RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 TMC1Q8TDI8 760 aa6.55□□□□□ -1.36
SCN3A-202ENST00000360093 GTF3C3Q9Y5Q9 886 aa6.55□□□□□ -1.36
SCN3A-202ENST00000360093 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.55□□□□□ -1.36
SCN3A-202ENST00000360093 KCNH8Q96L42 1107 aa6.54□□□□□ -1.36
SCN3A-202ENST00000360093 WIZO95785 1651 aa6.54□□□□□ -1.36
SCN3A-202ENST00000360093 SMARCA4P51532 1647 aa6.54□□□□□ -1.36
SCN3A-202ENST00000360093 WDR43Q15061 677 aaKnown RBP eCLIP6.54□□□□□ -1.36
SCN3A-202ENST00000360093 CARMIL2Q6F5E8 1435 aa6.54□□□□□ -1.36
SCN3A-202ENST00000360093 ABCC8Q09428 1581 aa6.53□□□□□ -1.36
SCN3A-202ENST00000360093 DDX10Q13206 875 aaKnown RBP6.53□□□□□ -1.36
SCN3A-202ENST00000360093 EIF4G1Q04637 1599 aaKnown RBP6.52□□□□□ -1.37
SCN3A-202ENST00000360093 RRP7BPQ9NSQ0 103 aa6.52□□□□□ -1.37
SCN3A-202ENST00000360093 CCNB3Q8WWL7 1395 aa6.52□□□□□ -1.37
SCN3A-202ENST00000360093 ANP32AP39687 249 aaKnown RBP6.52□□□□□ -1.37
SCN3A-202ENST00000360093 KDM2AQ9Y2K7 1162 aa6.52□□□□□ -1.37
SCN3A-202ENST00000360093 SOGA1O94964 1423 aa6.51□□□□□ -1.37
SCN3A-202ENST00000360093 HNRNPUQ00839 825 aaKnown RBP eCLIP6.51□□□□□ -1.37
SCN3A-202ENST00000360093 PPP1R15AO75807 674 aaPredicted RBP6.51□□□□□ -1.37
SCN3A-202ENST00000360093 FMN1Q68DA7 1419 aa6.51□□□□□ -1.37
SCN3A-202ENST00000360093 UPF2Q9HAU5 1272 aaKnown RBP6.51□□□□□ -1.37
SCN3A-202ENST00000360093 TIMELESSQ9UNS1 1208 aa6.5□□□□□ -1.37
SCN3A-202ENST00000360093 CADPSQ9ULU8 1353 aa6.5□□□□□ -1.37
SCN3A-202ENST00000360093 KANK1Q14678 1352 aa6.5□□□□□ -1.37
SCN3A-202ENST00000360093 FAM9BQ8IZU0 186 aa6.49□□□□□ -1.37
SCN3A-202ENST00000360093 VPS8Q8N3P4 1428 aa6.49□□□□□ -1.37
SCN3A-202ENST00000360093 ARHGAP35Q9NRY4 1499 aa6.49□□□□□ -1.37
SCN3A-202ENST00000360093 ATAD2BQ9ULI0 1458 aa6.48□□□□□ -1.37
SCN3A-202ENST00000360093 PLPPR3Q6T4P5 718 aa6.48□□□□□ -1.37
SCN3A-202ENST00000360093 HDGFP51858 240 aaKnown RBP6.48□□□□□ -1.37
SCN3A-202ENST00000360093 MRS2Q9HD23 443 aa6.48□□□□□ -1.37
SCN3A-202ENST00000360093 ARID4BQ4LE39 1312 aaPredicted RBP6.47□□□□□ -1.37
SCN3A-202ENST00000360093 CFAP53Q96M91 514 aa6.47□□□□□ -1.37
SCN3A-202ENST00000360093 KNSTRNQ9Y448 316 aa6.45□□□□□ -1.38
SCN3A-202ENST00000360093 RAPGEF2Q9Y4G8 1499 aa6.45□□□□□ -1.38
SCN3A-202ENST00000360093 FKBP8Q14318 412 aa6.44□□□□□ -1.38
SCN3A-202ENST00000360093 CARD11Q9BXL7 1154 aa6.44□□□□□ -1.38
SCN3A-202ENST00000360093 MYH16Q9H6N6 1097 aa6.44□□□□□ -1.38
SCN3A-202ENST00000360093 EIF5BO60841 1220 aaKnown RBP6.44□□□□□ -1.38
SCN3A-202ENST00000360093 RSPH4AQ5TD94 716 aa6.44□□□□□ -1.38
SCN3A-202ENST00000360093 HSP90AA1P07900 732 aaKnown RBP6.43□□□□□ -1.38
SCN3A-202ENST00000360093 RGL3Q3MIN7 710 aa6.43□□□□□ -1.38
SCN3A-202ENST00000360093 NPM2Q86SE8 214 aaKnown RBP6.43□□□□□ -1.38
SCN3A-202ENST00000360093 PNNQ9H307 717 aaKnown RBP6.43□□□□□ -1.38
SCN3A-202ENST00000360093 SETD5Q9C0A6 1442 aa6.43□□□□□ -1.38
SCN3A-202ENST00000360093 C14orf37Q86TY3 774 aa6.43□□□□□ -1.38
SCN3A-202ENST00000360093 CCDC136Q96JN2 1154 aa6.43□□□□□ -1.38
SCN3A-202ENST00000360093 CCDC18Q5T9S5 1454 aa6.42□□□□□ -1.38
SCN3A-202ENST00000360093 ANP32BQ92688 251 aaKnown RBP6.42□□□□□ -1.38
SCN3A-202ENST00000360093 BCL11AQ9H165 835 aa6.42□□□□□ -1.38
SCN3A-202ENST00000360093 FANCD2Q9BXW9 1451 aa6.42□□□□□ -1.38
SCN3A-202ENST00000360093 NUDCQ9Y266 331 aa6.41□□□□□ -1.38
SCN3A-202ENST00000360093 TDRD9Q8NDG6 1382 aaKnown RBP6.41□□□□□ -1.38
SCN3A-202ENST00000360093 EFCAB2Q5VUJ9 269 aa6.41□□□□□ -1.38
SCN3A-202ENST00000360093 POGKQ9P215 609 aa6.4□□□□□ -1.38
SCN3A-202ENST00000360093 SCAF1Q9H7N4 1312 aaKnown RBP6.4□□□□□ -1.38
SCN3A-202ENST00000360093 SALL2Q9Y467 1007 aaPredicted RBP6.4□□□□□ -1.38
SCN3A-202ENST00000360093 ANKRD30AQ9BXX3 1397 aa6.4□□□□□ -1.39
SCN3A-202ENST00000360093 TMF1P82094 1093 aa6.4□□□□□ -1.39
SCN3A-202ENST00000360093 CHMP4BQ9H444 224 aaKnown RBP6.4□□□□□ -1.39
SCN3A-202ENST00000360093 MIER1Q8N108 512 aa6.38□□□□□ -1.39
SCN3A-202ENST00000360093 MS4A1P11836 297 aa6.37□□□□□ -1.39
SCN3A-202ENST00000360093 NCAPD3P42695 1498 aa6.37□□□□□ -1.39
SCN3A-202ENST00000360093 HAP1P54257 671 aaPredicted RBP6.37□□□□□ -1.39
SCN3A-202ENST00000360093 MAPK8IP3Q9UPT6 1336 aa6.37□□□□□ -1.39
SCN3A-202ENST00000360093 DCAF11Q8TEB1 546 aa6.37□□□□□ -1.39
SCN3A-202ENST00000360093 JPH4Q96JJ6 628 aa6.35□□□□□ -1.39
SCN3A-202ENST00000360093 HIRIP3Q9BW71 556 aaPredicted RBP6.35□□□□□ -1.39
SCN3A-202ENST00000360093 EIF3AQ14152 1382 aaKnown RBP6.35□□□□□ -1.39
SCN3A-202ENST00000360093 TRHP20396 242 aaPredicted RBP6.35□□□□□ -1.39
SCN3A-202ENST00000360093 GAPVD1Q14C86 1478 aa6.34□□□□□ -1.39
SCN3A-202ENST00000360093 DDRGK1Q96HY6 314 aa6.34□□□□□ -1.39
SCN3A-202ENST00000360093 BECN1Q14457 450 aa6.34□□□□□ -1.39
SCN3A-202ENST00000360093 SIN3AQ96ST3 1273 aa6.34□□□□□ -1.39
SCN3A-202ENST00000360093 CASC1Q6TDU7 716 aa6.34□□□□□ -1.4
SCN3A-202ENST00000360093 NUP155O75694 1391 aa6.33□□□□□ -1.4
SCN3A-202ENST00000360093 ZBTB7CA1YPR0 619 aa6.33□□□□□ -1.4
SCN3A-202ENST00000360093 FTSJ3Q8IY81 847 aaKnown RBP6.33□□□□□ -1.4
SCN3A-202ENST00000360093 PKD2Q13563 968 aa6.33□□□□□ -1.4
SCN3A-202ENST00000360093 CCER2I3L3R5 266 aa6.33□□□□□ -1.4
SCN3A-202ENST00000360093 MPHOSPH9Q99550 1183 aa6.33□□□□□ -1.4
SCN3A-202ENST00000360093 ANP32EQ9BTT0 268 aa6.33□□□□□ -1.4
SCN3A-202ENST00000360093 FGD5Q6ZNL6 1462 aa6.33□□□□□ -1.4
SCN3A-202ENST00000360093 RAB3GAP2Q9H2M9 1393 aa6.32□□□□□ -1.4
SCN3A-202ENST00000360093 PPM1GO15355 546 aaPredicted RBP6.32□□□□□ -1.4
SCN3A-202ENST00000360093 FHOD3Q2V2M9 1422 aa6.32□□□□□ -1.4
SCN3A-202ENST00000360093 GGT6Q6P531 493 aa6.32□□□□□ -1.4
SCN3A-202ENST00000360093 SPAG9O60271 1321 aaKnown RBP6.32□□□□□ -1.4
SCN3A-202ENST00000360093 KANK4Q5T7N3 995 aaPredicted RBP6.32□□□□□ -1.4
SCN3A-202ENST00000360093 CUX1P39880 1505 aa6.32□□□□□ -1.4
SCN3A-202ENST00000360093 UACAQ9BZF9 1416 aa6.31□□□□□ -1.4
SCN3A-202ENST00000360093 HMGXB3Q12766 1538 aa6.31□□□□□ -1.4
SCN3A-202ENST00000360093 CHMP4AQ9BY43 222 aa6.31□□□□□ -1.4
SCN3A-202ENST00000360093 SRPK2P78362 688 aaKnown RBP6.31□□□□□ -1.4
SCN3A-202ENST00000360093 HDGFL2Q7Z4V5 671 aaPredicted RBP6.31□□□□□ -1.4
SCN3A-202ENST00000360093 ROCK2O75116 1388 aaKnown RBP6.31□□□□□ -1.4
SCN3A-202ENST00000360093 PTPRGP23470 1445 aa6.31□□□□□ -1.4
SCN3A-202ENST00000360093 KTN1Q86UP2 1357 aaKnown RBP6.3□□□□□ -1.4
SCN3A-202ENST00000360093 CFAP44Q96MT7 982 aa6.3□□□□□ -1.4
SCN3A-202ENST00000360093 A0A0G2JS52 829 aa6.3□□□□□ -1.4
SCN3A-202ENST00000360093 CALD1Q05682 793 aaKnown RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms