RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 MYH16Q9H6N6 1097 aa17.66■□□□□ 0.42
CCDC144A-203ENST00000360495 PPP4R2Q9NY27 417 aa17.63■□□□□ 0.41
CCDC144A-203ENST00000360495 PABPN1Q86U42 306 aaKnown RBP eCLIP17.56■□□□□ 0.4
CCDC144A-203ENST00000360495 EIF4G2P78344 907 aaKnown RBP eCLIP17.55■□□□□ 0.4
CCDC144A-203ENST00000360495 AMER1Q5JTC6 1135 aaPredicted RBP17.54■□□□□ 0.4
CCDC144A-203ENST00000360495 FBLN2P98095 1184 aa17.54■□□□□ 0.4
CCDC144A-203ENST00000360495 RBM19Q9Y4C8 960 aaKnown RBP17.53■□□□□ 0.4
CCDC144A-203ENST00000360495 CHGAP10645 457 aaKnown RBP17.53■□□□□ 0.4
CCDC144A-203ENST00000360495 ZRSR1Q15695 479 aaKnown RBP17.52■□□□□ 0.39
CCDC144A-203ENST00000360495 TPRNQ4KMQ1 711 aa17.51■□□□□ 0.39
CCDC144A-203ENST00000360495 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.51■□□□□ 0.39
CCDC144A-203ENST00000360495 L1TD1Q5T7N2 865 aaKnown RBP17.5■□□□□ 0.39
CCDC144A-203ENST00000360495 CHIC2Q9UKJ5 165 aa17.5■□□□□ 0.39
CCDC144A-203ENST00000360495 SENP3-EIF4A1A0A087X0R7 540 aa17.5■□□□□ 0.39
CCDC144A-203ENST00000360495 PLCB2Q00722 1185 aa17.49■□□□□ 0.39
CCDC144A-203ENST00000360495 ARID4BQ4LE39 1312 aaPredicted RBP17.49■□□□□ 0.39
CCDC144A-203ENST00000360495 KDM2AQ9Y2K7 1162 aa17.48■□□□□ 0.39
CCDC144A-203ENST00000360495 B4GALNT3Q6L9W6 998 aa17.48■□□□□ 0.39
CCDC144A-203ENST00000360495 RGS3P49796 1198 aa17.48■□□□□ 0.39
CCDC144A-203ENST00000360495 MSNP26038 577 aaKnown RBP17.46■□□□□ 0.39
CCDC144A-203ENST00000360495 CHAF1AQ13111 956 aaPredicted RBP17.43■□□□□ 0.38
CCDC144A-203ENST00000360495 CASC1Q6TDU7 716 aa17.43■□□□□ 0.38
CCDC144A-203ENST00000360495 HSP90AB1P08238 724 aaKnown RBP17.41■□□□□ 0.38
CCDC144A-203ENST00000360495 STAG3Q9UJ98 1225 aa17.37■□□□□ 0.37
CCDC144A-203ENST00000360495 GOLGA6L6A8MZA4 724 aa17.37■□□□□ 0.37
CCDC144A-203ENST00000360495 FTSJ3Q8IY81 847 aaKnown RBP17.37■□□□□ 0.37
CCDC144A-203ENST00000360495 PNNQ9H307 717 aaKnown RBP17.37■□□□□ 0.37
CCDC144A-203ENST00000360495 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.36■□□□□ 0.37
CCDC144A-203ENST00000360495 CCDC180Q9P1Z9 1646 aa17.35■□□□□ 0.37
CCDC144A-203ENST00000360495 NRDCO43847 1150 aa17.33■□□□□ 0.36
CCDC144A-203ENST00000360495 ARID3AQ99856 593 aa17.32■□□□□ 0.36
CCDC144A-203ENST00000360495 HSCBQ8IWL3 235 aa17.32■□□□□ 0.36
CCDC144A-203ENST00000360495 TSHZ2Q9NRE2 1034 aa17.31■□□□□ 0.36
CCDC144A-203ENST00000360495 SPRYD3Q8NCJ5 442 aa17.27■□□□□ 0.35
CCDC144A-203ENST00000360495 FRAT1Q92837 279 aaPredicted RBP17.26■□□□□ 0.35
CCDC144A-203ENST00000360495 MYO15BQ96JP2 1530 aa17.26■□□□□ 0.35
CCDC144A-203ENST00000360495 ESF1Q9H501 851 aaKnown RBP17.25■□□□□ 0.35
CCDC144A-203ENST00000360495 CFAP53Q96M91 514 aa17.24■□□□□ 0.35
CCDC144A-203ENST00000360495 MTUS2Q5JR59 1369 aa17.24■□□□□ 0.35
CCDC144A-203ENST00000360495 RRP7BPQ9NSQ0 103 aa17.23■□□□□ 0.35
CCDC144A-203ENST00000360495 CLIP1P30622 1438 aa17.23■□□□□ 0.35
CCDC144A-203ENST00000360495 ZBTB7CA1YPR0 619 aa17.23■□□□□ 0.35
CCDC144A-203ENST00000360495 TNNT3P45378 269 aaPredicted RBP17.23■□□□□ 0.35
CCDC144A-203ENST00000360495 KNSTRNQ9Y448 316 aa17.23■□□□□ 0.35
CCDC144A-203ENST00000360495 TSPY4P0CV99 314 aa17.22■□□□□ 0.35
CCDC144A-203ENST00000360495 TSPY10P0CW01 314 aa17.22■□□□□ 0.35
CCDC144A-203ENST00000360495 NEUROD2Q15784 382 aa17.22■□□□□ 0.35
CCDC144A-203ENST00000360495 GZF1Q9H116 711 aaPredicted RBP17.21■□□□□ 0.35
CCDC144A-203ENST00000360495 DRC7Q8IY82 874 aa17.21■□□□□ 0.35
CCDC144A-203ENST00000360495 GOLGA6L4A6NEF3 574 aa17.2■□□□□ 0.34
CCDC144A-203ENST00000360495 KIAA2012Q0VF49 1180 aa17.19■□□□□ 0.34
CCDC144A-203ENST00000360495 HSP90AA2PQ14568 343 aaPredicted RBP17.18■□□□□ 0.34
CCDC144A-203ENST00000360495 CCER2I3L3R5 266 aa17.16■□□□□ 0.34
CCDC144A-203ENST00000360495 GOLGA6L3A6NEY3 463 aa17.16■□□□□ 0.34
CCDC144A-203ENST00000360495 VSIG10Q8N0Z9 540 aa17.16■□□□□ 0.34
CCDC144A-203ENST00000360495 IPO9Q96P70 1041 aaKnown RBP17.16■□□□□ 0.34
CCDC144A-203ENST00000360495 GBP4Q96PP9 640 aa17.16■□□□□ 0.34
CCDC144A-203ENST00000360495 MS4A1P11836 297 aa17.15■□□□□ 0.34
CCDC144A-203ENST00000360495 CHMP4BQ9H444 224 aaKnown RBP17.15■□□□□ 0.34
CCDC144A-203ENST00000360495 RSPH6AQ9H0K4 717 aa17.15■□□□□ 0.34
CCDC144A-203ENST00000360495 SLKQ9H2G2 1235 aaPredicted RBP17.14■□□□□ 0.33
CCDC144A-203ENST00000360495 PTMSP20962 102 aa17.14■□□□□ 0.33
CCDC144A-203ENST00000360495 CDCA8Q53HL2 280 aa17.14■□□□□ 0.33
CCDC144A-203ENST00000360495 CARD11Q9BXL7 1154 aa17.14■□□□□ 0.33
CCDC144A-203ENST00000360495 TAOK2Q9UL54 1235 aa17.13■□□□□ 0.33
CCDC144A-203ENST00000360495 FGD1P98174 961 aa17.12■□□□□ 0.33
CCDC144A-203ENST00000360495 SIN3AQ96ST3 1273 aa17.12■□□□□ 0.33
CCDC144A-203ENST00000360495 MAPK8IP3Q9UPT6 1336 aa17.12■□□□□ 0.33
CCDC144A-203ENST00000360495 CEP162Q5TB80 1403 aa17.12■□□□□ 0.33
CCDC144A-203ENST00000360495 TCERG1O14776 1098 aaKnown RBP17.11■□□□□ 0.33
CCDC144A-203ENST00000360495 RGL3Q3MIN7 710 aa17.11■□□□□ 0.33
CCDC144A-203ENST00000360495 TULP1O00294 542 aaPredicted RBP17.09■□□□□ 0.33
CCDC144A-203ENST00000360495 KCNJ4P48050 445 aa17.09■□□□□ 0.33
CCDC144A-203ENST00000360495 CC2D1BQ5T0F9 858 aaKnown RBP17.07■□□□□ 0.32
CCDC144A-203ENST00000360495 NAP1L2Q9ULW6 460 aaPredicted RBP17.06■□□□□ 0.32
CCDC144A-203ENST00000360495 MCCP23508 829 aa17.06■□□□□ 0.32
CCDC144A-203ENST00000360495 PLPPR3Q6T4P5 718 aa17.05■□□□□ 0.32
CCDC144A-203ENST00000360495 NUDCQ9Y266 331 aa17.05■□□□□ 0.32
CCDC144A-203ENST00000360495 OS9Q13438 667 aaPredicted RBP17.02■□□□□ 0.32
CCDC144A-203ENST00000360495 CFAP44Q96MT7 982 aa17.01■□□□□ 0.31
CCDC144A-203ENST00000360495 USP35Q9P2H5 1018 aa17.01■□□□□ 0.31
CCDC144A-203ENST00000360495 SENP3Q9H4L4 574 aaPredicted RBP17.01■□□□□ 0.31
CCDC144A-203ENST00000360495 SYAP1Q96A49 352 aaPredicted RBP17■□□□□ 0.31
CCDC144A-203ENST00000360495 GOLGA3Q08378 1498 aa17■□□□□ 0.31
CCDC144A-203ENST00000360495 A0A0G2JS52 829 aa17■□□□□ 0.31
CCDC144A-203ENST00000360495 SCRIBQ14160 1630 aa16.99■□□□□ 0.31
CCDC144A-203ENST00000360495 C14orf37Q86TY3 774 aa16.99■□□□□ 0.31
CCDC144A-203ENST00000360495 ZCCHC6Q5VYS8 1495 aaKnown RBP16.98■□□□□ 0.31
CCDC144A-203ENST00000360495 RCAN3Q9UKA8 241 aa16.98■□□□□ 0.31
CCDC144A-203ENST00000360495 RSF1Q96T23 1441 aaPredicted RBP16.97■□□□□ 0.31
CCDC144A-203ENST00000360495 PLEKHG5O94827 1062 aa16.96■□□□□ 0.31
CCDC144A-203ENST00000360495 GSE1Q14687 1217 aa16.95■□□□□ 0.3
CCDC144A-203ENST00000360495 U2SURPO15042 1029 aaKnown RBP16.94■□□□□ 0.3
CCDC144A-203ENST00000360495 CALD1Q05682 793 aaKnown RBP16.94■□□□□ 0.3
CCDC144A-203ENST00000360495 GOLGA6L1Q8N7Z2 621 aa16.94■□□□□ 0.3
CCDC144A-203ENST00000360495 MFAP1P55081 439 aaKnown RBP16.91■□□□□ 0.3
CCDC144A-203ENST00000360495 EEA1Q15075 1411 aa16.91■□□□□ 0.3
CCDC144A-203ENST00000360495 TIMELESSQ9UNS1 1208 aa16.91■□□□□ 0.3
CCDC144A-203ENST00000360495 RWDD1Q9H446 243 aaPredicted RBP16.9■□□□□ 0.3
CCDC144A-203ENST00000360495 PPP1R15AO75807 674 aaPredicted RBP16.89■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms