RNA–Protein interactions for RNA: ENST00000370817.3

COL21A1-202, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 3

Gene COL21A1, Length 624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-202ENST00000370817 MIER1Q8N108 512 aa16.14■□□□□ 0.17
COL21A1-202ENST00000370817 SCRIBQ14160 1630 aa16.12■□□□□ 0.17
COL21A1-202ENST00000370817 POTEIP0CG38 1075 aa16.12■□□□□ 0.17
COL21A1-202ENST00000370817 PHF12Q96QT6 1004 aa16.11■□□□□ 0.17
COL21A1-202ENST00000370817 GALR2O43603 387 aaPredicted RBP16.07■□□□□ 0.16
COL21A1-202ENST00000370817 PLEKHG5O94827 1062 aa16.07■□□□□ 0.16
COL21A1-202ENST00000370817 PLCD3Q8N3E9 789 aa16.04■□□□□ 0.16
COL21A1-202ENST00000370817 DCBLD2Q96PD2 775 aa16.02■□□□□ 0.16
COL21A1-202ENST00000370817 TSPYL2Q9H2G4 693 aaPredicted RBP16.02■□□□□ 0.16
COL21A1-202ENST00000370817 SHROOM4Q9ULL8 1493 aa15.98■□□□□ 0.15
COL21A1-202ENST00000370817 RASEFQ8IZ41 740 aa15.94■□□□□ 0.14
COL21A1-202ENST00000370817 CCDC61Q9Y6R9 512 aa15.94■□□□□ 0.14
COL21A1-202ENST00000370817 LHX8Q68G74 356 aa15.9■□□□□ 0.14
COL21A1-202ENST00000370817 MS4A3Q96HJ5 214 aa15.9■□□□□ 0.14
COL21A1-202ENST00000370817 ZBTB47Q9UFB7 747 aaPredicted RBP15.88■□□□□ 0.13
COL21A1-202ENST00000370817 FBXO3Q9UK99 471 aa15.88■□□□□ 0.13
COL21A1-202ENST00000370817 NUBP1P53384 320 aa15.84■□□□□ 0.13
COL21A1-202ENST00000370817 KIF12Q96FN5 646 aa15.82■□□□□ 0.12
COL21A1-202ENST00000370817 MAP3K13O43283 966 aa15.75■□□□□ 0.11
COL21A1-202ENST00000370817 PELP1Q8IZL8 1130 aaKnown RBP15.75■□□□□ 0.11
COL21A1-202ENST00000370817 VASPP50552 380 aaPredicted RBP15.73■□□□□ 0.11
COL21A1-202ENST00000370817 ASTLQ6HA08 431 aaPredicted RBP15.73■□□□□ 0.11
COL21A1-202ENST00000370817 ATMINO43313 823 aaPredicted RBP15.71■□□□□ 0.11
COL21A1-202ENST00000370817 FAM212AQ96EL1 285 aa15.69■□□□□ 0.1
COL21A1-202ENST00000370817 EIF4G1Q04637 1599 aaKnown RBP15.68■□□□□ 0.1
COL21A1-202ENST00000370817 TRPC6Q9Y210 931 aa15.68■□□□□ 0.1
COL21A1-202ENST00000370817 BMP2KQ9NSY1 1161 aaPredicted RBP15.62■□□□□ 0.09
COL21A1-202ENST00000370817 POTEB2H3BUK9 544 aa15.61■□□□□ 0.09
COL21A1-202ENST00000370817 ATN1P54259 1190 aaPredicted RBP15.61■□□□□ 0.09
COL21A1-202ENST00000370817 PCDHB13Q9Y5F0 798 aa15.6■□□□□ 0.09
COL21A1-202ENST00000370817 CC2D2AQ9P2K1 1620 aa15.59■□□□□ 0.09
COL21A1-202ENST00000370817 KLHL34Q8N239 644 aa15.59■□□□□ 0.09
COL21A1-202ENST00000370817 SGIP1Q9BQI5 828 aa15.59■□□□□ 0.09
COL21A1-202ENST00000370817 METRNQ9UJH8 293 aa15.59■□□□□ 0.09
COL21A1-202ENST00000370817 TIE1P35590 1138 aa15.58■□□□□ 0.08
COL21A1-202ENST00000370817 SLC39A7Q92504 469 aa15.58■□□□□ 0.08
COL21A1-202ENST00000370817 DCAF8Q5TAQ9 597 aa15.57■□□□□ 0.08
COL21A1-202ENST00000370817 C7P10643 843 aa15.55■□□□□ 0.08
COL21A1-202ENST00000370817 IFNL1Q8IU54 200 aa15.53■□□□□ 0.08
COL21A1-202ENST00000370817 TTLL13PA6NNM8 815 aa15.51■□□□□ 0.07
COL21A1-202ENST00000370817 PYGBP11216 843 aa15.5■□□□□ 0.07
COL21A1-202ENST00000370817 CECR2Q9BXF3 1484 aa15.48■□□□□ 0.07
COL21A1-202ENST00000370817 SMARCA4P51532 1647 aa15.48■□□□□ 0.07
COL21A1-202ENST00000370817 IFNLR1Q8IU57 520 aaPredicted RBP15.48■□□□□ 0.07
COL21A1-202ENST00000370817 OTUD5Q96G74 571 aa15.48■□□□□ 0.07
COL21A1-202ENST00000370817 BAZ1AQ9NRL2 1556 aaPredicted RBP15.43■□□□□ 0.06
COL21A1-202ENST00000370817 POTEFA5A3E0 1075 aa15.42■□□□□ 0.06
COL21A1-202ENST00000370817 GSE1Q14687 1217 aa15.42■□□□□ 0.06
COL21A1-202ENST00000370817 POTEJP0CG39 1038 aa15.41■□□□□ 0.06
COL21A1-202ENST00000370817 TRIM35Q9UPQ4 493 aa15.41■□□□□ 0.06
COL21A1-202ENST00000370817 TMEM106CQ9BVX2 250 aa15.39■□□□□ 0.05
COL21A1-202ENST00000370817 PEG3Q9GZU2 1588 aa15.37■□□□□ 0.05
COL21A1-202ENST00000370817 SPOCK2Q92563 424 aa15.37■□□□□ 0.05
COL21A1-202ENST00000370817 PCDHB8Q9UN66 801 aa15.36■□□□□ 0.05
COL21A1-202ENST00000370817 MROH2BQ7Z745 1585 aa15.36■□□□□ 0.05
COL21A1-202ENST00000370817 COLQQ9Y215 455 aaPredicted RBP15.34■□□□□ 0.05
COL21A1-202ENST00000370817 IER5LQ5T953 404 aa15.32■□□□□ 0.04
COL21A1-202ENST00000370817 ATAD2BQ9ULI0 1458 aa15.32■□□□□ 0.04
COL21A1-202ENST00000370817 SMARCA2P51531 1590 aa15.32■□□□□ 0.04
COL21A1-202ENST00000370817 SEC24BO95487 1268 aa15.3■□□□□ 0.04
COL21A1-202ENST00000370817 NCAPD3P42695 1498 aa15.3■□□□□ 0.04
COL21A1-202ENST00000370817 HMGXB3Q12766 1538 aa15.29■□□□□ 0.04
COL21A1-202ENST00000370817 CHRM1P11229 460 aaPredicted RBP15.29■□□□□ 0.04
COL21A1-202ENST00000370817 MAMSTRQ6ZN01 415 aa15.26■□□□□ 0.03
COL21A1-202ENST00000370817 ZNF467Q7Z7K2 595 aaPredicted RBP15.26■□□□□ 0.03
COL21A1-202ENST00000370817 CIZ1Q9ULV3 898 aaPredicted RBP15.26■□□□□ 0.03
COL21A1-202ENST00000370817 WIZO95785 1651 aa15.23■□□□□ 0.03
COL21A1-202ENST00000370817 SCUBE2Q9NQ36 999 aa15.21■□□□□ 0.03
COL21A1-202ENST00000370817 IRX5P78411 483 aaPredicted RBP15.18■□□□□ 0.02
COL21A1-202ENST00000370817 RSF1Q96T23 1441 aaPredicted RBP15.17■□□□□ 0.02
COL21A1-202ENST00000370817 BAZ1BQ9UIG0 1483 aaKnown RBP15.16■□□□□ 0.02
COL21A1-202ENST00000370817 PLCG2P16885 1265 aa15.16■□□□□ 0.02
COL21A1-202ENST00000370817 PSEN1P49768 467 aa15.14■□□□□ 0.01
COL21A1-202ENST00000370817 OCEL1Q9H607 264 aa15.1■□□□□ 0.01
COL21A1-202ENST00000370817 PDAP1Q13442 181 aaKnown RBP15.08■□□□□ 0
COL21A1-202ENST00000370817 TOP2AP11388 1531 aaKnown RBP15.06■□□□□ 0
COL21A1-202ENST00000370817 GOLGA2Q08379 1002 aa15.04■□□□□ -0
COL21A1-202ENST00000370817 TRIM41Q8WV44 630 aa15.04■□□□□ -0
COL21A1-202ENST00000370817 MKRN3Q13064 507 aaKnown RBP15.02■□□□□ -0
COL21A1-202ENST00000370817 PDCD7Q8N8D1 485 aaKnown RBP15□□□□□ -0.01
COL21A1-202ENST00000370817 LCE2DQ5TA82 110 aaPredicted RBP14.97□□□□□ -0.01
COL21A1-202ENST00000370817 POTEMA6NI47 508 aa14.96□□□□□ -0.01
COL21A1-202ENST00000370817 CABP2Q9NPB3 220 aa14.96□□□□□ -0.01
COL21A1-202ENST00000370817 SLAIN1Q8ND83 568 aa14.95□□□□□ -0.02
COL21A1-202ENST00000370817 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.95□□□□□ -0.02
COL21A1-202ENST00000370817 FAM163AQ96GL9 167 aaPredicted RBP14.94□□□□□ -0.02
COL21A1-202ENST00000370817 POTEGQ6S5H5 508 aa14.93□□□□□ -0.02
COL21A1-202ENST00000370817 RNF25Q96BH1 459 aaPredicted RBP14.92□□□□□ -0.02
COL21A1-202ENST00000370817 LAMC3Q9Y6N6 1575 aa14.92□□□□□ -0.02
COL21A1-202ENST00000370817 ILDR1Q86SU0 546 aaPredicted RBP14.9□□□□□ -0.02
COL21A1-202ENST00000370817 NESP48681 1621 aa14.89□□□□□ -0.03
COL21A1-202ENST00000370817 PRDM2Q13029 1718 aa14.87□□□□□ -0.03
COL21A1-202ENST00000370817 RIOK3O14730 519 aaKnown RBP14.86□□□□□ -0.03
COL21A1-202ENST00000370817 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.86□□□□□ -0.03
COL21A1-202ENST00000370817 DPY19L2Q6NUT2 758 aa14.84□□□□□ -0.03
COL21A1-202ENST00000370817 L3MBTL3Q96JM7 780 aaPredicted RBP14.84□□□□□ -0.03
COL21A1-202ENST00000370817 KIF21AQ7Z4S6 1674 aa14.83□□□□□ -0.04
COL21A1-202ENST00000370817 CCDC88BA6NC98 1476 aa14.82□□□□□ -0.04
COL21A1-202ENST00000370817 EFCAB3Q8N7B9 438 aa14.81□□□□□ -0.04
COL21A1-202ENST00000370817 C3orf67Q6ZVT6 689 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms