RNA–Protein interactions for RNA: ENST00000372922.8

TRERF1-204, Transcript of transcriptional regulating factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRERF1, Length 7,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-204ENST00000372922 ZBTB7CA1YPR0 619 aa13.15□□□□□ -0.3
TRERF1-204ENST00000372922 C14orf37Q86TY3 774 aa13.15□□□□□ -0.3
TRERF1-204ENST00000372922 CCDC136Q96JN2 1154 aa13.13□□□□□ -0.31
TRERF1-204ENST00000372922 HAP1P54257 671 aaPredicted RBP13.1□□□□□ -0.31
TRERF1-204ENST00000372922 KCNH8Q96L42 1107 aa13.1□□□□□ -0.31
TRERF1-204ENST00000372922 MRS2Q9HD23 443 aa13.09□□□□□ -0.31
TRERF1-204ENST00000372922 PLEKHD1A6NEE1 506 aa13.08□□□□□ -0.31
TRERF1-204ENST00000372922 ARID4BQ4LE39 1312 aaPredicted RBP13.08□□□□□ -0.32
TRERF1-204ENST00000372922 RSF1Q96T23 1441 aaPredicted RBP13.07□□□□□ -0.32
TRERF1-204ENST00000372922 NAP1L5Q96NT1 182 aaPredicted RBP13.05□□□□□ -0.32
TRERF1-204ENST00000372922 EIF4G2P78344 907 aaKnown RBP eCLIP13.04□□□□□ -0.32
TRERF1-204ENST00000372922 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.03□□□□□ -0.32
TRERF1-204ENST00000372922 CFAP53Q96M91 514 aa13.03□□□□□ -0.32
TRERF1-204ENST00000372922 ZCCHC6Q5VYS8 1495 aaKnown RBP13.02□□□□□ -0.32
TRERF1-204ENST00000372922 RRP7BPQ9NSQ0 103 aa13.02□□□□□ -0.32
TRERF1-204ENST00000372922 CDCA8Q53HL2 280 aa13.02□□□□□ -0.33
TRERF1-204ENST00000372922 RB1CC1Q8TDY2 1594 aa13.02□□□□□ -0.33
TRERF1-204ENST00000372922 DCAF1Q9Y4B6 1507 aa13.01□□□□□ -0.33
TRERF1-204ENST00000372922 CLIP1P30622 1438 aa13□□□□□ -0.33
TRERF1-204ENST00000372922 NCLP19338 710 aaKnown RBP12.99□□□□□ -0.33
TRERF1-204ENST00000372922 CCDC180Q9P1Z9 1646 aa12.99□□□□□ -0.33
TRERF1-204ENST00000372922 RGL3Q3MIN7 710 aa12.96□□□□□ -0.33
TRERF1-204ENST00000372922 BECN1Q14457 450 aa12.96□□□□□ -0.33
TRERF1-204ENST00000372922 ANP32EQ9BTT0 268 aa12.96□□□□□ -0.34
TRERF1-204ENST00000372922 KNSTRNQ9Y448 316 aa12.95□□□□□ -0.34
TRERF1-204ENST00000372922 CASC1Q6TDU7 716 aa12.94□□□□□ -0.34
TRERF1-204ENST00000372922 CFDP1Q9UEE9 299 aaPredicted RBP12.94□□□□□ -0.34
TRERF1-204ENST00000372922 PPM1GO15355 546 aaPredicted RBP12.93□□□□□ -0.34
TRERF1-204ENST00000372922 DDRGK1Q96HY6 314 aa12.92□□□□□ -0.34
TRERF1-204ENST00000372922 TULP1O00294 542 aaPredicted RBP12.91□□□□□ -0.34
TRERF1-204ENST00000372922 EEA1Q15075 1411 aa12.91□□□□□ -0.34
TRERF1-204ENST00000372922 GOLGA6L22H0YM25 854 aa12.91□□□□□ -0.34
TRERF1-204ENST00000372922 ERCC6Q03468 1493 aa12.91□□□□□ -0.34
TRERF1-204ENST00000372922 NCBP3Q53F19 620 aaKnown RBP12.91□□□□□ -0.34
TRERF1-204ENST00000372922 GOLGA3Q08378 1498 aa12.91□□□□□ -0.34
TRERF1-204ENST00000372922 POGKQ9P215 609 aa12.91□□□□□ -0.34
TRERF1-204ENST00000372922 NPHP1O15259 732 aa12.9□□□□□ -0.34
TRERF1-204ENST00000372922 ZRSR1Q15695 479 aaKnown RBP12.9□□□□□ -0.34
TRERF1-204ENST00000372922 TRIM44Q96DX7 344 aaPredicted RBP12.9□□□□□ -0.34
TRERF1-204ENST00000372922 HIRIP3Q9BW71 556 aaPredicted RBP12.9□□□□□ -0.34
TRERF1-204ENST00000372922 LMOD2Q6P5Q4 547 aa12.9□□□□□ -0.35
TRERF1-204ENST00000372922 NUDCQ9Y266 331 aa12.9□□□□□ -0.35
TRERF1-204ENST00000372922 MAPK8IP3Q9UPT6 1336 aa12.89□□□□□ -0.35
TRERF1-204ENST00000372922 FTSJ3Q8IY81 847 aaKnown RBP12.89□□□□□ -0.35
TRERF1-204ENST00000372922 BAZ1BQ9UIG0 1483 aaKnown RBP12.87□□□□□ -0.35
TRERF1-204ENST00000372922 CARD11Q9BXL7 1154 aa12.87□□□□□ -0.35
TRERF1-204ENST00000372922 IRX6P78412 446 aaPredicted RBP12.87□□□□□ -0.35
TRERF1-204ENST00000372922 KIF27Q86VH2 1401 aa12.86□□□□□ -0.35
TRERF1-204ENST00000372922 LAS1LQ9Y4W2 734 aaKnown RBP12.86□□□□□ -0.35
TRERF1-204ENST00000372922 HDGFP51858 240 aaKnown RBP12.85□□□□□ -0.35
TRERF1-204ENST00000372922 PNNQ9H307 717 aaKnown RBP12.84□□□□□ -0.35
TRERF1-204ENST00000372922 CHMP4BQ9H444 224 aaKnown RBP12.84□□□□□ -0.35
TRERF1-204ENST00000372922 ARID3AQ99856 593 aa12.84□□□□□ -0.35
TRERF1-204ENST00000372922 DNTTIP2Q5QJE6 756 aaKnown RBP12.83□□□□□ -0.35
TRERF1-204ENST00000372922 KANK1Q14678 1352 aa12.82□□□□□ -0.36
TRERF1-204ENST00000372922 WRNQ14191 1432 aaPredicted RBP eCLIP12.81□□□□□ -0.36
TRERF1-204ENST00000372922 TRHP20396 242 aaPredicted RBP12.8□□□□□ -0.36
TRERF1-204ENST00000372922 MIER1Q8N108 512 aa12.8□□□□□ -0.36
TRERF1-204ENST00000372922 CEP162Q5TB80 1403 aa12.8□□□□□ -0.36
TRERF1-204ENST00000372922 OS9Q13438 667 aaPredicted RBP12.79□□□□□ -0.36
TRERF1-204ENST00000372922 MS4A1P11836 297 aa12.79□□□□□ -0.36
TRERF1-204ENST00000372922 NEUROD2Q15784 382 aa12.79□□□□□ -0.36
TRERF1-204ENST00000372922 GOLGA2Q08379 1002 aa12.79□□□□□ -0.36
TRERF1-204ENST00000372922 NACADO15069 1562 aa12.79□□□□□ -0.36
TRERF1-204ENST00000372922 A0A0U1RQG5 324 aaPredicted RBP12.78□□□□□ -0.36
TRERF1-204ENST00000372922 PTMAP06454 111 aaKnown RBP12.77□□□□□ -0.37
TRERF1-204ENST00000372922 CEP164Q9UPV0 1460 aa12.76□□□□□ -0.37
TRERF1-204ENST00000372922 CCNB3Q8WWL7 1395 aa12.76□□□□□ -0.37
TRERF1-204ENST00000372922 U2SURPO15042 1029 aaKnown RBP12.75□□□□□ -0.37
TRERF1-204ENST00000372922 FGD1P98174 961 aa12.75□□□□□ -0.37
TRERF1-204ENST00000372922 ERICH6BQ5W0A0 696 aa12.74□□□□□ -0.37
TRERF1-204ENST00000372922 TMF1P82094 1093 aa12.73□□□□□ -0.37
TRERF1-204ENST00000372922 KCNJ4P48050 445 aa12.72□□□□□ -0.37
TRERF1-204ENST00000372922 FRAT1Q92837 279 aaPredicted RBP12.72□□□□□ -0.37
TRERF1-204ENST00000372922 EIF4G1Q04637 1599 aaKnown RBP12.71□□□□□ -0.37
TRERF1-204ENST00000372922 TNNT3P45378 269 aaPredicted RBP12.71□□□□□ -0.37
TRERF1-204ENST00000372922 MLECQ14165 292 aa12.71□□□□□ -0.37
TRERF1-204ENST00000372922 TPRNQ4KMQ1 711 aa12.71□□□□□ -0.37
TRERF1-204ENST00000372922 CC2D1BQ5T0F9 858 aaKnown RBP12.71□□□□□ -0.38
TRERF1-204ENST00000372922 FHAD1B1AJZ9 1412 aa12.71□□□□□ -0.38
TRERF1-204ENST00000372922 GOLGA6L6A8MZA4 724 aa12.7□□□□□ -0.38
TRERF1-204ENST00000372922 SRPK2P78362 688 aaKnown RBP12.7□□□□□ -0.38
TRERF1-204ENST00000372922 TNIKQ9UKE5 1360 aa12.7□□□□□ -0.38
TRERF1-204ENST00000372922 CALRP27797 417 aaKnown RBP12.69□□□□□ -0.38
TRERF1-204ENST00000372922 TAOK2Q9UL54 1235 aa12.69□□□□□ -0.38
TRERF1-204ENST00000372922 NAP1L2Q9ULW6 460 aaPredicted RBP12.69□□□□□ -0.38
TRERF1-204ENST00000372922 DEKP35659 375 aaKnown RBP12.68□□□□□ -0.38
TRERF1-204ENST00000372922 PODXL2Q9NZ53 605 aa12.68□□□□□ -0.38
TRERF1-204ENST00000372922 AEBP2Q6ZN18 517 aaPredicted RBP12.68□□□□□ -0.38
TRERF1-204ENST00000372922 SENP3-EIF4A1A0A087X0R7 540 aa12.68□□□□□ -0.38
TRERF1-204ENST00000372922 HSP90AB1P08238 724 aaKnown RBP12.67□□□□□ -0.38
TRERF1-204ENST00000372922 DCAF11Q8TEB1 546 aa12.67□□□□□ -0.38
TRERF1-204ENST00000372922 RTF1Q92541 710 aaKnown RBP12.66□□□□□ -0.38
TRERF1-204ENST00000372922 SUPT16HQ9Y5B9 1047 aaKnown RBP12.66□□□□□ -0.38
TRERF1-204ENST00000372922 SOX12O15370 315 aa12.65□□□□□ -0.38
TRERF1-204ENST00000372922 MORC1Q86VD1 984 aa12.65□□□□□ -0.38
TRERF1-204ENST00000372922 NRDCO43847 1150 aa12.64□□□□□ -0.39
TRERF1-204ENST00000372922 RGS3P49796 1198 aa12.64□□□□□ -0.39
TRERF1-204ENST00000372922 VSIG10Q8N0Z9 540 aa12.64□□□□□ -0.39
TRERF1-204ENST00000372922 MCCP23508 829 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms