RNA–Protein interactions for RNA: ENST00000367505.6

SHPRH-203, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SHPRH, Length 7,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-203ENST00000367505 BECN1Q14457 450 aa10.96□□□□□ -0.65
SHPRH-203ENST00000367505 SALL2Q9Y467 1007 aaPredicted RBP10.96□□□□□ -0.65
SHPRH-203ENST00000367505 TIMELESSQ9UNS1 1208 aa10.96□□□□□ -0.66
SHPRH-203ENST00000367505 PPM1GO15355 546 aaPredicted RBP10.94□□□□□ -0.66
SHPRH-203ENST00000367505 IRX6P78412 446 aaPredicted RBP10.93□□□□□ -0.66
SHPRH-203ENST00000367505 PPP4R2Q9NY27 417 aa10.93□□□□□ -0.66
SHPRH-203ENST00000367505 NACADO15069 1562 aa10.93□□□□□ -0.66
SHPRH-203ENST00000367505 KIF27Q86VH2 1401 aa10.92□□□□□ -0.66
SHPRH-203ENST00000367505 HIRIP3Q9BW71 556 aaPredicted RBP10.9□□□□□ -0.66
SHPRH-203ENST00000367505 SUPT16HQ9Y5B9 1047 aaKnown RBP10.9□□□□□ -0.66
SHPRH-203ENST00000367505 CHGAP10645 457 aaKnown RBP10.9□□□□□ -0.66
SHPRH-203ENST00000367505 KDM2AQ9Y2K7 1162 aa10.89□□□□□ -0.67
SHPRH-203ENST00000367505 CDCA8Q53HL2 280 aa10.89□□□□□ -0.67
SHPRH-203ENST00000367505 MYH16Q9H6N6 1097 aa10.88□□□□□ -0.67
SHPRH-203ENST00000367505 RRP7BPQ9NSQ0 103 aa10.88□□□□□ -0.67
SHPRH-203ENST00000367505 CCER2I3L3R5 266 aa10.88□□□□□ -0.67
SHPRH-203ENST00000367505 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.87□□□□□ -0.671e-6■■□□□ 11.8
SHPRH-203ENST00000367505 ESF1Q9H501 851 aaKnown RBP10.87□□□□□ -0.67
SHPRH-203ENST00000367505 BAZ1AQ9NRL2 1556 aaPredicted RBP10.87□□□□□ -0.67
SHPRH-203ENST00000367505 STAG3Q9UJ98 1225 aa10.87□□□□□ -0.67
SHPRH-203ENST00000367505 GOLGA6L22H0YM25 854 aa10.86□□□□□ -0.67
SHPRH-203ENST00000367505 CCNB3Q8WWL7 1395 aa10.86□□□□□ -0.67
SHPRH-203ENST00000367505 ERICH6BQ5W0A0 696 aa10.86□□□□□ -0.67
SHPRH-203ENST00000367505 TRIM44Q96DX7 344 aaPredicted RBP10.85□□□□□ -0.67
SHPRH-203ENST00000367505 FHAD1B1AJZ9 1412 aa10.85□□□□□ -0.67
SHPRH-203ENST00000367505 NOP58Q9Y2X3 529 aaKnown RBP10.84□□□□□ -0.67
SHPRH-203ENST00000367505 NPM1P06748 294 aaKnown RBP eCLIP10.83□□□□□ -0.68
SHPRH-203ENST00000367505 BAZ1BQ9UIG0 1483 aaKnown RBP10.83□□□□□ -0.68
SHPRH-203ENST00000367505 CFAP53Q96M91 514 aa10.81□□□□□ -0.68
SHPRH-203ENST00000367505 KNSTRNQ9Y448 316 aa10.81□□□□□ -0.68
SHPRH-203ENST00000367505 PLEKHD1A6NEE1 506 aa10.8□□□□□ -0.68
SHPRH-203ENST00000367505 VPS8Q8N3P4 1428 aa10.8□□□□□ -0.68
SHPRH-203ENST00000367505 NCLP19338 710 aaKnown RBP10.8□□□□□ -0.68
SHPRH-203ENST00000367505 ARXQ96QS3 562 aa10.79□□□□□ -0.68
SHPRH-203ENST00000367505 CARD11Q9BXL7 1154 aa10.79□□□□□ -0.68
SHPRH-203ENST00000367505 CHMP7Q8WUX9 453 aaPredicted RBP10.79□□□□□ -0.68
SHPRH-203ENST00000367505 CFDP1Q9UEE9 299 aaPredicted RBP10.77□□□□□ -0.69
SHPRH-203ENST00000367505 SIN3AQ96ST3 1273 aa10.77□□□□□ -0.69
SHPRH-203ENST00000367505 CHMP4BQ9H444 224 aaKnown RBP10.76□□□□□ -0.69
SHPRH-203ENST00000367505 MS4A1P11836 297 aa10.76□□□□□ -0.69
SHPRH-203ENST00000367505 SETD5Q9C0A6 1442 aa10.76□□□□□ -0.69
SHPRH-203ENST00000367505 RBM19Q9Y4C8 960 aaKnown RBP10.74□□□□□ -0.69
SHPRH-203ENST00000367505 CASC1Q6TDU7 716 aa10.73□□□□□ -0.69
SHPRH-203ENST00000367505 FTSJ3Q8IY81 847 aaKnown RBP10.73□□□□□ -0.69
SHPRH-203ENST00000367505 TNNT2P45379 298 aaPredicted RBP10.73□□□□□ -0.69
SHPRH-203ENST00000367505 B4GALNT3Q6L9W6 998 aa10.72□□□□□ -0.69
SHPRH-203ENST00000367505 RGL3Q3MIN7 710 aa10.72□□□□□ -0.69
SHPRH-203ENST00000367505 SOGA1O94964 1423 aa10.71□□□□□ -0.69
SHPRH-203ENST00000367505 NUDCQ9Y266 331 aa10.7□□□□□ -0.7
SHPRH-203ENST00000367505 LAS1LQ9Y4W2 734 aaKnown RBP10.69□□□□□ -0.7
SHPRH-203ENST00000367505 CARMIL1Q5VZK9 1371 aa10.68□□□□□ -0.7
SHPRH-203ENST00000367505 ARHGAP35Q9NRY4 1499 aa10.68□□□□□ -0.7
SHPRH-203ENST00000367505 CECR2Q9BXF3 1484 aa10.68□□□□□ -0.7
SHPRH-203ENST00000367505 L1TD1Q5T7N2 865 aaKnown RBP10.68□□□□□ -0.7
SHPRH-203ENST00000367505 PTMAP06454 111 aaKnown RBP10.68□□□□□ -0.7
SHPRH-203ENST00000367505 TMF1P82094 1093 aa10.67□□□□□ -0.7
SHPRH-203ENST00000367505 MAPK8IP3Q9UPT6 1336 aa10.67□□□□□ -0.7
SHPRH-203ENST00000367505 DEKP35659 375 aaKnown RBP10.67□□□□□ -0.7
SHPRH-203ENST00000367505 RGS3P49796 1198 aa10.67□□□□□ -0.7
SHPRH-203ENST00000367505 PNNQ9H307 717 aaKnown RBP10.67□□□□□ -0.7
SHPRH-203ENST00000367505 CFAP44Q96MT7 982 aa10.67□□□□□ -0.7
SHPRH-203ENST00000367505 TCERG1O14776 1098 aaKnown RBP10.65□□□□□ -0.7
SHPRH-203ENST00000367505 NAP1L5Q96NT1 182 aaPredicted RBP10.64□□□□□ -0.71
SHPRH-203ENST00000367505 HSPA5P11021 654 aaKnown RBP10.64□□□□□ -0.71
SHPRH-203ENST00000367505 RAB3GAP2Q9H2M9 1393 aa10.63□□□□□ -0.71
SHPRH-203ENST00000367505 CUX2O14529 1486 aa10.63□□□□□ -0.71
SHPRH-203ENST00000367505 ZRSR1Q15695 479 aaKnown RBP10.63□□□□□ -0.71
SHPRH-203ENST00000367505 DNTTIP2Q5QJE6 756 aaKnown RBP10.63□□□□□ -0.71
SHPRH-203ENST00000367505 ARID4BQ4LE39 1312 aaPredicted RBP10.63□□□□□ -0.71
SHPRH-203ENST00000367505 TSHZ2Q9NRE2 1034 aa10.63□□□□□ -0.71
SHPRH-203ENST00000367505 HSP90AB1P08238 724 aaKnown RBP10.62□□□□□ -0.71
SHPRH-203ENST00000367505 RALBP1Q15311 655 aa10.62□□□□□ -0.71
SHPRH-203ENST00000367505 CCDC88BA6NC98 1476 aa10.62□□□□□ -0.71
SHPRH-203ENST00000367505 HSCBQ8IWL3 235 aa10.62□□□□□ -0.71
SHPRH-203ENST00000367505 PPP1R15AO75807 674 aaPredicted RBP10.61□□□□□ -0.71
SHPRH-203ENST00000367505 FRAT1Q92837 279 aaPredicted RBP10.61□□□□□ -0.71
SHPRH-203ENST00000367505 KTN1Q86UP2 1357 aaKnown RBP10.61□□□□□ -0.71
SHPRH-203ENST00000367505 PTMSP20962 102 aa10.61□□□□□ -0.71
SHPRH-203ENST00000367505 KCNH8Q96L42 1107 aa10.61□□□□□ -0.71
SHPRH-203ENST00000367505 MROH2BQ7Z745 1585 aa10.6□□□□□ -0.71
SHPRH-203ENST00000367505 FMN1Q68DA7 1419 aa10.6□□□□□ -0.71
SHPRH-203ENST00000367505 CC2D1BQ5T0F9 858 aaKnown RBP10.6□□□□□ -0.71
SHPRH-203ENST00000367505 DCAF11Q8TEB1 546 aa10.6□□□□□ -0.71
SHPRH-203ENST00000367505 HAP1P54257 671 aaPredicted RBP10.6□□□□□ -0.71
SHPRH-203ENST00000367505 NEUROD2Q15784 382 aa10.59□□□□□ -0.71
SHPRH-203ENST00000367505 RCAN3Q9UKA8 241 aa10.59□□□□□ -0.71
SHPRH-203ENST00000367505 KANK4Q5T7N3 995 aaPredicted RBP10.58□□□□□ -0.72
SHPRH-203ENST00000367505 ABCC8Q09428 1581 aa10.58□□□□□ -0.72
SHPRH-203ENST00000367505 PDE3BQ13370 1112 aa10.58□□□□□ -0.72
SHPRH-203ENST00000367505 SENP3-EIF4A1A0A087X0R7 540 aa10.58□□□□□ -0.72
SHPRH-203ENST00000367505 RTN4Q9NQC3 1192 aaKnown RBP10.58□□□□□ -0.72
SHPRH-203ENST00000367505 CDK11BP21127 795 aaKnown RBP10.57□□□□□ -0.72
SHPRH-203ENST00000367505 ROCK2O75116 1388 aaKnown RBP10.57□□□□□ -0.72
SHPRH-203ENST00000367505 IPO9Q96P70 1041 aaKnown RBP10.56□□□□□ -0.72
SHPRH-203ENST00000367505 NRDCO43847 1150 aa10.56□□□□□ -0.72
SHPRH-203ENST00000367505 SMARCA2P51531 1590 aa10.56□□□□□ -0.72
SHPRH-203ENST00000367505 KANK1Q14678 1352 aa10.56□□□□□ -0.72
SHPRH-203ENST00000367505 GOLGA6L6A8MZA4 724 aa10.55□□□□□ -0.72
SHPRH-203ENST00000367505 TOP2AP11388 1531 aaKnown RBP10.55□□□□□ -0.72
SHPRH-203ENST00000367505 MSNP26038 577 aaKnown RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms