RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 CIZ1Q9ULV3 898 aaPredicted RBP11.25□□□□□ -0.61
ECHDC1-204ENST00000368292 PAK3O75914 559 aaPredicted RBP11.24□□□□□ -0.61
ECHDC1-204ENST00000368292 PKD2Q13563 968 aa11.24□□□□□ -0.61
ECHDC1-204ENST00000368292 RTN4Q9NQC3 1192 aaKnown RBP11.21□□□□□ -0.61
ECHDC1-204ENST00000368292 ZNF579Q8NAF0 562 aaKnown RBP11.2□□□□□ -0.62
ECHDC1-204ENST00000368292 AMER1Q5JTC6 1135 aaPredicted RBP11.19□□□□□ -0.62
ECHDC1-204ENST00000368292 PHF12Q96QT6 1004 aa11.18□□□□□ -0.62
ECHDC1-204ENST00000368292 PYGBP11216 843 aa11.16□□□□□ -0.62
ECHDC1-204ENST00000368292 CHRM1P11229 460 aaPredicted RBP11.15□□□□□ -0.62
ECHDC1-204ENST00000368292 KIF12Q96FN5 646 aa11.15□□□□□ -0.62
ECHDC1-204ENST00000368292 TRIM41Q8WV44 630 aa11.12□□□□□ -0.63
ECHDC1-204ENST00000368292 MAP3K13O43283 966 aa11.11□□□□□ -0.63
ECHDC1-204ENST00000368292 ECM2O94769 699 aaPredicted RBP11.11□□□□□ -0.63
ECHDC1-204ENST00000368292 SP7Q8TDD2 431 aaPredicted RBP11.09□□□□□ -0.63
ECHDC1-204ENST00000368292 GABBR2O75899 941 aa11.07□□□□□ -0.64
ECHDC1-204ENST00000368292 RNF25Q96BH1 459 aaPredicted RBP11.07□□□□□ -0.64
ECHDC1-204ENST00000368292 SGIP1Q9BQI5 828 aa11.06□□□□□ -0.64
ECHDC1-204ENST00000368292 MS4A3Q96HJ5 214 aa11.05□□□□□ -0.64
ECHDC1-204ENST00000368292 RGL2O15211 777 aa11.04□□□□□ -0.64
ECHDC1-204ENST00000368292 GALR2O43603 387 aaPredicted RBP11.04□□□□□ -0.64
ECHDC1-204ENST00000368292 CLCN6P51797 869 aa11.04□□□□□ -0.64
ECHDC1-204ENST00000368292 IFNL1Q8IU54 200 aa11.04□□□□□ -0.64
ECHDC1-204ENST00000368292 PCDHB13Q9Y5F0 798 aa11.04□□□□□ -0.64
ECHDC1-204ENST00000368292 PCDHB8Q9UN66 801 aa11.03□□□□□ -0.64
ECHDC1-204ENST00000368292 NISCHQ9Y2I1 1504 aa11.01□□□□□ -0.65
ECHDC1-204ENST00000368292 TRPC6Q9Y210 931 aa11□□□□□ -0.65
ECHDC1-204ENST00000368292 RIOK3O14730 519 aaKnown RBP10.98□□□□□ -0.65
ECHDC1-204ENST00000368292 ZNF467Q7Z7K2 595 aaPredicted RBP10.98□□□□□ -0.65
ECHDC1-204ENST00000368292 ABCC9O60706 1549 aa10.91□□□□□ -0.66
ECHDC1-204ENST00000368292 VGFO15240 615 aaPredicted RBP10.9□□□□□ -0.66
ECHDC1-204ENST00000368292 PSEN1P49768 467 aa10.9□□□□□ -0.66
ECHDC1-204ENST00000368292 PDAP1Q13442 181 aaKnown RBP10.9□□□□□ -0.66
ECHDC1-204ENST00000368292 TIE1P35590 1138 aa10.89□□□□□ -0.67
ECHDC1-204ENST00000368292 BMP2KQ9NSY1 1161 aaPredicted RBP10.89□□□□□ -0.67
ECHDC1-204ENST00000368292 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.88□□□□□ -0.67
ECHDC1-204ENST00000368292 ZFP91Q96JP5 570 aaPredicted RBP10.88□□□□□ -0.67
ECHDC1-204ENST00000368292 POTEIP0CG38 1075 aa10.87□□□□□ -0.67
ECHDC1-204ENST00000368292 TTLL13PA6NNM8 815 aa10.86□□□□□ -0.67
ECHDC1-204ENST00000368292 ATMINO43313 823 aaPredicted RBP10.85□□□□□ -0.67
ECHDC1-204ENST00000368292 ASTLQ6HA08 431 aaPredicted RBP10.85□□□□□ -0.67
ECHDC1-204ENST00000368292 TMEM106CQ9BVX2 250 aa10.85□□□□□ -0.67
ECHDC1-204ENST00000368292 TAOK2Q9UL54 1235 aa10.84□□□□□ -0.67
ECHDC1-204ENST00000368292 ATN1P54259 1190 aaPredicted RBP10.83□□□□□ -0.68
ECHDC1-204ENST00000368292 DCBLD2Q96PD2 775 aa10.83□□□□□ -0.68
ECHDC1-204ENST00000368292 DCAF8L2P0C7V8 631 aa10.82□□□□□ -0.68
ECHDC1-204ENST00000368292 SLC24A1O60721 1099 aa10.81□□□□□ -0.68
ECHDC1-204ENST00000368292 PELP1Q8IZL8 1130 aaKnown RBP10.81□□□□□ -0.68
ECHDC1-204ENST00000368292 BCL11BQ9C0K0 894 aaPredicted RBP10.8□□□□□ -0.68
ECHDC1-204ENST00000368292 STK25O00506 426 aa10.79□□□□□ -0.68
ECHDC1-204ENST00000368292 CHGAP10645 457 aaKnown RBP10.79□□□□□ -0.68
ECHDC1-204ENST00000368292 HS6ST3Q8IZP7 471 aa10.79□□□□□ -0.68
ECHDC1-204ENST00000368292 TRIM35Q9UPQ4 493 aa10.77□□□□□ -0.69
ECHDC1-204ENST00000368292 STK24Q9Y6E0 443 aa10.77□□□□□ -0.69
ECHDC1-204ENST00000368292 CABP2Q9NPB3 220 aa10.75□□□□□ -0.69
ECHDC1-204ENST00000368292 DNAJC5Q9H3Z4 198 aa10.73□□□□□ -0.69
ECHDC1-204ENST00000368292 EFCAB3Q8N7B9 438 aa10.71□□□□□ -0.69
ECHDC1-204ENST00000368292 NKX1-1Q15270 411 aaPredicted RBP10.68□□□□□ -0.7
ECHDC1-204ENST00000368292 GOLGA2Q08379 1002 aa10.67□□□□□ -0.7
ECHDC1-204ENST00000368292 IER5LQ5T953 404 aa10.67□□□□□ -0.7
ECHDC1-204ENST00000368292 MKRN3Q13064 507 aaKnown RBP10.66□□□□□ -0.7
ECHDC1-204ENST00000368292 ILDR1Q86SU0 546 aaPredicted RBP10.66□□□□□ -0.7
ECHDC1-204ENST00000368292 SLC39A7Q92504 469 aa10.66□□□□□ -0.7
ECHDC1-204ENST00000368292 POTEFA5A3E0 1075 aa10.65□□□□□ -0.7
ECHDC1-204ENST00000368292 C7P10643 843 aa10.65□□□□□ -0.7
ECHDC1-204ENST00000368292 IRX5P78411 483 aaPredicted RBP10.65□□□□□ -0.7
ECHDC1-204ENST00000368292 SOX12O15370 315 aa10.64□□□□□ -0.71
ECHDC1-204ENST00000368292 BBXQ8WY36 941 aaPredicted RBP10.64□□□□□ -0.71
ECHDC1-204ENST00000368292 METRNQ9UJH8 293 aa10.64□□□□□ -0.71
ECHDC1-204ENST00000368292 MFRPQ9BY79 579 aa10.63□□□□□ -0.71
ECHDC1-204ENST00000368292 COLQQ9Y215 455 aaPredicted RBP10.63□□□□□ -0.71
ECHDC1-204ENST00000368292 PHF8Q9UPP1 1060 aa10.62□□□□□ -0.71
ECHDC1-204ENST00000368292 PDCD7Q8N8D1 485 aaKnown RBP10.61□□□□□ -0.71
ECHDC1-204ENST00000368292 FBXO22Q8NEZ5 403 aa10.61□□□□□ -0.71
ECHDC1-204ENST00000368292 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.61□□□□□ -0.713e-7■■□□□ 13.1
ECHDC1-204ENST00000368292 MS4A4AQ96JQ5 239 aa10.59□□□□□ -0.71
ECHDC1-204ENST00000368292 OCEL1Q9H607 264 aa10.59□□□□□ -0.71
ECHDC1-204ENST00000368292 NLRP6P59044 892 aa10.57□□□□□ -0.72
ECHDC1-204ENST00000368292 GTPBP6O43824 516 aaPredicted RBP10.56□□□□□ -0.72
ECHDC1-204ENST00000368292 SEC24BO95487 1268 aa10.56□□□□□ -0.72
ECHDC1-204ENST00000368292 DPY19L2Q6NUT2 758 aa10.56□□□□□ -0.72
ECHDC1-204ENST00000368292 PLCG2P16885 1265 aa10.54□□□□□ -0.72
ECHDC1-204ENST00000368292 POTEB2H3BUK9 544 aa10.53□□□□□ -0.72
ECHDC1-204ENST00000368292 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.52□□□□□ -0.73
ECHDC1-204ENST00000368292 PPP1R37O75864 691 aa10.51□□□□□ -0.73
ECHDC1-204ENST00000368292 POTEJP0CG39 1038 aa10.5□□□□□ -0.73
ECHDC1-204ENST00000368292 PAXIP1Q6ZW49 1069 aaPredicted RBP10.49□□□□□ -0.73
ECHDC1-204ENST00000368292 SPRYD3Q8NCJ5 442 aa10.48□□□□□ -0.73
ECHDC1-204ENST00000368292 RYDENQ9NUL5 291 aaKnown RBP10.47□□□□□ -0.73
ECHDC1-204ENST00000368292 CFAP44Q96MT7 982 aa10.45□□□□□ -0.74
ECHDC1-204ENST00000368292 L3MBTL3Q96JM7 780 aaPredicted RBP10.43□□□□□ -0.74
ECHDC1-204ENST00000368292 TMEM121BQ9BXQ6 578 aaPredicted RBP10.43□□□□□ -0.74
ECHDC1-204ENST00000368292 BOLA1Q9Y3E2 137 aa10.43□□□□□ -0.74
ECHDC1-204ENST00000368292 PLCB2Q00722 1185 aa10.42□□□□□ -0.74
ECHDC1-204ENST00000368292 LHX8Q68G74 356 aa10.41□□□□□ -0.74
ECHDC1-204ENST00000368292 MICALL2Q8IY33 904 aa10.41□□□□□ -0.74
ECHDC1-204ENST00000368292 OTUD5Q96G74 571 aa10.35□□□□□ -0.75
ECHDC1-204ENST00000368292 G3V3G9 751 aa10.33□□□□□ -0.76
ECHDC1-204ENST00000368292 TMEM92Q6UXU6 159 aa10.32□□□□□ -0.76
ECHDC1-204ENST00000368292 CADPS2Q86UW7 1296 aa10.32□□□□□ -0.76
ECHDC1-204ENST00000368292 TSHZ2Q9NRE2 1034 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms