RNA–Protein interactions for RNA: ENST00000357227.8

CDK16-202, Transcript of cyclin dependent kinase 16, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK16, Length 3,144 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK16-202ENST00000357227 BRPF3Q9ULD4 1205 aa21.84■■□□□ 1.09
CDK16-202ENST00000357227 ANP32AP39687 249 aaKnown RBP21.82■■□□□ 1.08
CDK16-202ENST00000357227 CCER2I3L3R5 266 aa21.8■■□□□ 1.08
CDK16-202ENST00000357227 IPO9Q96P70 1041 aaKnown RBP21.8■■□□□ 1.08
CDK16-202ENST00000357227 PPP1R15AO75807 674 aaPredicted RBP21.78■■□□□ 1.08
CDK16-202ENST00000357227 LAS1LQ9Y4W2 734 aaKnown RBP21.78■■□□□ 1.08
CDK16-202ENST00000357227 TOP2AP11388 1531 aaKnown RBP21.76■■□□□ 1.07
CDK16-202ENST00000357227 NEFMP07197 916 aa21.74■■□□□ 1.07
CDK16-202ENST00000357227 WASHC2AQ641Q2 1341 aa21.72■■□□□ 1.07
CDK16-202ENST00000357227 SMARCA2P51531 1590 aa21.7■■□□□ 1.06
CDK16-202ENST00000357227 EIF4G1Q04637 1599 aaKnown RBP21.7■■□□□ 1.06
CDK16-202ENST00000357227 SMARCA4P51532 1647 aa21.69■■□□□ 1.06
CDK16-202ENST00000357227 NPM2Q86SE8 214 aaKnown RBP21.66■■□□□ 1.06
CDK16-202ENST00000357227 PODXL2Q9NZ53 605 aa21.66■■□□□ 1.06
CDK16-202ENST00000357227 GOLGA3Q08378 1498 aa21.66■■□□□ 1.06
CDK16-202ENST00000357227 CLIP1P30622 1438 aa21.65■■□□□ 1.06
CDK16-202ENST00000357227 C11orf95C9JLR9 678 aaPredicted RBP21.65■■□□□ 1.06
CDK16-202ENST00000357227 SIN3AQ96ST3 1273 aa21.62■■□□□ 1.05
CDK16-202ENST00000357227 VSIG10Q8N0Z9 540 aa21.61■■□□□ 1.05
CDK16-202ENST00000357227 WASHC2CQ9Y4E1 1318 aa21.61■■□□□ 1.05
CDK16-202ENST00000357227 VPS8Q8N3P4 1428 aa21.6■■□□□ 1.05
CDK16-202ENST00000357227 WDR97A6NE52 1622 aa21.6■■□□□ 1.05
CDK16-202ENST00000357227 ZMYND15Q9H091 742 aa21.58■■□□□ 1.05
CDK16-202ENST00000357227 EEA1Q15075 1411 aa21.56■■□□□ 1.04
CDK16-202ENST00000357227 BAZ1BQ9UIG0 1483 aaKnown RBP21.55■■□□□ 1.04
CDK16-202ENST00000357227 RSPH6AQ9H0K4 717 aa21.52■■□□□ 1.04
CDK16-202ENST00000357227 GLIPR1L2Q4G1C9 344 aa21.51■■□□□ 1.03
CDK16-202ENST00000357227 USP35Q9P2H5 1018 aa21.48■■□□□ 1.03
CDK16-202ENST00000357227 GSE1Q14687 1217 aa21.46■■□□□ 1.03
CDK16-202ENST00000357227 KANK4Q5T7N3 995 aaPredicted RBP21.44■■□□□ 1.02
CDK16-202ENST00000357227 MAPKBP1O60336 1514 aa21.43■■□□□ 1.02
CDK16-202ENST00000357227 SLC24A1O60721 1099 aa21.43■■□□□ 1.02
CDK16-202ENST00000357227 CEP164Q9UPV0 1460 aa21.43■■□□□ 1.02
CDK16-202ENST00000357227 FRAT1Q92837 279 aaPredicted RBP21.4■■□□□ 1.02
CDK16-202ENST00000357227 RAB3GAP2Q9H2M9 1393 aa21.39■■□□□ 1.01
CDK16-202ENST00000357227 FAM9BQ8IZU0 186 aa21.38■■□□□ 1.01
CDK16-202ENST00000357227 RAPGEF2Q9Y4G8 1499 aa21.38■■□□□ 1.01
CDK16-202ENST00000357227 PPM1GO15355 546 aaPredicted RBP21.37■■□□□ 1.01
CDK16-202ENST00000357227 ATAD2BQ9ULI0 1458 aa21.37■■□□□ 1.01
CDK16-202ENST00000357227 CCDC184Q52MB2 194 aa21.37■■□□□ 1.01
CDK16-202ENST00000357227 DNAJC5BQ9UF47 199 aa21.36■■□□□ 1.01
CDK16-202ENST00000357227 SYNJ1O43426 1573 aa21.35■■□□□ 1.01
CDK16-202ENST00000357227 FAM43AQ8N2R8 423 aa21.3■■□□□ 1
CDK16-202ENST00000357227 KIF21BO75037 1637 aa21.29■■□□□ 1
CDK16-202ENST00000357227 CC2D2AQ9P2K1 1620 aa21.27■■□□□ 1
CDK16-202ENST00000357227 AKNAQ7Z591 1439 aa21.27■■□□□ 1
CDK16-202ENST00000357227 NFKBIBQ15653 356 aa21.27■□□□□ 0.99
CDK16-202ENST00000357227 CUX2O14529 1486 aa21.26■□□□□ 0.99
CDK16-202ENST00000357227 DCAF11Q8TEB1 546 aa21.26■□□□□ 0.99
CDK16-202ENST00000357227 CCNB3Q8WWL7 1395 aa21.25■□□□□ 0.99
CDK16-202ENST00000357227 A0A0U1RQG5 324 aaPredicted RBP21.24■□□□□ 0.99
CDK16-202ENST00000357227 SENP3-EIF4A1A0A087X0R7 540 aa21.24■□□□□ 0.99
CDK16-202ENST00000357227 RRBP1Q9P2E9 1410 aaKnown RBP21.24■□□□□ 0.99
CDK16-202ENST00000357227 SLC4A3P48751 1232 aa21.21■□□□□ 0.99
CDK16-202ENST00000357227 ATP1B4Q9UN42 357 aaPredicted RBP21.21■□□□□ 0.99
CDK16-202ENST00000357227 PDE4AP27815 886 aa21.19■□□□□ 0.98
CDK16-202ENST00000357227 HSP90AA2PQ14568 343 aaPredicted RBP21.19■□□□□ 0.98
CDK16-202ENST00000357227 DAXXQ9UER7 740 aaPredicted RBP21.19■□□□□ 0.98
CDK16-202ENST00000357227 ZBED9Q6R2W3 1325 aa21.18■□□□□ 0.98
CDK16-202ENST00000357227 MRS2Q9HD23 443 aa21.18■□□□□ 0.98
CDK16-202ENST00000357227 NAP1L5Q96NT1 182 aaPredicted RBP21.16■□□□□ 0.98
CDK16-202ENST00000357227 RRAGDQ9NQL2 400 aaPredicted RBP21.16■□□□□ 0.98
CDK16-202ENST00000357227 NCAPD3P42695 1498 aa21.13■□□□□ 0.97
CDK16-202ENST00000357227 SETD5Q9C0A6 1442 aa21.1■□□□□ 0.97
CDK16-202ENST00000357227 CNGB1Q14028 1251 aaPredicted RBP21.09■□□□□ 0.97
CDK16-202ENST00000357227 PEG3Q9GZU2 1588 aa21.09■□□□□ 0.97
CDK16-202ENST00000357227 BACH2Q9BYV9 841 aa21.08■□□□□ 0.97
CDK16-202ENST00000357227 P3H3Q8IVL6 736 aa21.07■□□□□ 0.96
CDK16-202ENST00000357227 TONSLQ96HA7 1378 aa21.07■□□□□ 0.96
CDK16-202ENST00000357227 FRAT2O75474 233 aaPredicted RBP21.07■□□□□ 0.96
CDK16-202ENST00000357227 HSP90AA1P07900 732 aaKnown RBP21.07■□□□□ 0.96
CDK16-202ENST00000357227 TCERG1O14776 1098 aaKnown RBP21.05■□□□□ 0.96
CDK16-202ENST00000357227 RBM10P98175 930 aaKnown RBP21.03■□□□□ 0.96
CDK16-202ENST00000357227 SKAP1Q86WV1 359 aa21.03■□□□□ 0.96
CDK16-202ENST00000357227 FAM50AQ14320 339 aaKnown RBP21.02■□□□□ 0.96
CDK16-202ENST00000357227 ARXQ96QS3 562 aa21.02■□□□□ 0.96
CDK16-202ENST00000357227 RRP9O43818 475 aaKnown RBP21.02■□□□□ 0.95
CDK16-202ENST00000357227 ARID4BQ4LE39 1312 aaPredicted RBP21.02■□□□□ 0.95
CDK16-202ENST00000357227 DDRGK1Q96HY6 314 aa21.02■□□□□ 0.95
CDK16-202ENST00000357227 ARAP1Q96P48 1450 aa21.01■□□□□ 0.95
CDK16-202ENST00000357227 NUDCQ9Y266 331 aa21.01■□□□□ 0.95
CDK16-202ENST00000357227 PRKRIP1Q9H875 184 aaPredicted RBP20.99■□□□□ 0.95
CDK16-202ENST00000357227 SMG6Q86US8 1419 aaKnown RBP20.98■□□□□ 0.95
CDK16-202ENST00000357227 EXOC6Q8TAG9 804 aa20.96■□□□□ 0.95
CDK16-202ENST00000357227 PNNQ9H307 717 aaKnown RBP20.96■□□□□ 0.95
CDK16-202ENST00000357227 HMGXB3Q12766 1538 aa20.95■□□□□ 0.95
CDK16-202ENST00000357227 HSPA5P11021 654 aaKnown RBP20.95■□□□□ 0.94
CDK16-202ENST00000357227 RNF123Q5XPI4 1314 aa20.93■□□□□ 0.94
CDK16-202ENST00000357227 KIF27Q86VH2 1401 aa20.92■□□□□ 0.94
CDK16-202ENST00000357227 POGKQ9P215 609 aa20.91■□□□□ 0.94
CDK16-202ENST00000357227 AAMPQ13685 434 aa20.9■□□□□ 0.94
CDK16-202ENST00000357227 TOP2BQ02880 1626 aa20.9■□□□□ 0.94
CDK16-202ENST00000357227 PRXQ9BXM0 1461 aa20.9■□□□□ 0.94
CDK16-202ENST00000357227 CNTLNQ9NXG0 1405 aa20.88■□□□□ 0.93
CDK16-202ENST00000357227 MS4A1P11836 297 aa20.87■□□□□ 0.93
CDK16-202ENST00000357227 FGD1P98174 961 aa20.83■□□□□ 0.92
CDK16-202ENST00000357227 FHAD1B1AJZ9 1412 aa20.82■□□□□ 0.92
CDK16-202ENST00000357227 CUX1P39880 1505 aa20.81■□□□□ 0.92
CDK16-202ENST00000357227 RGS3P49796 1198 aa20.79■□□□□ 0.92
CDK16-202ENST00000357227 RRP1P56182 461 aaKnown RBP20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms