RNA–Protein interactions for RNA: ENST00000368648.7

EBF3-202, Transcript of early B cell factor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene EBF3, Length 4,375 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-202ENST00000368648 WRNQ14191 1432 aaPredicted RBP eCLIP14.81□□□□□ -0.04
EBF3-202ENST00000368648 PDS5BQ9NTI5 1447 aa14.8□□□□□ -0.04
EBF3-202ENST00000368648 CADPSQ9ULU8 1353 aa14.8□□□□□ -0.04
EBF3-202ENST00000368648 CCDC136Q96JN2 1154 aa14.79□□□□□ -0.04
EBF3-202ENST00000368648 CCDC88BA6NC98 1476 aa14.78□□□□□ -0.04
EBF3-202ENST00000368648 KCNH8Q96L42 1107 aa14.77□□□□□ -0.05
EBF3-202ENST00000368648 CHIC2Q9UKJ5 165 aa14.77□□□□□ -0.05
EBF3-202ENST00000368648 UNC13AQ9UPW8 1703 aa14.76□□□□□ -0.05
EBF3-202ENST00000368648 NCAPD3P42695 1498 aa14.75□□□□□ -0.05
EBF3-202ENST00000368648 DEKP35659 375 aaKnown RBP14.75□□□□□ -0.05
EBF3-202ENST00000368648 B4GALNT3Q6L9W6 998 aa14.73□□□□□ -0.05
EBF3-202ENST00000368648 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.73□□□□□ -0.05
EBF3-202ENST00000368648 LAS1LQ9Y4W2 734 aaKnown RBP14.72□□□□□ -0.05
EBF3-202ENST00000368648 ESF1Q9H501 851 aaKnown RBP14.71□□□□□ -0.05
EBF3-202ENST00000368648 MRS2Q9HD23 443 aa14.7□□□□□ -0.06
EBF3-202ENST00000368648 NESP48681 1621 aa14.69□□□□□ -0.06
EBF3-202ENST00000368648 CHGAP10645 457 aaKnown RBP14.69□□□□□ -0.06
EBF3-202ENST00000368648 SIN3AQ96ST3 1273 aa14.68□□□□□ -0.06
EBF3-202ENST00000368648 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.68□□□□□ -0.06
EBF3-202ENST00000368648 CLIP1P30622 1438 aa14.68□□□□□ -0.06
EBF3-202ENST00000368648 MTUS2Q5JR59 1369 aa14.67□□□□□ -0.06
EBF3-202ENST00000368648 KIF27Q86VH2 1401 aa14.65□□□□□ -0.06
EBF3-202ENST00000368648 TONSLQ96HA7 1378 aa14.64□□□□□ -0.07
EBF3-202ENST00000368648 TOP2AP11388 1531 aaKnown RBP14.64□□□□□ -0.07
EBF3-202ENST00000368648 TDRD9Q8NDG6 1382 aaKnown RBP14.64□□□□□ -0.07
EBF3-202ENST00000368648 CEP162Q5TB80 1403 aa14.61□□□□□ -0.07
EBF3-202ENST00000368648 TSPY4P0CV99 314 aa14.6□□□□□ -0.07
EBF3-202ENST00000368648 TSPY10P0CW01 314 aa14.6□□□□□ -0.07
EBF3-202ENST00000368648 FANCD2Q9BXW9 1451 aa14.6□□□□□ -0.07
EBF3-202ENST00000368648 STAG3Q9UJ98 1225 aa14.59□□□□□ -0.07
EBF3-202ENST00000368648 CEP164Q9UPV0 1460 aa14.59□□□□□ -0.07
EBF3-202ENST00000368648 PLEKHD1A6NEE1 506 aa14.58□□□□□ -0.08
EBF3-202ENST00000368648 SENP3Q9H4L4 574 aaPredicted RBP14.58□□□□□ -0.08
EBF3-202ENST00000368648 NOP58Q9Y2X3 529 aaKnown RBP14.58□□□□□ -0.08
EBF3-202ENST00000368648 CUX2O14529 1486 aa14.57□□□□□ -0.08
EBF3-202ENST00000368648 NEFMP07197 916 aa14.57□□□□□ -0.08
EBF3-202ENST00000368648 SOGA1O94964 1423 aa14.55□□□□□ -0.08
EBF3-202ENST00000368648 GOLGA3Q08378 1498 aa14.54□□□□□ -0.08
EBF3-202ENST00000368648 EEA1Q15075 1411 aa14.53□□□□□ -0.08
EBF3-202ENST00000368648 RRP7BPQ9NSQ0 103 aa14.53□□□□□ -0.08
EBF3-202ENST00000368648 CANXP27824 592 aaKnown RBP14.53□□□□□ -0.08
EBF3-202ENST00000368648 TMC1Q8TDI8 760 aa14.53□□□□□ -0.08
EBF3-202ENST00000368648 ABCC8Q09428 1581 aa14.51□□□□□ -0.09
EBF3-202ENST00000368648 CARMIL1Q5VZK9 1371 aa14.5□□□□□ -0.09
EBF3-202ENST00000368648 PPP4R2Q9NY27 417 aa14.48□□□□□ -0.09
EBF3-202ENST00000368648 CFDP1Q9UEE9 299 aaPredicted RBP14.45□□□□□ -0.1
EBF3-202ENST00000368648 ARID4BQ4LE39 1312 aaPredicted RBP14.45□□□□□ -0.1
EBF3-202ENST00000368648 KDM2AQ9Y2K7 1162 aa14.45□□□□□ -0.1
EBF3-202ENST00000368648 HMGXB3Q12766 1538 aa14.45□□□□□ -0.1
EBF3-202ENST00000368648 TRHP20396 242 aaPredicted RBP14.44□□□□□ -0.1
EBF3-202ENST00000368648 GLIPR1L2Q4G1C9 344 aa14.43□□□□□ -0.1
EBF3-202ENST00000368648 TNIKQ9UKE5 1360 aa14.41□□□□□ -0.1
EBF3-202ENST00000368648 ANO8Q9HCE9 1232 aaPredicted RBP14.41□□□□□ -0.1
EBF3-202ENST00000368648 SLC24A1O60721 1099 aa14.4□□□□□ -0.1
EBF3-202ENST00000368648 OSCARQ8IYS5 282 aa14.39□□□□□ -0.11
EBF3-202ENST00000368648 EIF4G2P78344 907 aaKnown RBP eCLIP14.38□□□□□ -0.11
EBF3-202ENST00000368648 CFTRP13569 1480 aa14.37□□□□□ -0.11
EBF3-202ENST00000368648 CYB5RLQ6IPT4 315 aa14.36□□□□□ -0.11
EBF3-202ENST00000368648 RAD54L2Q9Y4B4 1467 aa14.36□□□□□ -0.11
EBF3-202ENST00000368648 RGS3P49796 1198 aa14.36□□□□□ -0.11
EBF3-202ENST00000368648 HSP90AA1P07900 732 aaKnown RBP14.36□□□□□ -0.11
EBF3-202ENST00000368648 RGL3Q3MIN7 710 aa14.35□□□□□ -0.11
EBF3-202ENST00000368648 KANK4Q5T7N3 995 aaPredicted RBP14.34□□□□□ -0.11
EBF3-202ENST00000368648 AQRO60306 1485 aaKnown RBP eCLIP14.34□□□□□ -0.11
EBF3-202ENST00000368648 NAP1L5Q96NT1 182 aaPredicted RBP14.34□□□□□ -0.11
EBF3-202ENST00000368648 PLEKHG5O94827 1062 aa14.31□□□□□ -0.12
EBF3-202ENST00000368648 MRC2Q9UBG0 1479 aa14.3□□□□□ -0.12
EBF3-202ENST00000368648 FGD5Q6ZNL6 1462 aa14.29□□□□□ -0.12
EBF3-202ENST00000368648 MLECQ14165 292 aa14.29□□□□□ -0.12
EBF3-202ENST00000368648 PRKCSHP14314 528 aaPredicted RBP14.28□□□□□ -0.12
EBF3-202ENST00000368648 PPM1GO15355 546 aaPredicted RBP14.27□□□□□ -0.12
EBF3-202ENST00000368648 UPF2Q9HAU5 1272 aaKnown RBP14.27□□□□□ -0.13
EBF3-202ENST00000368648 PPP1R15AO75807 674 aaPredicted RBP14.27□□□□□ -0.13
EBF3-202ENST00000368648 SLC4A3P48751 1232 aa14.26□□□□□ -0.13
EBF3-202ENST00000368648 SPRYD3Q8NCJ5 442 aa14.26□□□□□ -0.13
EBF3-202ENST00000368648 TIMELESSQ9UNS1 1208 aa14.24□□□□□ -0.13
EBF3-202ENST00000368648 ERICH6BQ5W0A0 696 aa14.24□□□□□ -0.13
EBF3-202ENST00000368648 CCNB3Q8WWL7 1395 aa14.24□□□□□ -0.13
EBF3-202ENST00000368648 ANP32BQ92688 251 aaKnown RBP14.24□□□□□ -0.13
EBF3-202ENST00000368648 IL27Q8NEV9 243 aa14.23□□□□□ -0.13
EBF3-202ENST00000368648 JPH4Q96JJ6 628 aa14.23□□□□□ -0.13
EBF3-202ENST00000368648 ARID3AQ99856 593 aa14.23□□□□□ -0.13
EBF3-202ENST00000368648 LAMC3Q9Y6N6 1575 aa14.22□□□□□ -0.13
EBF3-202ENST00000368648 FHAD1B1AJZ9 1412 aa14.22□□□□□ -0.13
EBF3-202ENST00000368648 CCER2I3L3R5 266 aa14.21□□□□□ -0.14
EBF3-202ENST00000368648 DDRGK1Q96HY6 314 aa14.2□□□□□ -0.14
EBF3-202ENST00000368648 IPO9Q96P70 1041 aaKnown RBP14.2□□□□□ -0.14
EBF3-202ENST00000368648 CARMIL2Q6F5E8 1435 aa14.2□□□□□ -0.14
EBF3-202ENST00000368648 FOXD1Q16676 465 aa14.2□□□□□ -0.14
EBF3-202ENST00000368648 TOPBP1Q92547 1522 aa14.19□□□□□ -0.14
EBF3-202ENST00000368648 TPRNQ4KMQ1 711 aa14.19□□□□□ -0.14
EBF3-202ENST00000368648 GZF1Q9H116 711 aaPredicted RBP14.19□□□□□ -0.14
EBF3-202ENST00000368648 PEG3Q9GZU2 1588 aa14.19□□□□□ -0.14
EBF3-202ENST00000368648 GAPVD1Q14C86 1478 aa14.18□□□□□ -0.14
EBF3-202ENST00000368648 C14orf37Q86TY3 774 aa14.18□□□□□ -0.14
EBF3-202ENST00000368648 TRIM44Q96DX7 344 aaPredicted RBP14.18□□□□□ -0.14
EBF3-202ENST00000368648 MSH5O43196 834 aa14.18□□□□□ -0.14
EBF3-202ENST00000368648 PAK3O75914 559 aaPredicted RBP14.18□□□□□ -0.14
EBF3-202ENST00000368648 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.18□□□□□ -0.14
EBF3-202ENST00000368648 RUSC2Q8N2Y8 1516 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms