RNA–Protein interactions for RNA: ENST00000374864.8

ITCH-202, Transcript of itchy E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITCH, Length 6,401 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITCH-202ENST00000374864 TSHZ2Q9NRE2 1034 aa6.05□□□□□ -1.44
ITCH-202ENST00000374864 DNAJC5BQ9UF47 199 aa6.01□□□□□ -1.45
ITCH-202ENST00000374864 CDK11AQ9UQ88 783 aaPredicted RBP6.01□□□□□ -1.45
ITCH-202ENST00000374864 EIF4G1Q04637 1599 aaKnown RBP6□□□□□ -1.45
ITCH-202ENST00000374864 SMARCA4P51532 1647 aa6□□□□□ -1.45
ITCH-202ENST00000374864 BAZ1AQ9NRL2 1556 aaPredicted RBP6□□□□□ -1.45
ITCH-202ENST00000374864 RAPGEF2Q9Y4G8 1499 aa6□□□□□ -1.45
ITCH-202ENST00000374864 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.99□□□□□ -1.453e-8■■■□□ 14.6
ITCH-202ENST00000374864 RBM19Q9Y4C8 960 aaKnown RBP5.99□□□□□ -1.45
ITCH-202ENST00000374864 WRNQ14191 1432 aaPredicted RBP eCLIP5.99□□□□□ -1.45
ITCH-202ENST00000374864 LAS1LQ9Y4W2 734 aaKnown RBP5.98□□□□□ -1.45
ITCH-202ENST00000374864 GOLGA3Q08378 1498 aa5.98□□□□□ -1.45
ITCH-202ENST00000374864 NCBP3Q53F19 620 aaKnown RBP5.98□□□□□ -1.45
ITCH-202ENST00000374864 ANP32EQ9BTT0 268 aa5.98□□□□□ -1.45
ITCH-202ENST00000374864 MRS2Q9HD23 443 aa5.97□□□□□ -1.45
ITCH-202ENST00000374864 TONSLQ96HA7 1378 aa5.97□□□□□ -1.45
ITCH-202ENST00000374864 RGL3Q3MIN7 710 aa5.97□□□□□ -1.45
ITCH-202ENST00000374864 TNIKQ9UKE5 1360 aa5.96□□□□□ -1.46
ITCH-202ENST00000374864 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.96□□□□□ -1.46
ITCH-202ENST00000374864 CC2D2AQ9P2K1 1620 aa5.96□□□□□ -1.46
ITCH-202ENST00000374864 SLC24A1O60721 1099 aa5.96□□□□□ -1.46
ITCH-202ENST00000374864 SKAP1Q86WV1 359 aa5.96□□□□□ -1.46
ITCH-202ENST00000374864 CCDC184Q52MB2 194 aa5.95□□□□□ -1.46
ITCH-202ENST00000374864 CCDC136Q96JN2 1154 aa5.95□□□□□ -1.46
ITCH-202ENST00000374864 CLSPNQ9HAW4 1339 aa5.95□□□□□ -1.46
ITCH-202ENST00000374864 ATAD2BQ9ULI0 1458 aa5.95□□□□□ -1.46
ITCH-202ENST00000374864 C11orf95C9JLR9 678 aaPredicted RBP5.94□□□□□ -1.46
ITCH-202ENST00000374864 RAB3GAP2Q9H2M9 1393 aa5.94□□□□□ -1.46
ITCH-202ENST00000374864 PLEKHG5O94827 1062 aa5.94□□□□□ -1.46
ITCH-202ENST00000374864 EIF5BO60841 1220 aaKnown RBP5.93□□□□□ -1.46
ITCH-202ENST00000374864 DHX57Q6P158 1386 aaKnown RBP5.92□□□□□ -1.46
ITCH-202ENST00000374864 PIAS4Q8N2W9 510 aaPredicted RBP5.92□□□□□ -1.46
ITCH-202ENST00000374864 CC2D1BQ5T0F9 858 aaKnown RBP5.91□□□□□ -1.46
ITCH-202ENST00000374864 SLC4A3P48751 1232 aa5.91□□□□□ -1.46
ITCH-202ENST00000374864 TNNT2P45379 298 aaPredicted RBP5.91□□□□□ -1.46
ITCH-202ENST00000374864 RTL5Q5HYW3 569 aaPredicted RBP5.91□□□□□ -1.46
ITCH-202ENST00000374864 HSPA5P11021 654 aaKnown RBP5.9□□□□□ -1.46
ITCH-202ENST00000374864 DAXXQ9UER7 740 aaPredicted RBP5.9□□□□□ -1.46
ITCH-202ENST00000374864 SPRYD3Q8NCJ5 442 aa5.9□□□□□ -1.46
ITCH-202ENST00000374864 SMARCA2P51531 1590 aa5.9□□□□□ -1.47
ITCH-202ENST00000374864 PLIN1O60240 522 aa5.89□□□□□ -1.47
ITCH-202ENST00000374864 TPRNQ4KMQ1 711 aa5.89□□□□□ -1.47
ITCH-202ENST00000374864 CCNB3Q8WWL7 1395 aa5.89□□□□□ -1.47
ITCH-202ENST00000374864 NEUROD2Q15784 382 aa5.88□□□□□ -1.47
ITCH-202ENST00000374864 NCAPD3P42695 1498 aa5.88□□□□□ -1.47
ITCH-202ENST00000374864 CHGAP10645 457 aaKnown RBP5.88□□□□□ -1.47
ITCH-202ENST00000374864 TMC1Q8TDI8 760 aa5.88□□□□□ -1.47
ITCH-202ENST00000374864 MTUS2Q5JR59 1369 aa5.88□□□□□ -1.47
ITCH-202ENST00000374864 CEP164Q9UPV0 1460 aa5.88□□□□□ -1.47
ITCH-202ENST00000374864 TOP2AP11388 1531 aaKnown RBP5.87□□□□□ -1.47
ITCH-202ENST00000374864 MSH5O43196 834 aa5.87□□□□□ -1.47
ITCH-202ENST00000374864 FHOD3Q2V2M9 1422 aa5.87□□□□□ -1.47
ITCH-202ENST00000374864 PEG3Q9GZU2 1588 aa5.87□□□□□ -1.47
ITCH-202ENST00000374864 SYNJ1O43426 1573 aa5.87□□□□□ -1.47
ITCH-202ENST00000374864 ARID4BQ4LE39 1312 aaPredicted RBP5.87□□□□□ -1.47
ITCH-202ENST00000374864 VPS8Q8N3P4 1428 aa5.87□□□□□ -1.47
ITCH-202ENST00000374864 DEKP35659 375 aaKnown RBP5.87□□□□□ -1.47
ITCH-202ENST00000374864 PPP6R1Q9UPN7 881 aa5.86□□□□□ -1.47
ITCH-202ENST00000374864 CUX2O14529 1486 aa5.86□□□□□ -1.47
ITCH-202ENST00000374864 ZBTB7CA1YPR0 619 aa5.85□□□□□ -1.47
ITCH-202ENST00000374864 RGS3P49796 1198 aa5.85□□□□□ -1.47
ITCH-202ENST00000374864 ANP32AP39687 249 aaKnown RBP5.84□□□□□ -1.47
ITCH-202ENST00000374864 WDR97A6NE52 1622 aa5.84□□□□□ -1.47
ITCH-202ENST00000374864 ZNF644Q9H582 1327 aaPredicted RBP5.84□□□□□ -1.47
ITCH-202ENST00000374864 PPP4R3CPQ6ZMV5 832 aa5.84□□□□□ -1.47
ITCH-202ENST00000374864 TDRD9Q8NDG6 1382 aaKnown RBP5.84□□□□□ -1.48
ITCH-202ENST00000374864 PAK3O75914 559 aaPredicted RBP5.84□□□□□ -1.48
ITCH-202ENST00000374864 EIF4G2P78344 907 aaKnown RBP eCLIP5.84□□□□□ -1.48
ITCH-202ENST00000374864 NUTM2DQ5VT03 806 aaPredicted RBP5.84□□□□□ -1.48
ITCH-202ENST00000374864 ZBTB47Q9UFB7 747 aaPredicted RBP5.83□□□□□ -1.48
ITCH-202ENST00000374864 HMGXB3Q12766 1538 aa5.83□□□□□ -1.48
ITCH-202ENST00000374864 CANXP27824 592 aaKnown RBP5.83□□□□□ -1.48
ITCH-202ENST00000374864 KIF21BO75037 1637 aa5.83□□□□□ -1.48
ITCH-202ENST00000374864 CCDC146Q8IYE0 955 aa5.82□□□□□ -1.48
ITCH-202ENST00000374864 L3MBTL2Q969R5 705 aa5.82□□□□□ -1.48
ITCH-202ENST00000374864 SETD5Q9C0A6 1442 aa5.82□□□□□ -1.48
ITCH-202ENST00000374864 PHLDB1Q86UU1 1377 aa5.82□□□□□ -1.48
ITCH-202ENST00000374864 ARAP1Q96P48 1450 aa5.82□□□□□ -1.48
ITCH-202ENST00000374864 SAFB2Q14151 953 aaKnown RBP eCLIP5.81□□□□□ -1.48
ITCH-202ENST00000374864 NESP48681 1621 aa5.81□□□□□ -1.48
ITCH-202ENST00000374864 NEFMP07197 916 aa5.81□□□□□ -1.48
ITCH-202ENST00000374864 DCAF11Q8TEB1 546 aa5.81□□□□□ -1.48
ITCH-202ENST00000374864 PPP1R15AO75807 674 aaPredicted RBP5.81□□□□□ -1.48
ITCH-202ENST00000374864 CARMIL1Q5VZK9 1371 aa5.8□□□□□ -1.48
ITCH-202ENST00000374864 RAD54L2Q9Y4B4 1467 aa5.8□□□□□ -1.48
ITCH-202ENST00000374864 CARD11Q9BXL7 1154 aa5.79□□□□□ -1.48
ITCH-202ENST00000374864 NOP58Q9Y2X3 529 aaKnown RBP5.79□□□□□ -1.48
ITCH-202ENST00000374864 KIF27Q86VH2 1401 aa5.79□□□□□ -1.48
ITCH-202ENST00000374864 AKNAQ7Z591 1439 aa5.78□□□□□ -1.48
ITCH-202ENST00000374864 ARID3AQ99856 593 aa5.78□□□□□ -1.48
ITCH-202ENST00000374864 IL27Q8NEV9 243 aa5.78□□□□□ -1.48
ITCH-202ENST00000374864 ANO8Q9HCE9 1232 aaPredicted RBP5.78□□□□□ -1.48
ITCH-202ENST00000374864 MPHOSPH9Q99550 1183 aa5.78□□□□□ -1.48
ITCH-202ENST00000374864 EXOC6Q8TAG9 804 aa5.78□□□□□ -1.48
ITCH-202ENST00000374864 EEA1Q15075 1411 aa5.78□□□□□ -1.48
ITCH-202ENST00000374864 FRAT1Q92837 279 aaPredicted RBP5.78□□□□□ -1.48
ITCH-202ENST00000374864 WASHC2AQ641Q2 1341 aa5.78□□□□□ -1.48
ITCH-202ENST00000374864 CDCA7LQ96GN5 454 aa5.77□□□□□ -1.49
ITCH-202ENST00000374864 HNRNPMP52272 730 aaKnown RBP eCLIP5.77□□□□□ -1.493e-6■■□□□ 12.1
ITCH-202ENST00000374864 PPM1GO15355 546 aaPredicted RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms