RNA–Protein interactions for RNA: ENST00000357641.10

BRPF3-202, Transcript of bromodomain and PHD finger containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRPF3, Length 6,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-202ENST00000357641 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.26■■□□□ 1.64
BRPF3-202ENST00000357641 TPRNQ4KMQ1 711 aa25.25■■□□□ 1.63
BRPF3-202ENST00000357641 MYH16Q9H6N6 1097 aa25.25■■□□□ 1.63
BRPF3-202ENST00000357641 SENP3-EIF4A1A0A087X0R7 540 aa25.24■■□□□ 1.63
BRPF3-202ENST00000357641 ARID4BQ4LE39 1312 aaPredicted RBP25.21■■□□□ 1.63
BRPF3-202ENST00000357641 PPP4R2Q9NY27 417 aa25.21■■□□□ 1.63
BRPF3-202ENST00000357641 RBM19Q9Y4C8 960 aaKnown RBP25.14■■□□□ 1.62
BRPF3-202ENST00000357641 PLCB2Q00722 1185 aa25.11■■□□□ 1.61
BRPF3-202ENST00000357641 CHGAP10645 457 aaKnown RBP25.1■■□□□ 1.61
BRPF3-202ENST00000357641 FBLN2P98095 1184 aa25.1■■□□□ 1.61
BRPF3-202ENST00000357641 CHIC2Q9UKJ5 165 aa25.08■■□□□ 1.61
BRPF3-202ENST00000357641 B4GALNT3Q6L9W6 998 aa25.08■■□□□ 1.6
BRPF3-202ENST00000357641 KDM2AQ9Y2K7 1162 aa25.06■■□□□ 1.6
BRPF3-202ENST00000357641 EIF4G2P78344 907 aaKnown RBP eCLIP25.06■■□□□ 1.6
BRPF3-202ENST00000357641 RGS3P49796 1198 aa25.06■■□□□ 1.6
BRPF3-202ENST00000357641 ZRSR1Q15695 479 aaKnown RBP25.05■■□□□ 1.6
BRPF3-202ENST00000357641 L1TD1Q5T7N2 865 aaKnown RBP25.04■■□□□ 1.6
BRPF3-202ENST00000357641 MSNP26038 577 aaKnown RBP25.02■■□□□ 1.6
BRPF3-202ENST00000357641 ARID3AQ99856 593 aa24.98■■□□□ 1.59
BRPF3-202ENST00000357641 HSP90AB1P08238 724 aaKnown RBP24.95■■□□□ 1.58
BRPF3-202ENST00000357641 CHAF1AQ13111 956 aaPredicted RBP24.93■■□□□ 1.58
BRPF3-202ENST00000357641 PABPN1Q86U42 306 aaKnown RBP eCLIP24.93■■□□□ 1.58
BRPF3-202ENST00000357641 CASC1Q6TDU7 716 aa24.93■■□□□ 1.58
BRPF3-202ENST00000357641 ZBTB7CA1YPR0 619 aa24.88■■□□□ 1.57
BRPF3-202ENST00000357641 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.88■■□□□ 1.577e-7■□□□□ 9.8
BRPF3-202ENST00000357641 SPRYD3Q8NCJ5 442 aa24.86■■□□□ 1.57
BRPF3-202ENST00000357641 FTSJ3Q8IY81 847 aaKnown RBP24.86■■□□□ 1.57
BRPF3-202ENST00000357641 GOLGA6L6A8MZA4 724 aa24.85■■□□□ 1.57
BRPF3-202ENST00000357641 CCDC180Q9P1Z9 1646 aa24.85■■□□□ 1.57
BRPF3-202ENST00000357641 STAG3Q9UJ98 1225 aa24.84■■□□□ 1.57
BRPF3-202ENST00000357641 PNNQ9H307 717 aaKnown RBP24.84■■□□□ 1.57
BRPF3-202ENST00000357641 TSHZ2Q9NRE2 1034 aa24.84■■□□□ 1.57
BRPF3-202ENST00000357641 MYO15BQ96JP2 1530 aa24.79■■□□□ 1.56
BRPF3-202ENST00000357641 HSCBQ8IWL3 235 aa24.79■■□□□ 1.56
BRPF3-202ENST00000357641 FRAT1Q92837 279 aaPredicted RBP24.74■■□□□ 1.55
BRPF3-202ENST00000357641 GZF1Q9H116 711 aaPredicted RBP24.73■■□□□ 1.55
BRPF3-202ENST00000357641 NRDCO43847 1150 aa24.72■■□□□ 1.55
BRPF3-202ENST00000357641 TNNT3P45378 269 aaPredicted RBP24.71■■□□□ 1.55
BRPF3-202ENST00000357641 DRC7Q8IY82 874 aa24.7■■□□□ 1.54
BRPF3-202ENST00000357641 NEUROD2Q15784 382 aa24.69■■□□□ 1.54
BRPF3-202ENST00000357641 RRP7BPQ9NSQ0 103 aa24.68■■□□□ 1.54
BRPF3-202ENST00000357641 TAOK2Q9UL54 1235 aa24.68■■□□□ 1.54
BRPF3-202ENST00000357641 VSIG10Q8N0Z9 540 aa24.65■■□□□ 1.54
BRPF3-202ENST00000357641 HSP90AA2PQ14568 343 aaPredicted RBP24.64■■□□□ 1.53
BRPF3-202ENST00000357641 TULP1O00294 542 aaPredicted RBP24.62■■□□□ 1.53
BRPF3-202ENST00000357641 ESF1Q9H501 851 aaKnown RBP24.62■■□□□ 1.53
BRPF3-202ENST00000357641 KNSTRNQ9Y448 316 aa24.61■■□□□ 1.53
BRPF3-202ENST00000357641 CFAP53Q96M91 514 aa24.6■■□□□ 1.53
BRPF3-202ENST00000357641 GOLGA6L4A6NEF3 574 aa24.6■■□□□ 1.53
BRPF3-202ENST00000357641 SLKQ9H2G2 1235 aaPredicted RBP24.59■■□□□ 1.53
BRPF3-202ENST00000357641 GOLGA6L3A6NEY3 463 aa24.58■■□□□ 1.53
BRPF3-202ENST00000357641 MTUS2Q5JR59 1369 aa24.58■■□□□ 1.53
BRPF3-202ENST00000357641 KIAA2012Q0VF49 1180 aa24.58■■□□□ 1.53
BRPF3-202ENST00000357641 CLIP1P30622 1438 aa24.58■■□□□ 1.52
BRPF3-202ENST00000357641 IPO9Q96P70 1041 aaKnown RBP24.56■■□□□ 1.52
BRPF3-202ENST00000357641 RSPH6AQ9H0K4 717 aa24.56■■□□□ 1.52
BRPF3-202ENST00000357641 PLPPR3Q6T4P5 718 aa24.54■■□□□ 1.52
BRPF3-202ENST00000357641 SIN3AQ96ST3 1273 aa24.54■■□□□ 1.52
BRPF3-202ENST00000357641 TSPY4P0CV99 314 aa24.53■■□□□ 1.52
BRPF3-202ENST00000357641 TSPY10P0CW01 314 aa24.53■■□□□ 1.52
BRPF3-202ENST00000357641 SENP3Q9H4L4 574 aaPredicted RBP24.53■■□□□ 1.52
BRPF3-202ENST00000357641 GBP4Q96PP9 640 aa24.52■■□□□ 1.52
BRPF3-202ENST00000357641 CARD11Q9BXL7 1154 aa24.5■■□□□ 1.51
BRPF3-202ENST00000357641 FGD1P98174 961 aa24.5■■□□□ 1.51
BRPF3-202ENST00000357641 RGL3Q3MIN7 710 aa24.5■■□□□ 1.51
BRPF3-202ENST00000357641 CC2D1BQ5T0F9 858 aaKnown RBP24.49■■□□□ 1.51
BRPF3-202ENST00000357641 NAP1L2Q9ULW6 460 aaPredicted RBP24.49■■□□□ 1.51
BRPF3-202ENST00000357641 CCER2I3L3R5 266 aa24.48■■□□□ 1.51
BRPF3-202ENST00000357641 PTMSP20962 102 aa24.47■■□□□ 1.51
BRPF3-202ENST00000357641 KCNJ4P48050 445 aa24.46■■□□□ 1.51
BRPF3-202ENST00000357641 MAPK8IP3Q9UPT6 1336 aa24.46■■□□□ 1.51
BRPF3-202ENST00000357641 CEP162Q5TB80 1403 aa24.45■■□□□ 1.5
BRPF3-202ENST00000357641 TCERG1O14776 1098 aaKnown RBP24.44■■□□□ 1.5
BRPF3-202ENST00000357641 MS4A1P11836 297 aa24.44■■□□□ 1.5
BRPF3-202ENST00000357641 CHMP4BQ9H444 224 aaKnown RBP24.42■■□□□ 1.5
BRPF3-202ENST00000357641 PLEKHG5O94827 1062 aa24.42■■□□□ 1.5
BRPF3-202ENST00000357641 A0A0G2JS52 829 aa24.4■■□□□ 1.5
BRPF3-202ENST00000357641 CDCA8Q53HL2 280 aa24.4■■□□□ 1.5
BRPF3-202ENST00000357641 ABCC9O60706 1549 aa24.4■■□□□ 1.5
BRPF3-202ENST00000357641 MCCP23508 829 aa24.38■■□□□ 1.49
BRPF3-202ENST00000357641 OS9Q13438 667 aaPredicted RBP24.38■■□□□ 1.49
BRPF3-202ENST00000357641 TIMELESSQ9UNS1 1208 aa24.36■■□□□ 1.49
BRPF3-202ENST00000357641 C14orf37Q86TY3 774 aa24.35■■□□□ 1.49
BRPF3-202ENST00000357641 NUDCQ9Y266 331 aa24.32■■□□□ 1.48
BRPF3-202ENST00000357641 SYAP1Q96A49 352 aaPredicted RBP24.29■■□□□ 1.48
BRPF3-202ENST00000357641 GSE1Q14687 1217 aa24.28■■□□□ 1.48
BRPF3-202ENST00000357641 RCAN3Q9UKA8 241 aa24.28■■□□□ 1.48
BRPF3-202ENST00000357641 USP35Q9P2H5 1018 aa24.27■■□□□ 1.48
BRPF3-202ENST00000357641 ZCCHC6Q5VYS8 1495 aaKnown RBP24.27■■□□□ 1.48
BRPF3-202ENST00000357641 U2SURPO15042 1029 aaKnown RBP24.26■■□□□ 1.47
BRPF3-202ENST00000357641 MFAP1P55081 439 aaKnown RBP24.25■■□□□ 1.47
BRPF3-202ENST00000357641 GOLGA6L1Q8N7Z2 621 aa24.25■■□□□ 1.47
BRPF3-202ENST00000357641 GOLGA3Q08378 1498 aa24.24■■□□□ 1.47
BRPF3-202ENST00000357641 CALD1Q05682 793 aaKnown RBP24.23■■□□□ 1.47
BRPF3-202ENST00000357641 FOXD4L1Q9NU39 408 aa24.23■■□□□ 1.47
BRPF3-202ENST00000357641 CFAP44Q96MT7 982 aa24.22■■□□□ 1.47
BRPF3-202ENST00000357641 NOC3LQ8WTT2 800 aaKnown RBP24.22■■□□□ 1.47
BRPF3-202ENST00000357641 APBB1O00213 710 aa24.2■■□□□ 1.46
BRPF3-202ENST00000357641 ZNF771Q7L3S4 317 aaPredicted RBP24.18■■□□□ 1.46
BRPF3-202ENST00000357641 RSF1Q96T23 1441 aaPredicted RBP24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms