RNA–Protein interactions for RNA: ENST00000356861.9

TNPO2-201, Transcript of transportin 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNPO2, Length 4,962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO2-201ENST00000356861 BCL11AQ9H165 835 aa24.43■■□□□ 1.5
TNPO2-201ENST00000356861 SALL2Q9Y467 1007 aaPredicted RBP24.42■■□□□ 1.5
TNPO2-201ENST00000356861 ESF1Q9H501 851 aaKnown RBP24.41■■□□□ 1.5
TNPO2-201ENST00000356861 STAG3Q9UJ98 1225 aa24.39■■□□□ 1.49
TNPO2-201ENST00000356861 CCDC136Q96JN2 1154 aa24.36■■□□□ 1.49
TNPO2-201ENST00000356861 SOGA1O94964 1423 aa24.35■■□□□ 1.49
TNPO2-201ENST00000356861 PLEKHD1A6NEE1 506 aa24.34■■□□□ 1.49
TNPO2-201ENST00000356861 MROH2BQ7Z745 1585 aa24.29■■□□□ 1.48
TNPO2-201ENST00000356861 WDR43Q15061 677 aaKnown RBP eCLIP24.29■■□□□ 1.482e-62■□□□□ 8.7
TNPO2-201ENST00000356861 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.25■■□□□ 1.47
TNPO2-201ENST00000356861 CFDP1Q9UEE9 299 aaPredicted RBP24.25■■□□□ 1.47
TNPO2-201ENST00000356861 CCNB3Q8WWL7 1395 aa24.22■■□□□ 1.47
TNPO2-201ENST00000356861 IRX6P78412 446 aaPredicted RBP24.2■■□□□ 1.47
TNPO2-201ENST00000356861 CCDC88BA6NC98 1476 aa24.2■■□□□ 1.46
TNPO2-201ENST00000356861 FHAD1B1AJZ9 1412 aa24.2■■□□□ 1.46
TNPO2-201ENST00000356861 UPF2Q9HAU5 1272 aaKnown RBP24.2■■□□□ 1.46
TNPO2-201ENST00000356861 CARMIL1Q5VZK9 1371 aa24.18■■□□□ 1.46
TNPO2-201ENST00000356861 KCNH8Q96L42 1107 aa24.18■■□□□ 1.46
TNPO2-201ENST00000356861 SIN3AQ96ST3 1273 aa24.18■■□□□ 1.46
TNPO2-201ENST00000356861 CUX2O14529 1486 aa24.14■■□□□ 1.46
TNPO2-201ENST00000356861 VPS8Q8N3P4 1428 aa24.14■■□□□ 1.46
TNPO2-201ENST00000356861 RGL3Q3MIN7 710 aa24.13■■□□□ 1.45
TNPO2-201ENST00000356861 ABCC8Q09428 1581 aa24.1■■□□□ 1.45
TNPO2-201ENST00000356861 HSP90AA1P07900 732 aaKnown RBP24.07■■□□□ 1.44
TNPO2-201ENST00000356861 CARD11Q9BXL7 1154 aa24.04■■□□□ 1.44
TNPO2-201ENST00000356861 TIMELESSQ9UNS1 1208 aa24.04■■□□□ 1.44
TNPO2-201ENST00000356861 PLPPR3Q6T4P5 718 aa24.01■■□□□ 1.43
TNPO2-201ENST00000356861 CDCA8Q53HL2 280 aa23.99■■□□□ 1.43
TNPO2-201ENST00000356861 SUPT16HQ9Y5B9 1047 aaKnown RBP23.97■■□□□ 1.43
TNPO2-201ENST00000356861 SMARCA2P51531 1590 aa23.97■■□□□ 1.43
TNPO2-201ENST00000356861 KANK4Q5T7N3 995 aaPredicted RBP23.97■■□□□ 1.43
TNPO2-201ENST00000356861 SETD5Q9C0A6 1442 aa23.93■■□□□ 1.42
TNPO2-201ENST00000356861 KNSTRNQ9Y448 316 aa23.93■■□□□ 1.42
TNPO2-201ENST00000356861 NBR1Q14596 966 aa23.93■■□□□ 1.42
TNPO2-201ENST00000356861 TOP2AP11388 1531 aaKnown RBP23.92■■□□□ 1.42
TNPO2-201ENST00000356861 ANP32BQ92688 251 aaKnown RBP23.9■■□□□ 1.42
TNPO2-201ENST00000356861 WIZO95785 1651 aa23.89■■□□□ 1.42
TNPO2-201ENST00000356861 ERCC6Q03468 1493 aa23.88■■□□□ 1.41
TNPO2-201ENST00000356861 SENP3-EIF4A1A0A087X0R7 540 aa23.87■■□□□ 1.41
TNPO2-201ENST00000356861 EIF4G1Q04637 1599 aaKnown RBP23.87■■□□□ 1.41
TNPO2-201ENST00000356861 ARHGAP35Q9NRY4 1499 aa23.87■■□□□ 1.41
TNPO2-201ENST00000356861 PPP1R15AO75807 674 aaPredicted RBP23.83■■□□□ 1.41
TNPO2-201ENST00000356861 CFAP53Q96M91 514 aa23.83■■□□□ 1.41
TNPO2-201ENST00000356861 SENP3Q9H4L4 574 aaPredicted RBP23.82■■□□□ 1.4
TNPO2-201ENST00000356861 MYH16Q9H6N6 1097 aa23.79■■□□□ 1.4
TNPO2-201ENST00000356861 CCER2I3L3R5 266 aa23.79■■□□□ 1.4
TNPO2-201ENST00000356861 PPP4R2Q9NY27 417 aa23.78■■□□□ 1.4
TNPO2-201ENST00000356861 RAB3GAP2Q9H2M9 1393 aa23.77■■□□□ 1.4
TNPO2-201ENST00000356861 DCAF11Q8TEB1 546 aa23.76■■□□□ 1.39
TNPO2-201ENST00000356861 FMN1Q68DA7 1419 aa23.76■■□□□ 1.39
TNPO2-201ENST00000356861 DDRGK1Q96HY6 314 aa23.73■■□□□ 1.39
TNPO2-201ENST00000356861 TDRD9Q8NDG6 1382 aaKnown RBP23.72■■□□□ 1.39
TNPO2-201ENST00000356861 PDS5BQ9NTI5 1447 aa23.71■■□□□ 1.39
TNPO2-201ENST00000356861 HSPA5P11021 654 aaKnown RBP23.71■■□□□ 1.39
TNPO2-201ENST00000356861 TMF1P82094 1093 aa23.68■■□□□ 1.38
TNPO2-201ENST00000356861 BECN1Q14457 450 aa23.67■■□□□ 1.38
TNPO2-201ENST00000356861 CC2D1BQ5T0F9 858 aaKnown RBP23.67■■□□□ 1.38
TNPO2-201ENST00000356861 RAPGEF2Q9Y4G8 1499 aa23.66■■□□□ 1.38
TNPO2-201ENST00000356861 PKD2Q13563 968 aa23.65■■□□□ 1.38
TNPO2-201ENST00000356861 CADPSQ9ULU8 1353 aa23.65■■□□□ 1.38
TNPO2-201ENST00000356861 EIF5BO60841 1220 aaKnown RBP23.65■■□□□ 1.38
TNPO2-201ENST00000356861 NEUROD2Q15784 382 aa23.65■■□□□ 1.38
TNPO2-201ENST00000356861 ATAD2BQ9ULI0 1458 aa23.64■■□□□ 1.38
TNPO2-201ENST00000356861 FOXD1Q16676 465 aa23.62■■□□□ 1.37
TNPO2-201ENST00000356861 MPHOSPH9Q99550 1183 aa23.62■■□□□ 1.37
TNPO2-201ENST00000356861 PPM1GO15355 546 aaPredicted RBP23.62■■□□□ 1.37
TNPO2-201ENST00000356861 NUDCQ9Y266 331 aa23.62■■□□□ 1.37
TNPO2-201ENST00000356861 CARMIL2Q6F5E8 1435 aa23.61■■□□□ 1.37
TNPO2-201ENST00000356861 ARXQ96QS3 562 aa23.6■■□□□ 1.37
TNPO2-201ENST00000356861 ANP32EQ9BTT0 268 aa23.6■■□□□ 1.37
TNPO2-201ENST00000356861 SMARCA4P51532 1647 aa23.59■■□□□ 1.37
TNPO2-201ENST00000356861 MAPK8IP3Q9UPT6 1336 aa23.59■■□□□ 1.37
TNPO2-201ENST00000356861 FTSJ3Q8IY81 847 aaKnown RBP23.59■■□□□ 1.37
TNPO2-201ENST00000356861 POGKQ9P215 609 aa23.59■■□□□ 1.37
TNPO2-201ENST00000356861 B4GALNT3Q6L9W6 998 aa23.58■■□□□ 1.37
TNPO2-201ENST00000356861 C14orf37Q86TY3 774 aa23.58■■□□□ 1.36
TNPO2-201ENST00000356861 KANK1Q14678 1352 aa23.58■■□□□ 1.36
TNPO2-201ENST00000356861 FHOD3Q2V2M9 1422 aa23.56■■□□□ 1.36
TNPO2-201ENST00000356861 RUSC2Q8N2Y8 1516 aa23.55■■□□□ 1.36
TNPO2-201ENST00000356861 TNNT2P45379 298 aaPredicted RBP23.54■■□□□ 1.36
TNPO2-201ENST00000356861 ARID4BQ4LE39 1312 aaPredicted RBP23.53■■□□□ 1.36
TNPO2-201ENST00000356861 ZBTB7CA1YPR0 619 aa23.51■■□□□ 1.35
TNPO2-201ENST00000356861 FRAT1Q92837 279 aaPredicted RBP23.51■■□□□ 1.35
TNPO2-201ENST00000356861 NUP155O75694 1391 aa23.5■■□□□ 1.35
TNPO2-201ENST00000356861 ANKRD30AQ9BXX3 1397 aa23.5■■□□□ 1.35
TNPO2-201ENST00000356861 RGS3P49796 1198 aa23.49■■□□□ 1.35
TNPO2-201ENST00000356861 PLEKHG5O94827 1062 aa23.47■■□□□ 1.35
TNPO2-201ENST00000356861 LAS1LQ9Y4W2 734 aaKnown RBP23.45■■□□□ 1.35
TNPO2-201ENST00000356861 U2SURPO15042 1029 aaKnown RBP23.45■■□□□ 1.34
TNPO2-201ENST00000356861 L3MBTL2Q969R5 705 aa23.45■■□□□ 1.34
TNPO2-201ENST00000356861 DHX57Q6P158 1386 aaKnown RBP23.44■■□□□ 1.34
TNPO2-201ENST00000356861 KTN1Q86UP2 1357 aaKnown RBP23.44■■□□□ 1.34
TNPO2-201ENST00000356861 MS4A1P11836 297 aa23.43■■□□□ 1.34
TNPO2-201ENST00000356861 EFCAB2Q5VUJ9 269 aa23.42■■□□□ 1.34
TNPO2-201ENST00000356861 GOLGA6L22H0YM25 854 aa23.41■■□□□ 1.34
TNPO2-201ENST00000356861 ERICH6BQ5W0A0 696 aa23.41■■□□□ 1.34
TNPO2-201ENST00000356861 NOP58Q9Y2X3 529 aaKnown RBP23.41■■□□□ 1.34
TNPO2-201ENST00000356861 ROCK2O75116 1388 aaKnown RBP23.4■■□□□ 1.34
TNPO2-201ENST00000356861 PNNQ9H307 717 aaKnown RBP23.4■■□□□ 1.34
TNPO2-201ENST00000356861 MORC1Q86VD1 984 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms