENST00000375025 FAM212AQ96EL1 285 aa5.28□□□□□ -1.56
CCDC7-204ENST00000375025 TMEM106CQ9BVX2 250 aa5.27□□□□□ -1.57
CCDC7-204ENST00000375025 ST18O60284 1047 aa5.26□□□□□ -1.57
CCDC7-204ENST00000375025 CDAN1Q8IWY9 1227 aa5.26□□□□□ -1.57
CCDC7-204ENST00000375025 PLCG2P16885 1265 aa5.25□□□□□ -1.57
CCDC7-204ENST00000375025 TMEM121BQ9BXQ6 578 aaPredicted RBP5.25□□□□□ -1.57
CCDC7-204ENST00000375025 SLAIN1Q8ND83 568 aa5.25□□□□□ -1.57
CCDC7-204ENST00000375025 OCEL1Q9H607 264 aa5.25□□□□□ -1.57
CCDC7-204ENST00000375025 CHRM1P11229 460 aaPredicted RBP5.23□□□□□ -1.57
CCDC7-204ENST00000375025 ILDR1Q86SU0 546 aaPredicted RBP5.23□□□□□ -1.57
CCDC7-204ENST00000375025 ABCC9O60706 1549 aa5.22□□□□□ -1.57
CCDC7-204ENST00000375025 PDCD7Q8N8D1 485 aaKnown RBP5.21□□□□□ -1.58
CCDC7-204ENST00000375025 SNPHO15079 494 aa5.21□□□□□ -1.58
CCDC7-204ENST00000375025 FBXO3Q9UK99 471 aa5.19□□□□□ -1.58
CCDC7-204ENST00000375025 FKBP8Q14318 412 aa5.18□□□□□ -1.58
CCDC7-204ENST00000375025 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.18□□□□□ -1.58
CCDC7-204ENST00000375025 GSE1Q14687 1217 aa5.17□□□□□ -1.58
CCDC7-204ENST00000375025 ZNF467Q7Z7K2 595 aaPredicted RBP5.17□□□□□ -1.58
CCDC7-204ENST00000375025 PCDHB8Q9UN66 801 aa5.17□□□□□ -1.58
CCDC7-204ENST00000375025 PYGBP11216 843 aa5.17□□□□□ -1.58
CCDC7-204ENST00000375025 DCAF8Q5TAQ9 597 aa5.17□□□□□ -1.58
CCDC7-204ENST00000375025 SPNS2Q8IVW8 549 aa5.17□□□□□ -1.58
CCDC7-204ENST00000375025 MMRN1Q13201 1228 aa5.16□□□□□ -1.58
CCDC7-204ENST00000375025 L3MBTL3Q96JM7 780 aaPredicted RBP5.16□□□□□ -1.58
CCDC7-204ENST00000375025 CCDC180Q9P1Z9 1646 aa5.13□□□□□ -1.59
CCDC7-204ENST00000375025 VASPP50552 380 aaPredicted RBP5.13□□□□□ -1.59
CCDC7-204ENST00000375025 PSEN1P49768 467 aa5.1□□□□□ -1.59
CCDC7-204ENST00000375025 KRTAP3-3Q9BYR6 98 aa5.1□□□□□ -1.59
CCDC7-204ENST00000375025 KRTAP3-2Q9BYR7 98 aa5.1□□□□□ -1.59
CCDC7-204ENST00000375025 POTEB3A0JP26 581 aa5.1□□□□□ -1.59
CCDC7-204ENST00000375025 MKRN3Q13064 507 aaKnown RBP5.1□□□□□ -1.59
CCDC7-204ENST00000375025 POTEBQ6S5H4 581 aa5.1□□□□□ -1.59
CCDC7-204ENST00000375025 PDAP1Q13442 181 aaKnown RBP5.1□□□□□ -1.59
CCDC7-204ENST00000375025 HOXB3P14651 431 aaPredicted RBP5.09□□□□□ -1.6
CCDC7-204ENST00000375025 C3orf67Q6ZVT6 689 aa5.09□□□□□ -1.6
CCDC7-204ENST00000375025 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.08□□□□□ -1.6
CCDC7-204ENST00000375025 MARVELD3Q96A59 401 aa5.07□□□□□ -1.6
CCDC7-204ENST00000375025 HS3ST6Q96QI5 342 aa5.07□□□□□ -1.6
CCDC7-204ENST00000375025 EMP3P54852 163 aa5.06□□□□□ -1.6
CCDC7-204ENST00000375025 HOXB1P14653 301 aaPredicted RBP5.05□□□□□ -1.6
CCDC7-204ENST00000375025 GOLGA2Q08379 1002 aa5.05□□□□□ -1.6
CCDC7-204ENST00000375025 BOLA1Q9Y3E2 137 aa5.04□□□□□ -1.6
CCDC7-204ENST00000375025 SPOCK2Q92563 424 aa5.04□□□□□ -1.6
CCDC7-204ENST00000375025 SHROOM4Q9ULL8 1493 aa5.04□□□□□ -1.6
CCDC7-204ENST00000375025 DPY19L2Q6NUT2 758 aa5.03□□□□□ -1.6
CCDC7-204ENST00000375025 TRIM41Q8WV44 630 aa5.03□□□□□ -1.6
CCDC7-204ENST00000375025 KLHL34Q8N239 644 aa5.03□□□□□ -1.6
CCDC7-204ENST00000375025 IFNLR1Q8IU57 520 aaPredicted RBP5.02□□□□□ -1.61
CCDC7-204ENST00000375025 ZSWIM6Q9HCJ5 1215 aa5.01□□□□□ -1.61
CCDC7-204ENST00000375025 RB1CC1Q8TDY2 1594 aa5.01□□□□□ -1.61
CCDC7-204ENST00000375025 CUX2O14529 1486 aa5.01□□□□□ -1.61
CCDC7-204ENST00000375025 FAM205CA6NFA0 338 aa5.01□□□□□ -1.61
CCDC7-204ENST00000375025 DOK7Q18PE1 504 aa5□□□□□ -1.61
CCDC7-204ENST00000375025 CABP2Q9NPB3 220 aa5□□□□□ -1.61
CCDC7-204ENST00000375025 TMEM92Q6UXU6 159 aa4.97□□□□□ -1.61
CCDC7-204ENST00000375025 SOX12O15370 315 aa4.96□□□□□ -1.61
CCDC7-204ENST00000375025 MICALL2Q8IY33 904 aa4.96□□□□□ -1.62
CCDC7-204ENST00000375025 GPR153Q6NV75 609 aa4.95□□□□□ -1.62
CCDC7-204ENST00000375025 EFCAB3Q8N7B9 438 aa4.95□□□□□ -1.62
CCDC7-204ENST00000375025 G3V3G9 751 aa4.95□□□□□ -1.62
CCDC7-204ENST00000375025 ZNF687Q8N1G0 1237 aa4.95□□□□□ -1.62
CCDC7-204ENST00000375025 MS4A4AQ96JQ5 239 aa4.95□□□□□ -1.62
CCDC7-204ENST00000375025 PTGER2P43116 358 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms