RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 SCAF1Q9H7N4 1312 aaKnown RBP18.84■□□□□ 0.61
RAPGEF1-202ENST00000372190 NAP1L5Q96NT1 182 aaPredicted RBP18.84■□□□□ 0.61
RAPGEF1-202ENST00000372190 PDS5BQ9NTI5 1447 aa18.83■□□□□ 0.61
RAPGEF1-202ENST00000372190 CECR2Q9BXF3 1484 aa18.83■□□□□ 0.61
RAPGEF1-202ENST00000372190 PPP1R15AO75807 674 aaPredicted RBP18.83■□□□□ 0.61
RAPGEF1-202ENST00000372190 ANP32EQ9BTT0 268 aa18.83■□□□□ 0.61
RAPGEF1-202ENST00000372190 CLIP1P30622 1438 aa18.82■□□□□ 0.6
RAPGEF1-202ENST00000372190 AMER1Q5JTC6 1135 aaPredicted RBP18.81■□□□□ 0.6
RAPGEF1-202ENST00000372190 TONSLQ96HA7 1378 aa18.81■□□□□ 0.6
RAPGEF1-202ENST00000372190 SMARCA2P51531 1590 aa18.81■□□□□ 0.6
RAPGEF1-202ENST00000372190 EEA1Q15075 1411 aa18.78■□□□□ 0.6
RAPGEF1-202ENST00000372190 C14orf37Q86TY3 774 aa18.77■□□□□ 0.6
RAPGEF1-202ENST00000372190 EIF4G1Q04637 1599 aaKnown RBP18.76■□□□□ 0.59
RAPGEF1-202ENST00000372190 GOLGA3Q08378 1498 aa18.76■□□□□ 0.59
RAPGEF1-202ENST00000372190 SENP3Q9H4L4 574 aaPredicted RBP18.75■□□□□ 0.59
RAPGEF1-202ENST00000372190 FKBP8Q14318 412 aa18.73■□□□□ 0.59
RAPGEF1-202ENST00000372190 CFDP1Q9UEE9 299 aaPredicted RBP18.71■□□□□ 0.59
RAPGEF1-202ENST00000372190 KDM2AQ9Y2K7 1162 aa18.71■□□□□ 0.59
RAPGEF1-202ENST00000372190 RRP7BPQ9NSQ0 103 aa18.68■□□□□ 0.58
RAPGEF1-202ENST00000372190 CUX2O14529 1486 aa18.68■□□□□ 0.58
RAPGEF1-202ENST00000372190 DNTTIP2Q5QJE6 756 aaKnown RBP18.65■□□□□ 0.58
RAPGEF1-202ENST00000372190 RTN4Q9NQC3 1192 aaKnown RBP18.64■□□□□ 0.57
RAPGEF1-202ENST00000372190 PLEKHG5O94827 1062 aa18.64■□□□□ 0.57
RAPGEF1-202ENST00000372190 A0A0G2JS52 829 aa18.63■□□□□ 0.57
RAPGEF1-202ENST00000372190 ZBTB7CA1YPR0 619 aa18.63■□□□□ 0.57
RAPGEF1-202ENST00000372190 CEP164Q9UPV0 1460 aa18.61■□□□□ 0.57
RAPGEF1-202ENST00000372190 CARMIL1Q5VZK9 1371 aa18.6■□□□□ 0.57
RAPGEF1-202ENST00000372190 HAP1P54257 671 aaPredicted RBP18.59■□□□□ 0.57
RAPGEF1-202ENST00000372190 MROH2BQ7Z745 1585 aa18.59■□□□□ 0.57
RAPGEF1-202ENST00000372190 PTMAP06454 111 aaKnown RBP18.58■□□□□ 0.57
RAPGEF1-202ENST00000372190 SOGA1O94964 1423 aa18.58■□□□□ 0.56
RAPGEF1-202ENST00000372190 DDRGK1Q96HY6 314 aa18.57■□□□□ 0.56
RAPGEF1-202ENST00000372190 CALRP27797 417 aaKnown RBP18.57■□□□□ 0.56
RAPGEF1-202ENST00000372190 TNNT3P45378 269 aaPredicted RBP18.55■□□□□ 0.56
RAPGEF1-202ENST00000372190 CCDC88BA6NC98 1476 aa18.55■□□□□ 0.56
RAPGEF1-202ENST00000372190 MLECQ14165 292 aa18.55■□□□□ 0.56
RAPGEF1-202ENST00000372190 CARMIL2Q6F5E8 1435 aa18.55■□□□□ 0.56
RAPGEF1-202ENST00000372190 CEP162Q5TB80 1403 aa18.54■□□□□ 0.56
RAPGEF1-202ENST00000372190 GOLGA6L22H0YM25 854 aa18.51■□□□□ 0.55
RAPGEF1-202ENST00000372190 TDRD9Q8NDG6 1382 aaKnown RBP18.51■□□□□ 0.55
RAPGEF1-202ENST00000372190 CCNB3Q8WWL7 1395 aa18.51■□□□□ 0.55
RAPGEF1-202ENST00000372190 RGL3Q3MIN7 710 aa18.5■□□□□ 0.55
RAPGEF1-202ENST00000372190 MYO15BQ96JP2 1530 aa18.5■□□□□ 0.55
RAPGEF1-202ENST00000372190 CADPSQ9ULU8 1353 aa18.49■□□□□ 0.55
RAPGEF1-202ENST00000372190 BECN1Q14457 450 aa18.48■□□□□ 0.55
RAPGEF1-202ENST00000372190 HNRNPUQ00839 825 aaKnown RBP eCLIP18.47■□□□□ 0.55
RAPGEF1-202ENST00000372190 PPM1GO15355 546 aaPredicted RBP18.47■□□□□ 0.55
RAPGEF1-202ENST00000372190 CCDC136Q96JN2 1154 aa18.46■□□□□ 0.55
RAPGEF1-202ENST00000372190 FHAD1B1AJZ9 1412 aa18.43■□□□□ 0.54
RAPGEF1-202ENST00000372190 TNIKQ9UKE5 1360 aa18.43■□□□□ 0.54
RAPGEF1-202ENST00000372190 TMC1Q8TDI8 760 aa18.43■□□□□ 0.54
RAPGEF1-202ENST00000372190 KANK1Q14678 1352 aa18.42■□□□□ 0.54
RAPGEF1-202ENST00000372190 TOP2AP11388 1531 aaKnown RBP18.41■□□□□ 0.54
RAPGEF1-202ENST00000372190 DDX10Q13206 875 aaKnown RBP18.4■□□□□ 0.54
RAPGEF1-202ENST00000372190 WDR43Q15061 677 aaKnown RBP eCLIP18.39■□□□□ 0.53
RAPGEF1-202ENST00000372190 ATAD2BQ9ULI0 1458 aa18.39■□□□□ 0.53
RAPGEF1-202ENST00000372190 WIZO95785 1651 aa18.38■□□□□ 0.53
RAPGEF1-202ENST00000372190 PTMSP20962 102 aa18.38■□□□□ 0.53
RAPGEF1-202ENST00000372190 FAM9BQ8IZU0 186 aa18.38■□□□□ 0.53
RAPGEF1-202ENST00000372190 HDGFP51858 240 aaKnown RBP18.37■□□□□ 0.53
RAPGEF1-202ENST00000372190 LMOD2Q6P5Q4 547 aa18.37■□□□□ 0.53
RAPGEF1-202ENST00000372190 CHAF1AQ13111 956 aaPredicted RBP18.37■□□□□ 0.53
RAPGEF1-202ENST00000372190 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.36■□□□□ 0.53
RAPGEF1-202ENST00000372190 POGKQ9P215 609 aa18.36■□□□□ 0.53
RAPGEF1-202ENST00000372190 ABCC8Q09428 1581 aa18.34■□□□□ 0.53
RAPGEF1-202ENST00000372190 SMARCA4P51532 1647 aa18.32■□□□□ 0.52
RAPGEF1-202ENST00000372190 GGT6Q6P531 493 aa18.32■□□□□ 0.52
RAPGEF1-202ENST00000372190 SALL2Q9Y467 1007 aaPredicted RBP18.32■□□□□ 0.52
RAPGEF1-202ENST00000372190 OSCARQ8IYS5 282 aa18.31■□□□□ 0.52
RAPGEF1-202ENST00000372190 FANCD2Q9BXW9 1451 aa18.3■□□□□ 0.52
RAPGEF1-202ENST00000372190 ZRSR1Q15695 479 aaKnown RBP18.3■□□□□ 0.52
RAPGEF1-202ENST00000372190 MIER1Q8N108 512 aa18.29■□□□□ 0.52
RAPGEF1-202ENST00000372190 EIF4G2P78344 907 aaKnown RBP eCLIP18.29■□□□□ 0.529e-7■■■■■ 46.8
RAPGEF1-202ENST00000372190 GOLGA6L6A8MZA4 724 aa18.28■□□□□ 0.52
RAPGEF1-202ENST00000372190 DEKP35659 375 aaKnown RBP18.27■□□□□ 0.52
RAPGEF1-202ENST00000372190 CDCA8Q53HL2 280 aa18.27■□□□□ 0.52
RAPGEF1-202ENST00000372190 MSNP26038 577 aaKnown RBP18.26■□□□□ 0.51
RAPGEF1-202ENST00000372190 EFCAB2Q5VUJ9 269 aa18.26■□□□□ 0.51
RAPGEF1-202ENST00000372190 CYB5RLQ6IPT4 315 aa18.26■□□□□ 0.51
RAPGEF1-202ENST00000372190 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.25■□□□□ 0.51
RAPGEF1-202ENST00000372190 L1TD1Q5T7N2 865 aaKnown RBP18.24■□□□□ 0.51
RAPGEF1-202ENST00000372190 NRDCO43847 1150 aa18.23■□□□□ 0.51
RAPGEF1-202ENST00000372190 JPH4Q96JJ6 628 aa18.22■□□□□ 0.51
RAPGEF1-202ENST00000372190 CARD11Q9BXL7 1154 aa18.21■□□□□ 0.51
RAPGEF1-202ENST00000372190 HIRIP3Q9BW71 556 aaPredicted RBP18.19■□□□□ 0.5
RAPGEF1-202ENST00000372190 CFAP53Q96M91 514 aa18.19■□□□□ 0.5
RAPGEF1-202ENST00000372190 NOP58Q9Y2X3 529 aaKnown RBP18.19■□□□□ 0.5
RAPGEF1-202ENST00000372190 FMN1Q68DA7 1419 aa18.18■□□□□ 0.5
RAPGEF1-202ENST00000372190 MRS2Q9HD23 443 aa18.18■□□□□ 0.5
RAPGEF1-202ENST00000372190 IRX6P78412 446 aaPredicted RBP18.17■□□□□ 0.5
RAPGEF1-202ENST00000372190 VSIG10Q8N0Z9 540 aa18.16■□□□□ 0.5
RAPGEF1-202ENST00000372190 KNSTRNQ9Y448 316 aa18.16■□□□□ 0.5
RAPGEF1-202ENST00000372190 ARHGAP35Q9NRY4 1499 aa18.15■□□□□ 0.5
RAPGEF1-202ENST00000372190 RAPGEF2Q9Y4G8 1499 aa18.15■□□□□ 0.5
RAPGEF1-202ENST00000372190 SETQ01105 290 aaPredicted RBP18.12■□□□□ 0.49
RAPGEF1-202ENST00000372190 AEBP2Q6ZN18 517 aaPredicted RBP18.12■□□□□ 0.49
RAPGEF1-202ENST00000372190 PNNQ9H307 717 aaKnown RBP18.12■□□□□ 0.49
RAPGEF1-202ENST00000372190 APPP05067 770 aa18.11■□□□□ 0.49
RAPGEF1-202ENST00000372190 LAS1LQ9Y4W2 734 aaKnown RBP18.11■□□□□ 0.49
RAPGEF1-202ENST00000372190 HSP90AA2PQ14568 343 aaPredicted RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms