RNA–Protein interactions for RNA: ENST00000357517.6

PCDH1-202, Transcript of protocadherin 1, humanhuman

TSL 2

Gene PCDH1, Length 3,307 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-202ENST00000357517 BAZ1BQ9UIG0 1483 aaKnown RBP14.34□□□□□ -0.11
PCDH1-202ENST00000357517 CNGB1Q14028 1251 aaPredicted RBP14.33□□□□□ -0.12
PCDH1-202ENST00000357517 A0A0U1RQG5 324 aaPredicted RBP14.32□□□□□ -0.12
PCDH1-202ENST00000357517 GLIPR1L2Q4G1C9 344 aa14.3□□□□□ -0.12
PCDH1-202ENST00000357517 FAM9BQ8IZU0 186 aa14.25□□□□□ -0.13
PCDH1-202ENST00000357517 CECR2Q9BXF3 1484 aa14.24□□□□□ -0.13
PCDH1-202ENST00000357517 ARXQ96QS3 562 aa14.22□□□□□ -0.13
PCDH1-202ENST00000357517 PPP1R15AO75807 674 aaPredicted RBP14.21□□□□□ -0.13
PCDH1-202ENST00000357517 ARID4BQ4LE39 1312 aaPredicted RBP14.21□□□□□ -0.13
PCDH1-202ENST00000357517 CCER2I3L3R5 266 aa14.21□□□□□ -0.13
PCDH1-202ENST00000357517 SOGA1O94964 1423 aa14.2□□□□□ -0.14
PCDH1-202ENST00000357517 TNIKQ9UKE5 1360 aa14.2□□□□□ -0.14
PCDH1-202ENST00000357517 RSPH6AQ9H0K4 717 aa14.19□□□□□ -0.14
PCDH1-202ENST00000357517 GSE1Q14687 1217 aa14.19□□□□□ -0.14
PCDH1-202ENST00000357517 WASHC2AQ641Q2 1341 aa14.19□□□□□ -0.14
PCDH1-202ENST00000357517 SLC4A3P48751 1232 aa14.18□□□□□ -0.14
PCDH1-202ENST00000357517 FRAT1Q92837 279 aaPredicted RBP14.18□□□□□ -0.14
PCDH1-202ENST00000357517 MROH2BQ7Z745 1585 aa14.17□□□□□ -0.14
PCDH1-202ENST00000357517 C11orf95C9JLR9 678 aaPredicted RBP14.17□□□□□ -0.14
PCDH1-202ENST00000357517 NAP1L5Q96NT1 182 aaPredicted RBP14.13□□□□□ -0.15
PCDH1-202ENST00000357517 ABCC8Q09428 1581 aa14.13□□□□□ -0.15
PCDH1-202ENST00000357517 CCDC88BA6NC98 1476 aa14.12□□□□□ -0.15
PCDH1-202ENST00000357517 WIZO95785 1651 aa14.12□□□□□ -0.15
PCDH1-202ENST00000357517 WASHC2CQ9Y4E1 1318 aa14.11□□□□□ -0.15
PCDH1-202ENST00000357517 CCDC184Q52MB2 194 aa14.11□□□□□ -0.15
PCDH1-202ENST00000357517 PDE4CQ08493 712 aa14.1□□□□□ -0.15
PCDH1-202ENST00000357517 RUSC2Q8N2Y8 1516 aa14.09□□□□□ -0.15
PCDH1-202ENST00000357517 HSP90AA2PQ14568 343 aaPredicted RBP14.09□□□□□ -0.15
PCDH1-202ENST00000357517 PPM1GO15355 546 aaPredicted RBP14.08□□□□□ -0.15
PCDH1-202ENST00000357517 USP35Q9P2H5 1018 aa14.08□□□□□ -0.16
PCDH1-202ENST00000357517 AEBP2Q6ZN18 517 aaPredicted RBP14.07□□□□□ -0.16
PCDH1-202ENST00000357517 KANK4Q5T7N3 995 aaPredicted RBP14.07□□□□□ -0.16
PCDH1-202ENST00000357517 NACADO15069 1562 aa14.07□□□□□ -0.16
PCDH1-202ENST00000357517 NFKBIBQ15653 356 aa14.06□□□□□ -0.16
PCDH1-202ENST00000357517 DCAF11Q8TEB1 546 aa14.06□□□□□ -0.16
PCDH1-202ENST00000357517 CLIP1P30622 1438 aa14.04□□□□□ -0.16
PCDH1-202ENST00000357517 MRS2Q9HD23 443 aa14.03□□□□□ -0.16
PCDH1-202ENST00000357517 SKAP1Q86WV1 359 aa14.02□□□□□ -0.16
PCDH1-202ENST00000357517 RBM10P98175 930 aaKnown RBP14.02□□□□□ -0.17
PCDH1-202ENST00000357517 WDR97A6NE52 1622 aa14□□□□□ -0.17
PCDH1-202ENST00000357517 FAM43AQ8N2R8 423 aa14□□□□□ -0.17
PCDH1-202ENST00000357517 PDE4AP27815 886 aa13.99□□□□□ -0.17
PCDH1-202ENST00000357517 HSP90AA1P07900 732 aaKnown RBP13.98□□□□□ -0.17
PCDH1-202ENST00000357517 FGD1P98174 961 aa13.98□□□□□ -0.17
PCDH1-202ENST00000357517 AKNAQ7Z591 1439 aa13.98□□□□□ -0.17
PCDH1-202ENST00000357517 RRAGDQ9NQL2 400 aaPredicted RBP13.98□□□□□ -0.17
PCDH1-202ENST00000357517 FRAT2O75474 233 aaPredicted RBP13.97□□□□□ -0.17
PCDH1-202ENST00000357517 PDIA4P13667 645 aaKnown RBP13.96□□□□□ -0.17
PCDH1-202ENST00000357517 BCL11BQ9C0K0 894 aaPredicted RBP13.96□□□□□ -0.17
PCDH1-202ENST00000357517 FAM50AQ14320 339 aaKnown RBP13.95□□□□□ -0.18
PCDH1-202ENST00000357517 RAB3GAP2Q9H2M9 1393 aa13.94□□□□□ -0.18
PCDH1-202ENST00000357517 BAZ1AQ9NRL2 1556 aaPredicted RBP13.93□□□□□ -0.18
PCDH1-202ENST00000357517 GOLGA3Q08378 1498 aa13.93□□□□□ -0.18
PCDH1-202ENST00000357517 AAMPQ13685 434 aa13.93□□□□□ -0.18
PCDH1-202ENST00000357517 POLR3GLQ9BT43 218 aa13.93□□□□□ -0.18
PCDH1-202ENST00000357517 VPS8Q8N3P4 1428 aa13.92□□□□□ -0.18
PCDH1-202ENST00000357517 PNNQ9H307 717 aaKnown RBP13.92□□□□□ -0.18
PCDH1-202ENST00000357517 ARID3AQ99856 593 aa13.91□□□□□ -0.18
PCDH1-202ENST00000357517 EEA1Q15075 1411 aa13.9□□□□□ -0.18
PCDH1-202ENST00000357517 EIF4G1Q04637 1599 aaKnown RBP13.88□□□□□ -0.19
PCDH1-202ENST00000357517 RGS3P49796 1198 aa13.87□□□□□ -0.19
PCDH1-202ENST00000357517 EXOC6Q8TAG9 804 aa13.86□□□□□ -0.19
PCDH1-202ENST00000357517 BACH2Q9BYV9 841 aa13.85□□□□□ -0.19
PCDH1-202ENST00000357517 POGKQ9P215 609 aa13.85□□□□□ -0.19
PCDH1-202ENST00000357517 ATP1B4Q9UN42 357 aaPredicted RBP13.84□□□□□ -0.19
PCDH1-202ENST00000357517 TONSLQ96HA7 1378 aa13.84□□□□□ -0.19
PCDH1-202ENST00000357517 RRP9O43818 475 aaKnown RBP13.84□□□□□ -0.19
PCDH1-202ENST00000357517 ZBED9Q6R2W3 1325 aa13.83□□□□□ -0.19
PCDH1-202ENST00000357517 DDRGK1Q96HY6 314 aa13.83□□□□□ -0.2
PCDH1-202ENST00000357517 TCERG1O14776 1098 aaKnown RBP13.82□□□□□ -0.2
PCDH1-202ENST00000357517 GZF1Q9H116 711 aaPredicted RBP13.82□□□□□ -0.2
PCDH1-202ENST00000357517 CCNB3Q8WWL7 1395 aa13.81□□□□□ -0.2
PCDH1-202ENST00000357517 TOP2AP11388 1531 aaKnown RBP13.8□□□□□ -0.2
PCDH1-202ENST00000357517 NUDCQ9Y266 331 aa13.79□□□□□ -0.2
PCDH1-202ENST00000357517 MAPKBP1O60336 1514 aa13.78□□□□□ -0.2
PCDH1-202ENST00000357517 HSPA5P11021 654 aaKnown RBP13.77□□□□□ -0.2
PCDH1-202ENST00000357517 SLKQ9H2G2 1235 aaPredicted RBP13.77□□□□□ -0.2
PCDH1-202ENST00000357517 PRKRIP1Q9H875 184 aaPredicted RBP13.77□□□□□ -0.2
PCDH1-202ENST00000357517 SMARCA2P51531 1590 aa13.76□□□□□ -0.21
PCDH1-202ENST00000357517 PANK2Q9BZ23 570 aa13.74□□□□□ -0.21
PCDH1-202ENST00000357517 PLIN1O60240 522 aa13.74□□□□□ -0.21
PCDH1-202ENST00000357517 PABPN1Q86U42 306 aaKnown RBP eCLIP13.73□□□□□ -0.21
PCDH1-202ENST00000357517 AMER1Q5JTC6 1135 aaPredicted RBP13.72□□□□□ -0.21
PCDH1-202ENST00000357517 SPRYD3Q8NCJ5 442 aa13.7□□□□□ -0.22
PCDH1-202ENST00000357517 SETD5Q9C0A6 1442 aa13.7□□□□□ -0.22
PCDH1-202ENST00000357517 SMARCA4P51532 1647 aa13.7□□□□□ -0.22
PCDH1-202ENST00000357517 KLHL34Q8N239 644 aa13.7□□□□□ -0.22
PCDH1-202ENST00000357517 CEP164Q9UPV0 1460 aa13.69□□□□□ -0.22
PCDH1-202ENST00000357517 ZHX1Q9UKY1 873 aaPredicted RBP13.69□□□□□ -0.22
PCDH1-202ENST00000357517 RAPGEF2Q9Y4G8 1499 aa13.68□□□□□ -0.22
PCDH1-202ENST00000357517 KIF21BO75037 1637 aa13.66□□□□□ -0.22
PCDH1-202ENST00000357517 L1TD1Q5T7N2 865 aaKnown RBP13.66□□□□□ -0.22
PCDH1-202ENST00000357517 PRDM10Q9NQV6 1147 aa13.66□□□□□ -0.22
PCDH1-202ENST00000357517 EIF4G2P78344 907 aaKnown RBP eCLIP13.66□□□□□ -0.22
PCDH1-202ENST00000357517 XRCC6P12956 609 aaKnown RBP eCLIP13.65□□□□□ -0.22
PCDH1-202ENST00000357517 RRP1P56182 461 aaKnown RBP13.65□□□□□ -0.22
PCDH1-202ENST00000357517 PAXIP1Q6ZW49 1069 aaPredicted RBP13.65□□□□□ -0.22
PCDH1-202ENST00000357517 GOLGA6L3A6NEY3 463 aa13.64□□□□□ -0.23
PCDH1-202ENST00000357517 CLCN1P35523 988 aa13.64□□□□□ -0.23
PCDH1-202ENST00000357517 FAM13BQ9NYF5 915 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms