RNA–Protein interactions for RNA: ENST00000372443.6

KCNMA1-209, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 5,059 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-209ENST00000372443 TNIKQ9UKE5 1360 aa28.03■■■□□ 2.08
KCNMA1-209ENST00000372443 EIF4G2P78344 907 aaKnown RBP eCLIP28.02■■■□□ 2.08
KCNMA1-209ENST00000372443 CHGAP10645 457 aaKnown RBP28.01■■■□□ 2.07
KCNMA1-209ENST00000372443 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.01■■■□□ 2.07
KCNMA1-209ENST00000372443 MROH2BQ7Z745 1585 aa27.99■■■□□ 2.07
KCNMA1-209ENST00000372443 EIF5BO60841 1220 aaKnown RBP27.97■■■□□ 2.07
KCNMA1-209ENST00000372443 PDS5BQ9NTI5 1447 aa27.96■■■□□ 2.07
KCNMA1-209ENST00000372443 SENP3-EIF4A1A0A087X0R7 540 aa27.92■■■□□ 2.06
KCNMA1-209ENST00000372443 TSPY4P0CV99 314 aa27.9■■■□□ 2.06
KCNMA1-209ENST00000372443 TSPY10P0CW01 314 aa27.9■■■□□ 2.06
KCNMA1-209ENST00000372443 SIN3AQ96ST3 1273 aa27.87■■■□□ 2.05
KCNMA1-209ENST00000372443 UPF2Q9HAU5 1272 aaKnown RBP27.87■■■□□ 2.05
KCNMA1-209ENST00000372443 TOP2AP11388 1531 aaKnown RBP27.86■■■□□ 2.05
KCNMA1-209ENST00000372443 SUPT16HQ9Y5B9 1047 aaKnown RBP27.86■■■□□ 2.05
KCNMA1-209ENST00000372443 HSP90AA1P07900 732 aaKnown RBP27.85■■■□□ 2.05
KCNMA1-209ENST00000372443 WDR43Q15061 677 aaKnown RBP eCLIP27.83■■■□□ 2.05
KCNMA1-209ENST00000372443 CEP164Q9UPV0 1460 aa27.81■■■□□ 2.04
KCNMA1-209ENST00000372443 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.79■■■□□ 2.04
KCNMA1-209ENST00000372443 CCDC88BA6NC98 1476 aa27.78■■■□□ 2.04
KCNMA1-209ENST00000372443 ATAD2BQ9ULI0 1458 aa27.75■■■□□ 2.03
KCNMA1-209ENST00000372443 SMARCA4P51532 1647 aa27.73■■■□□ 2.03
KCNMA1-209ENST00000372443 ANP32EQ9BTT0 268 aa27.73■■■□□ 2.03
KCNMA1-209ENST00000372443 ARXQ96QS3 562 aa27.73■■■□□ 2.03
KCNMA1-209ENST00000372443 SOGA1O94964 1423 aa27.71■■■□□ 2.03
KCNMA1-209ENST00000372443 CADPSQ9ULU8 1353 aa27.67■■■□□ 2.02
KCNMA1-209ENST00000372443 STAG3Q9UJ98 1225 aa27.67■■■□□ 2.02
KCNMA1-209ENST00000372443 ANP32BQ92688 251 aaKnown RBP27.66■■■□□ 2.02
KCNMA1-209ENST00000372443 RGL3Q3MIN7 710 aa27.65■■■□□ 2.02
KCNMA1-209ENST00000372443 ESF1Q9H501 851 aaKnown RBP27.64■■■□□ 2.02
KCNMA1-209ENST00000372443 GLIPR1L2Q4G1C9 344 aa27.63■■■□□ 2.01
KCNMA1-209ENST00000372443 CCNB3Q8WWL7 1395 aa27.58■■■□□ 2.01
KCNMA1-209ENST00000372443 CUX2O14529 1486 aa27.56■■■□□ 2
KCNMA1-209ENST00000372443 PLEKHD1A6NEE1 506 aa27.54■■■□□ 2
KCNMA1-209ENST00000372443 WIZO95785 1651 aa27.53■■■□□ 2
KCNMA1-209ENST00000372443 CARMIL1Q5VZK9 1371 aa27.5■■□□□ 1.99
KCNMA1-209ENST00000372443 CARD11Q9BXL7 1154 aa27.5■■□□□ 1.99
KCNMA1-209ENST00000372443 PPP4R2Q9NY27 417 aa27.5■■□□□ 1.99
KCNMA1-209ENST00000372443 CFDP1Q9UEE9 299 aaPredicted RBP27.5■■□□□ 1.99
KCNMA1-209ENST00000372443 ABCC8Q09428 1581 aa27.5■■□□□ 1.99
KCNMA1-209ENST00000372443 SENP3Q9H4L4 574 aaPredicted RBP27.48■■□□□ 1.99
KCNMA1-209ENST00000372443 B4GALNT3Q6L9W6 998 aa27.47■■□□□ 1.99
KCNMA1-209ENST00000372443 KCNH8Q96L42 1107 aa27.45■■□□□ 1.99
KCNMA1-209ENST00000372443 KANK4Q5T7N3 995 aaPredicted RBP27.45■■□□□ 1.98
KCNMA1-209ENST00000372443 FHAD1B1AJZ9 1412 aa27.43■■□□□ 1.98
KCNMA1-209ENST00000372443 PLPPR3Q6T4P5 718 aa27.42■■□□□ 1.98
KCNMA1-209ENST00000372443 VPS8Q8N3P4 1428 aa27.4■■□□□ 1.98
KCNMA1-209ENST00000372443 NCAPD3P42695 1498 aa27.4■■□□□ 1.98
KCNMA1-209ENST00000372443 DDRGK1Q96HY6 314 aa27.4■■□□□ 1.98
KCNMA1-209ENST00000372443 KNSTRNQ9Y448 316 aa27.36■■□□□ 1.97
KCNMA1-209ENST00000372443 LAS1LQ9Y4W2 734 aaKnown RBP27.32■■□□□ 1.96
KCNMA1-209ENST00000372443 TIMELESSQ9UNS1 1208 aa27.31■■□□□ 1.96
KCNMA1-209ENST00000372443 BECN1Q14457 450 aa27.3■■□□□ 1.96
KCNMA1-209ENST00000372443 CCER2I3L3R5 266 aa27.29■■□□□ 1.96
KCNMA1-209ENST00000372443 CARMIL2Q6F5E8 1435 aa27.29■■□□□ 1.96
KCNMA1-209ENST00000372443 EIF4G1Q04637 1599 aaKnown RBP27.29■■□□□ 1.96
KCNMA1-209ENST00000372443 RBM19Q9Y4C8 960 aaKnown RBP27.29■■□□□ 1.96
KCNMA1-209ENST00000372443 NEUROD2Q15784 382 aa27.28■■□□□ 1.96
KCNMA1-209ENST00000372443 NOP58Q9Y2X3 529 aaKnown RBP27.27■■□□□ 1.96
KCNMA1-209ENST00000372443 SETD5Q9C0A6 1442 aa27.27■■□□□ 1.96
KCNMA1-209ENST00000372443 RGS3P49796 1198 aa27.26■■□□□ 1.95
KCNMA1-209ENST00000372443 MYH16Q9H6N6 1097 aa27.25■■□□□ 1.95
KCNMA1-209ENST00000372443 CC2D1BQ5T0F9 858 aaKnown RBP27.23■■□□□ 1.95
KCNMA1-209ENST00000372443 HSPA5P11021 654 aaKnown RBP27.23■■□□□ 1.95
KCNMA1-209ENST00000372443 FANCD2Q9BXW9 1451 aa27.22■■□□□ 1.95
KCNMA1-209ENST00000372443 CDCA8Q53HL2 280 aa27.21■■□□□ 1.95
KCNMA1-209ENST00000372443 PPM1GO15355 546 aaPredicted RBP27.2■■□□□ 1.95
KCNMA1-209ENST00000372443 RAB3GAP2Q9H2M9 1393 aa27.19■■□□□ 1.94
KCNMA1-209ENST00000372443 FOXD1Q16676 465 aa27.16■■□□□ 1.94
KCNMA1-209ENST00000372443 DCAF11Q8TEB1 546 aa27.16■■□□□ 1.94
KCNMA1-209ENST00000372443 CFAP53Q96M91 514 aa27.16■■□□□ 1.94
KCNMA1-209ENST00000372443 RTN4Q9NQC3 1192 aaKnown RBP27.15■■□□□ 1.94
KCNMA1-209ENST00000372443 FRAT1Q92837 279 aaPredicted RBP27.13■■□□□ 1.93
KCNMA1-209ENST00000372443 TDRD9Q8NDG6 1382 aaKnown RBP27.12■■□□□ 1.93
KCNMA1-209ENST00000372443 TNNT2P45379 298 aaPredicted RBP27.11■■□□□ 1.93
KCNMA1-209ENST00000372443 FTSJ3Q8IY81 847 aaKnown RBP27.1■■□□□ 1.93
KCNMA1-209ENST00000372443 TSHZ2Q9NRE2 1034 aa27.1■■□□□ 1.93
KCNMA1-209ENST00000372443 TRIM44Q96DX7 344 aaPredicted RBP27.07■■□□□ 1.92
KCNMA1-209ENST00000372443 FMN1Q68DA7 1419 aa27.06■■□□□ 1.92
KCNMA1-209ENST00000372443 PPP1R15AO75807 674 aaPredicted RBP27.06■■□□□ 1.92
KCNMA1-209ENST00000372443 RAPGEF2Q9Y4G8 1499 aa27.05■■□□□ 1.92
KCNMA1-209ENST00000372443 ARHGAP35Q9NRY4 1499 aa27.04■■□□□ 1.92
KCNMA1-209ENST00000372443 HMGXB3Q12766 1538 aa27.03■■□□□ 1.92
KCNMA1-209ENST00000372443 PLEKHG5O94827 1062 aa27■■□□□ 1.91
KCNMA1-209ENST00000372443 GOLGA6L22H0YM25 854 aa27■■□□□ 1.91
KCNMA1-209ENST00000372443 NCLP19338 710 aaKnown RBP26.99■■□□□ 1.91
KCNMA1-209ENST00000372443 TMF1P82094 1093 aa26.98■■□□□ 1.91
KCNMA1-209ENST00000372443 PKD2Q13563 968 aa26.97■■□□□ 1.91
KCNMA1-209ENST00000372443 DEKP35659 375 aaKnown RBP26.97■■□□□ 1.91
KCNMA1-209ENST00000372443 MAPK8IP3Q9UPT6 1336 aa26.95■■□□□ 1.9
KCNMA1-209ENST00000372443 MPHOSPH9Q99550 1183 aa26.94■■□□□ 1.9
KCNMA1-209ENST00000372443 ZBTB7CA1YPR0 619 aa26.92■■□□□ 1.9
KCNMA1-209ENST00000372443 ERICH6BQ5W0A0 696 aa26.91■■□□□ 1.9
KCNMA1-209ENST00000372443 C14orf37Q86TY3 774 aa26.91■■□□□ 1.9
KCNMA1-209ENST00000372443 NUDCQ9Y266 331 aa26.9■■□□□ 1.9
KCNMA1-209ENST00000372443 U2SURPO15042 1029 aaKnown RBP26.89■■□□□ 1.9
KCNMA1-209ENST00000372443 DHX57Q6P158 1386 aaKnown RBP26.86■■□□□ 1.89
KCNMA1-209ENST00000372443 L3MBTL2Q969R5 705 aa26.86■■□□□ 1.89
KCNMA1-209ENST00000372443 RUSC2Q8N2Y8 1516 aa26.84■■□□□ 1.89
KCNMA1-209ENST00000372443 TPRNQ4KMQ1 711 aa26.84■■□□□ 1.89
KCNMA1-209ENST00000372443 RCAN3Q9UKA8 241 aa26.83■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms