RNA–Protein interactions for RNA: ENST00000373956.7

PCDH15-204, Transcript of protocadherin related 15, humanhuman

TSL 5

Gene PCDH15, Length 6,931 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-204ENST00000373956 CCDC136Q96JN2 1154 aa9.02□□□□□ -0.97
PCDH15-204ENST00000373956 RSF1Q96T23 1441 aaPredicted RBP9.02□□□□□ -0.97
PCDH15-204ENST00000373956 TAOK2Q9UL54 1235 aa9.02□□□□□ -0.97
PCDH15-204ENST00000373956 ZRSR1Q15695 479 aaKnown RBP9.01□□□□□ -0.97
PCDH15-204ENST00000373956 SMARCA4P51532 1647 aa9.01□□□□□ -0.97
PCDH15-204ENST00000373956 DNTTIP2Q5QJE6 756 aaKnown RBP9.01□□□□□ -0.97
PCDH15-204ENST00000373956 C14orf37Q86TY3 774 aa9□□□□□ -0.97
PCDH15-204ENST00000373956 SENP3Q9H4L4 574 aaPredicted RBP8.99□□□□□ -0.97
PCDH15-204ENST00000373956 AMER1Q5JTC6 1135 aaPredicted RBP8.99□□□□□ -0.97
PCDH15-204ENST00000373956 SCRIBQ14160 1630 aa8.97□□□□□ -0.97
PCDH15-204ENST00000373956 IRX6P78412 446 aaPredicted RBP8.97□□□□□ -0.97
PCDH15-204ENST00000373956 MROH2BQ7Z745 1585 aa8.97□□□□□ -0.97
PCDH15-204ENST00000373956 CLSTN1O94985 981 aa8.97□□□□□ -0.97
PCDH15-204ENST00000373956 TONSLQ96HA7 1378 aa8.96□□□□□ -0.97
PCDH15-204ENST00000373956 BECN1Q14457 450 aa8.96□□□□□ -0.97
PCDH15-204ENST00000373956 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.96□□□□□ -0.97
PCDH15-204ENST00000373956 DDRGK1Q96HY6 314 aa8.96□□□□□ -0.98
PCDH15-204ENST00000373956 GOLGA6L22H0YM25 854 aa8.96□□□□□ -0.98
PCDH15-204ENST00000373956 HMGXB3Q12766 1538 aa8.96□□□□□ -0.98
PCDH15-204ENST00000373956 TMC1Q8TDI8 760 aa8.95□□□□□ -0.98
PCDH15-204ENST00000373956 NAP1L5Q96NT1 182 aaPredicted RBP8.95□□□□□ -0.98
PCDH15-204ENST00000373956 PABPN1Q86U42 306 aaKnown RBP eCLIP8.94□□□□□ -0.98
PCDH15-204ENST00000373956 CASC1Q6TDU7 716 aa8.94□□□□□ -0.98
PCDH15-204ENST00000373956 SMARCA2P51531 1590 aa8.94□□□□□ -0.98
PCDH15-204ENST00000373956 CECR2Q9BXF3 1484 aa8.93□□□□□ -0.98
PCDH15-204ENST00000373956 TOP2AP11388 1531 aaKnown RBP8.93□□□□□ -0.98
PCDH15-204ENST00000373956 GOLGA6L6A8MZA4 724 aa8.93□□□□□ -0.98
PCDH15-204ENST00000373956 HAP1P54257 671 aaPredicted RBP8.92□□□□□ -0.98
PCDH15-204ENST00000373956 DDX10Q13206 875 aaKnown RBP8.92□□□□□ -0.98
PCDH15-204ENST00000373956 PLCB2Q00722 1185 aa8.91□□□□□ -0.98
PCDH15-204ENST00000373956 NPHP1O15259 732 aa8.9□□□□□ -0.98
PCDH15-204ENST00000373956 KDM2AQ9Y2K7 1162 aa8.9□□□□□ -0.98
PCDH15-204ENST00000373956 RTN4Q9NQC3 1192 aaKnown RBP8.88□□□□□ -0.99
PCDH15-204ENST00000373956 NAP1L2Q9ULW6 460 aaPredicted RBP8.87□□□□□ -0.99
PCDH15-204ENST00000373956 ANP32EQ9BTT0 268 aa8.87□□□□□ -0.99
PCDH15-204ENST00000373956 NPM1P06748 294 aaKnown RBP eCLIP8.87□□□□□ -0.99
PCDH15-204ENST00000373956 MRS2Q9HD23 443 aa8.86□□□□□ -0.99
PCDH15-204ENST00000373956 PRM3Q9NNZ6 103 aa8.86□□□□□ -0.99
PCDH15-204ENST00000373956 NCAPD3P42695 1498 aa8.86□□□□□ -0.99
PCDH15-204ENST00000373956 CHIC2Q9UKJ5 165 aa8.85□□□□□ -0.99
PCDH15-204ENST00000373956 LAS1LQ9Y4W2 734 aaKnown RBP8.84□□□□□ -0.99
PCDH15-204ENST00000373956 PPP1R15AO75807 674 aaPredicted RBP8.84□□□□□ -0.99
PCDH15-204ENST00000373956 FTSJ3Q8IY81 847 aaKnown RBP8.82□□□□□ -1
PCDH15-204ENST00000373956 HSP90AB1P08238 724 aaKnown RBP8.82□□□□□ -1
PCDH15-204ENST00000373956 OS9Q13438 667 aaPredicted RBP8.82□□□□□ -1
PCDH15-204ENST00000373956 SENP3-EIF4A1A0A087X0R7 540 aa8.81□□□□□ -1
PCDH15-204ENST00000373956 PPM1GO15355 546 aaPredicted RBP8.81□□□□□ -1
PCDH15-204ENST00000373956 GOLGA2Q08379 1002 aa8.81□□□□□ -1
PCDH15-204ENST00000373956 DRC7Q8IY82 874 aa8.81□□□□□ -1
PCDH15-204ENST00000373956 FGD1P98174 961 aa8.8□□□□□ -1
PCDH15-204ENST00000373956 ISY1Q9ULR0 285 aaKnown RBP8.8□□□□□ -1
PCDH15-204ENST00000373956 WIZO95785 1651 aa8.8□□□□□ -1
PCDH15-204ENST00000373956 NOC3LQ8WTT2 800 aaKnown RBP8.79□□□□□ -1
PCDH15-204ENST00000373956 CHAF1AQ13111 956 aaPredicted RBP8.79□□□□□ -1
PCDH15-204ENST00000373956 HIRIP3Q9BW71 556 aaPredicted RBP8.78□□□□□ -1
PCDH15-204ENST00000373956 ATAD2BQ9ULI0 1458 aa8.78□□□□□ -1
PCDH15-204ENST00000373956 NRDCO43847 1150 aa8.77□□□□□ -1.01
PCDH15-204ENST00000373956 KIAA2012Q0VF49 1180 aa8.77□□□□□ -1.01
PCDH15-204ENST00000373956 ERICH6BQ5W0A0 696 aa8.77□□□□□ -1.01
PCDH15-204ENST00000373956 KCNJ4P48050 445 aa8.77□□□□□ -1.01
PCDH15-204ENST00000373956 PDE4CQ08493 712 aa8.77□□□□□ -1.01
PCDH15-204ENST00000373956 ARID4BQ4LE39 1312 aaPredicted RBP8.76□□□□□ -1.01
PCDH15-204ENST00000373956 CFAP53Q96M91 514 aa8.76□□□□□ -1.01
PCDH15-204ENST00000373956 PNNQ9H307 717 aaKnown RBP8.75□□□□□ -1.01
PCDH15-204ENST00000373956 MSNP26038 577 aaKnown RBP8.75□□□□□ -1.01
PCDH15-204ENST00000373956 ARID3AQ99856 593 aa8.75□□□□□ -1.01
PCDH15-204ENST00000373956 LMOD2Q6P5Q4 547 aa8.75□□□□□ -1.01
PCDH15-204ENST00000373956 GOLGA6L4A6NEF3 574 aa8.75□□□□□ -1.01
PCDH15-204ENST00000373956 L1TD1Q5T7N2 865 aaKnown RBP8.74□□□□□ -1.01
PCDH15-204ENST00000373956 SPRYD3Q8NCJ5 442 aa8.74□□□□□ -1.01
PCDH15-204ENST00000373956 PRDM2Q13029 1718 aa8.74□□□□□ -1.01
PCDH15-204ENST00000373956 GNL2Q13823 731 aaKnown RBP8.74□□□□□ -1.01
PCDH15-204ENST00000373956 MAPK8IP3Q9UPT6 1336 aa8.73□□□□□ -1.01
PCDH15-204ENST00000373956 NEUROD2Q15784 382 aa8.73□□□□□ -1.01
PCDH15-204ENST00000373956 RGS3P49796 1198 aa8.72□□□□□ -1.01
PCDH15-204ENST00000373956 A0A0U1RQG5 324 aaPredicted RBP8.72□□□□□ -1.01
PCDH15-204ENST00000373956 FRAT1Q92837 279 aaPredicted RBP8.71□□□□□ -1.01
PCDH15-204ENST00000373956 HSCBQ8IWL3 235 aa8.7□□□□□ -1.02
PCDH15-204ENST00000373956 ANO8Q9HCE9 1232 aaPredicted RBP8.7□□□□□ -1.02
PCDH15-204ENST00000373956 NOP58Q9Y2X3 529 aaKnown RBP8.69□□□□□ -1.02
PCDH15-204ENST00000373956 TSPY4P0CV99 314 aa8.69□□□□□ -1.02
PCDH15-204ENST00000373956 TSPY10P0CW01 314 aa8.69□□□□□ -1.02
PCDH15-204ENST00000373956 BIVM-ERCC5R4GMW8 1640 aa8.68□□□□□ -1.02
PCDH15-204ENST00000373956 MCCP23508 829 aa8.68□□□□□ -1.02
PCDH15-204ENST00000373956 KNSTRNQ9Y448 316 aa8.68□□□□□ -1.02
PCDH15-204ENST00000373956 MIER1Q8N108 512 aa8.67□□□□□ -1.02
PCDH15-204ENST00000373956 CSRNP3Q8WYN3 585 aa8.67□□□□□ -1.02
PCDH15-204ENST00000373956 TNNT3P45378 269 aaPredicted RBP8.67□□□□□ -1.02
PCDH15-204ENST00000373956 FBXO3Q9UK99 471 aa8.67□□□□□ -1.02
PCDH15-204ENST00000373956 EIF4G2P78344 907 aaKnown RBP eCLIP8.67□□□□□ -1.02
PCDH15-204ENST00000373956 RGL3Q3MIN7 710 aa8.66□□□□□ -1.02
PCDH15-204ENST00000373956 HSP90B1P14625 803 aaKnown RBP8.66□□□□□ -1.02
PCDH15-204ENST00000373956 RRP7BPQ9NSQ0 103 aa8.66□□□□□ -1.02
PCDH15-204ENST00000373956 SUPT16HQ9Y5B9 1047 aaKnown RBP8.65□□□□□ -1.02
PCDH15-204ENST00000373956 KCNH8Q96L42 1107 aa8.65□□□□□ -1.03
PCDH15-204ENST00000373956 GOLGA6L1Q8N7Z2 621 aa8.64□□□□□ -1.03
PCDH15-204ENST00000373956 CC2D1BQ5T0F9 858 aaKnown RBP8.64□□□□□ -1.03
PCDH15-204ENST00000373956 U2SURPO15042 1029 aaKnown RBP8.64□□□□□ -1.03
PCDH15-204ENST00000373956 NUDCQ9Y266 331 aa8.64□□□□□ -1.03
PCDH15-204ENST00000373956 POGKQ9P215 609 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms