RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 CHGAP10645 457 aaKnown RBP18.93■□□□□ 0.62
LMX1B-202ENST00000373474 IRX6P78412 446 aaPredicted RBP18.92■□□□□ 0.62
LMX1B-202ENST00000373474 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.9■□□□□ 0.62
LMX1B-202ENST00000373474 TSPY4P0CV99 314 aa18.89■□□□□ 0.61
LMX1B-202ENST00000373474 TSPY10P0CW01 314 aa18.89■□□□□ 0.61
LMX1B-202ENST00000373474 KDM2AQ9Y2K7 1162 aa18.89■□□□□ 0.61
LMX1B-202ENST00000373474 ANP32EQ9BTT0 268 aa18.89■□□□□ 0.61
LMX1B-202ENST00000373474 RRP7BPQ9NSQ0 103 aa18.86■□□□□ 0.61
LMX1B-202ENST00000373474 STAG3Q9UJ98 1225 aa18.83■□□□□ 0.61
LMX1B-202ENST00000373474 BAZ1BQ9UIG0 1483 aaKnown RBP18.83■□□□□ 0.61
LMX1B-202ENST00000373474 KIF27Q86VH2 1401 aa18.82■□□□□ 0.6
LMX1B-202ENST00000373474 TRIM44Q96DX7 344 aaPredicted RBP18.81■□□□□ 0.6
LMX1B-202ENST00000373474 DDRGK1Q96HY6 314 aa18.8■□□□□ 0.6
LMX1B-202ENST00000373474 ESF1Q9H501 851 aaKnown RBP18.8■□□□□ 0.6
LMX1B-202ENST00000373474 BAZ1AQ9NRL2 1556 aaPredicted RBP18.78■□□□□ 0.6
LMX1B-202ENST00000373474 NPM1P06748 294 aaKnown RBP eCLIP18.74■□□□□ 0.59
LMX1B-202ENST00000373474 ERICH6BQ5W0A0 696 aa18.74■□□□□ 0.59
LMX1B-202ENST00000373474 CHMP7Q8WUX9 453 aaPredicted RBP18.74■□□□□ 0.59
LMX1B-202ENST00000373474 ARXQ96QS3 562 aa18.73■□□□□ 0.59
LMX1B-202ENST00000373474 BECN1Q14457 450 aa18.71■□□□□ 0.59
LMX1B-202ENST00000373474 SUPT16HQ9Y5B9 1047 aaKnown RBP18.7■□□□□ 0.58
LMX1B-202ENST00000373474 CDK11BP21127 795 aaKnown RBP18.65■□□□□ 0.58
LMX1B-202ENST00000373474 GOLGA6L22H0YM25 854 aa18.64■□□□□ 0.58
LMX1B-202ENST00000373474 CCNB3Q8WWL7 1395 aa18.64■□□□□ 0.57
LMX1B-202ENST00000373474 MYH16Q9H6N6 1097 aa18.64■□□□□ 0.57
LMX1B-202ENST00000373474 NCLP19338 710 aaKnown RBP18.64■□□□□ 0.57
LMX1B-202ENST00000373474 SIN3AQ96ST3 1273 aa18.64■□□□□ 0.57
LMX1B-202ENST00000373474 PLEKHD1A6NEE1 506 aa18.63■□□□□ 0.57
LMX1B-202ENST00000373474 PPP4R2Q9NY27 417 aa18.63■□□□□ 0.57
LMX1B-202ENST00000373474 PPM1GO15355 546 aaPredicted RBP18.62■□□□□ 0.57
LMX1B-202ENST00000373474 CECR2Q9BXF3 1484 aa18.62■□□□□ 0.57
LMX1B-202ENST00000373474 SOGA1O94964 1423 aa18.61■□□□□ 0.57
LMX1B-202ENST00000373474 FHAD1B1AJZ9 1412 aa18.6■□□□□ 0.57
LMX1B-202ENST00000373474 CARD11Q9BXL7 1154 aa18.59■□□□□ 0.57
LMX1B-202ENST00000373474 CDCA8Q53HL2 280 aa18.59■□□□□ 0.57
LMX1B-202ENST00000373474 CFDP1Q9UEE9 299 aaPredicted RBP18.58■□□□□ 0.57
LMX1B-202ENST00000373474 NAP1L5Q96NT1 182 aaPredicted RBP18.57■□□□□ 0.56
LMX1B-202ENST00000373474 RGL3Q3MIN7 710 aa18.56■□□□□ 0.56
LMX1B-202ENST00000373474 KNSTRNQ9Y448 316 aa18.56■□□□□ 0.56
LMX1B-202ENST00000373474 TIMELESSQ9UNS1 1208 aa18.55■□□□□ 0.56
LMX1B-202ENST00000373474 VPS8Q8N3P4 1428 aa18.54■□□□□ 0.56
LMX1B-202ENST00000373474 PTMAP06454 111 aaKnown RBP18.53■□□□□ 0.56
LMX1B-202ENST00000373474 CFAP53Q96M91 514 aa18.52■□□□□ 0.56
LMX1B-202ENST00000373474 CCER2I3L3R5 266 aa18.52■□□□□ 0.55
LMX1B-202ENST00000373474 SETD5Q9C0A6 1442 aa18.51■□□□□ 0.55
LMX1B-202ENST00000373474 DNTTIP2Q5QJE6 756 aaKnown RBP18.5■□□□□ 0.55
LMX1B-202ENST00000373474 KCNH8Q96L42 1107 aa18.49■□□□□ 0.55
LMX1B-202ENST00000373474 ABCC8Q09428 1581 aa18.49■□□□□ 0.55
LMX1B-202ENST00000373474 SENP3-EIF4A1A0A087X0R7 540 aa18.49■□□□□ 0.55
LMX1B-202ENST00000373474 NOP58Q9Y2X3 529 aaKnown RBP18.48■□□□□ 0.55
LMX1B-202ENST00000373474 CCDC88BA6NC98 1476 aa18.48■□□□□ 0.55
LMX1B-202ENST00000373474 MROH2BQ7Z745 1585 aa18.47■□□□□ 0.55
LMX1B-202ENST00000373474 PLPPR3Q6T4P5 718 aa18.47■□□□□ 0.55
LMX1B-202ENST00000373474 CARMIL1Q5VZK9 1371 aa18.47■□□□□ 0.55
LMX1B-202ENST00000373474 ARHGAP35Q9NRY4 1499 aa18.46■□□□□ 0.55
LMX1B-202ENST00000373474 CUX2O14529 1486 aa18.45■□□□□ 0.54
LMX1B-202ENST00000373474 FTSJ3Q8IY81 847 aaKnown RBP18.42■□□□□ 0.54
LMX1B-202ENST00000373474 EIF4G1Q04637 1599 aaKnown RBP18.41■□□□□ 0.54
LMX1B-202ENST00000373474 B4GALNT3Q6L9W6 998 aa18.39■□□□□ 0.53
LMX1B-202ENST00000373474 ZRSR1Q15695 479 aaKnown RBP18.39■□□□□ 0.53
LMX1B-202ENST00000373474 PPP1R15AO75807 674 aaPredicted RBP18.38■□□□□ 0.53
LMX1B-202ENST00000373474 CC2D1BQ5T0F9 858 aaKnown RBP18.38■□□□□ 0.53
LMX1B-202ENST00000373474 LAS1LQ9Y4W2 734 aaKnown RBP18.38■□□□□ 0.53
LMX1B-202ENST00000373474 CASC1Q6TDU7 716 aa18.38■□□□□ 0.53
LMX1B-202ENST00000373474 HSPA5P11021 654 aaKnown RBP18.36■□□□□ 0.53
LMX1B-202ENST00000373474 RTN4Q9NQC3 1192 aaKnown RBP18.35■□□□□ 0.53
LMX1B-202ENST00000373474 KANK4Q5T7N3 995 aaPredicted RBP18.35■□□□□ 0.53
LMX1B-202ENST00000373474 TOP2AP11388 1531 aaKnown RBP18.34■□□□□ 0.53
LMX1B-202ENST00000373474 MAPK8IP3Q9UPT6 1336 aa18.34■□□□□ 0.53
LMX1B-202ENST00000373474 TMF1P82094 1093 aa18.34■□□□□ 0.53
LMX1B-202ENST00000373474 SENP3Q9H4L4 574 aaPredicted RBP18.34■□□□□ 0.53
LMX1B-202ENST00000373474 RGS3P49796 1198 aa18.33■□□□□ 0.53
LMX1B-202ENST00000373474 RAB3GAP2Q9H2M9 1393 aa18.33■□□□□ 0.52
LMX1B-202ENST00000373474 GOLGA6L6A8MZA4 724 aa18.33■□□□□ 0.52
LMX1B-202ENST00000373474 NUDCQ9Y266 331 aa18.32■□□□□ 0.52
LMX1B-202ENST00000373474 NEUROD2Q15784 382 aa18.32■□□□□ 0.52
LMX1B-202ENST00000373474 WIZO95785 1651 aa18.31■□□□□ 0.52
LMX1B-202ENST00000373474 L1TD1Q5T7N2 865 aaKnown RBP18.31■□□□□ 0.52
LMX1B-202ENST00000373474 RBM19Q9Y4C8 960 aaKnown RBP18.31■□□□□ 0.52
LMX1B-202ENST00000373474 SMARCA2P51531 1590 aa18.31■□□□□ 0.52
LMX1B-202ENST00000373474 DCAF11Q8TEB1 546 aa18.3■□□□□ 0.52
LMX1B-202ENST00000373474 MS4A1P11836 297 aa18.3■□□□□ 0.52
LMX1B-202ENST00000373474 FRAT1Q92837 279 aaPredicted RBP18.3■□□□□ 0.52
LMX1B-202ENST00000373474 CHAF1AQ13111 956 aaPredicted RBP18.29■□□□□ 0.52
LMX1B-202ENST00000373474 CHMP4BQ9H444 224 aaKnown RBP18.28■□□□□ 0.52
LMX1B-202ENST00000373474 ZBTB7CA1YPR0 619 aa18.27■□□□□ 0.51
LMX1B-202ENST00000373474 NRDCO43847 1150 aa18.27■□□□□ 0.51
LMX1B-202ENST00000373474 C14orf37Q86TY3 774 aa18.25■□□□□ 0.51
LMX1B-202ENST00000373474 PNNQ9H307 717 aaKnown RBP18.23■□□□□ 0.51
LMX1B-202ENST00000373474 KTN1Q86UP2 1357 aaKnown RBP18.23■□□□□ 0.51
LMX1B-202ENST00000373474 DEKP35659 375 aaKnown RBP18.23■□□□□ 0.51
LMX1B-202ENST00000373474 ERCC6Q03468 1493 aa18.23■□□□□ 0.51
LMX1B-202ENST00000373474 FMN1Q68DA7 1419 aa18.23■□□□□ 0.51
LMX1B-202ENST00000373474 KANK1Q14678 1352 aa18.22■□□□□ 0.51
LMX1B-202ENST00000373474 MSNP26038 577 aaKnown RBP18.22■□□□□ 0.51
LMX1B-202ENST00000373474 HSP90AB1P08238 724 aaKnown RBP18.21■□□□□ 0.51
LMX1B-202ENST00000373474 POGKQ9P215 609 aa18.21■□□□□ 0.51
LMX1B-202ENST00000373474 PKD2Q13563 968 aa18.18■□□□□ 0.5
LMX1B-202ENST00000373474 MPHOSPH9Q99550 1183 aa18.18■□□□□ 0.5
LMX1B-202ENST00000373474 U2SURPO15042 1029 aaKnown RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms