RNA–Protein interactions for RNA: ENST00000355637.8

RBFOX1-203, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 3,321 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-203ENST00000355637 NAP1L5Q96NT1 182 aaPredicted RBP12.28□□□□□ -0.44
RBFOX1-203ENST00000355637 UBTFP17480 764 aaKnown RBP12.28□□□□□ -0.44
RBFOX1-203ENST00000355637 IRX6P78412 446 aaPredicted RBP12.28□□□□□ -0.44
RBFOX1-203ENST00000355637 HAP1P54257 671 aaPredicted RBP12.27□□□□□ -0.44
RBFOX1-203ENST00000355637 PLPPR3Q6T4P5 718 aa12.27□□□□□ -0.45
RBFOX1-203ENST00000355637 BBXQ8WY36 941 aaPredicted RBP12.27□□□□□ -0.45
RBFOX1-203ENST00000355637 NAP1L2Q9ULW6 460 aaPredicted RBP12.27□□□□□ -0.45
RBFOX1-203ENST00000355637 BAZ1AQ9NRL2 1556 aaPredicted RBP12.26□□□□□ -0.45
RBFOX1-203ENST00000355637 PABPN1Q86U42 306 aaKnown RBP eCLIP12.26□□□□□ -0.45
RBFOX1-203ENST00000355637 ARXQ96QS3 562 aa12.25□□□□□ -0.45
RBFOX1-203ENST00000355637 ZBTB47Q9UFB7 747 aaPredicted RBP12.25□□□□□ -0.45
RBFOX1-203ENST00000355637 KCNH8Q96L42 1107 aa12.24□□□□□ -0.45
RBFOX1-203ENST00000355637 ARID4BQ4LE39 1312 aaPredicted RBP12.24□□□□□ -0.45
RBFOX1-203ENST00000355637 LAS1LQ9Y4W2 734 aaKnown RBP12.23□□□□□ -0.45
RBFOX1-203ENST00000355637 CHMP4AQ9BY43 222 aa12.22□□□□□ -0.45
RBFOX1-203ENST00000355637 ABCC8Q09428 1581 aa12.22□□□□□ -0.45
RBFOX1-203ENST00000355637 RGS3P49796 1198 aa12.21□□□□□ -0.45
RBFOX1-203ENST00000355637 CCDC88BA6NC98 1476 aa12.2□□□□□ -0.46
RBFOX1-203ENST00000355637 HSP90AA1P07900 732 aaKnown RBP12.19□□□□□ -0.46
RBFOX1-203ENST00000355637 ANP32AP39687 249 aaKnown RBP12.19□□□□□ -0.46
RBFOX1-203ENST00000355637 C11orf95C9JLR9 678 aaPredicted RBP12.17□□□□□ -0.46
RBFOX1-203ENST00000355637 TRIM52Q96A61 297 aa12.17□□□□□ -0.46
RBFOX1-203ENST00000355637 SOGA1O94964 1423 aa12.17□□□□□ -0.46
RBFOX1-203ENST00000355637 TULP1O00294 542 aaPredicted RBP12.16□□□□□ -0.46
RBFOX1-203ENST00000355637 TOP2AP11388 1531 aaKnown RBP12.15□□□□□ -0.46
RBFOX1-203ENST00000355637 CEP162Q5TB80 1403 aa12.15□□□□□ -0.46
RBFOX1-203ENST00000355637 RRP9O43818 475 aaKnown RBP12.14□□□□□ -0.47
RBFOX1-203ENST00000355637 USP35Q9P2H5 1018 aa12.13□□□□□ -0.47
RBFOX1-203ENST00000355637 AMER1Q5JTC6 1135 aaPredicted RBP12.12□□□□□ -0.47
RBFOX1-203ENST00000355637 PLCD3Q8N3E9 789 aa12.12□□□□□ -0.47
RBFOX1-203ENST00000355637 SMARCA4P51532 1647 aa12.12□□□□□ -0.47
RBFOX1-203ENST00000355637 CANXP27824 592 aaKnown RBP12.11□□□□□ -0.47
RBFOX1-203ENST00000355637 NPM2Q86SE8 214 aaKnown RBP12.11□□□□□ -0.47
RBFOX1-203ENST00000355637 BRD2P25440 801 aaKnown RBP12.1□□□□□ -0.47
RBFOX1-203ENST00000355637 IPO9Q96P70 1041 aaKnown RBP12.09□□□□□ -0.47
RBFOX1-203ENST00000355637 SMARCA2P51531 1590 aa12.09□□□□□ -0.47
RBFOX1-203ENST00000355637 FAM43AQ8N2R8 423 aa12.08□□□□□ -0.48
RBFOX1-203ENST00000355637 EIF4G1Q04637 1599 aaKnown RBP12.08□□□□□ -0.48
RBFOX1-203ENST00000355637 ZNF326Q5BKZ1 582 aaKnown RBP12.08□□□□□ -0.48
RBFOX1-203ENST00000355637 TNIKQ9UKE5 1360 aa12.08□□□□□ -0.48
RBFOX1-203ENST00000355637 HNRNPUL2Q1KMD3 747 aaKnown RBP12.08□□□□□ -0.48
RBFOX1-203ENST00000355637 RUSC2Q8N2Y8 1516 aa12.07□□□□□ -0.48
RBFOX1-203ENST00000355637 GSE1Q14687 1217 aa12.07□□□□□ -0.48
RBFOX1-203ENST00000355637 WASHC2AQ641Q2 1341 aa12.06□□□□□ -0.48
RBFOX1-203ENST00000355637 WASHC2CQ9Y4E1 1318 aa12.05□□□□□ -0.48
RBFOX1-203ENST00000355637 CNGB1Q14028 1251 aaPredicted RBP12.04□□□□□ -0.48
RBFOX1-203ENST00000355637 GTF2E1P29083 439 aaPredicted RBP12.03□□□□□ -0.48
RBFOX1-203ENST00000355637 UNC13AQ9UPW8 1703 aa12.03□□□□□ -0.48
RBFOX1-203ENST00000355637 WRNQ14191 1432 aaPredicted RBP eCLIP12.03□□□□□ -0.48
RBFOX1-203ENST00000355637 EEA1Q15075 1411 aa12.02□□□□□ -0.48
RBFOX1-203ENST00000355637 B4GALNT3Q6L9W6 998 aa12.02□□□□□ -0.49
RBFOX1-203ENST00000355637 ZFP91Q96JP5 570 aaPredicted RBP12.02□□□□□ -0.49
RBFOX1-203ENST00000355637 RSPH4AQ5TD94 716 aa12.02□□□□□ -0.49
RBFOX1-203ENST00000355637 FOXD1Q16676 465 aa12.01□□□□□ -0.49
RBFOX1-203ENST00000355637 FRAT1Q92837 279 aaPredicted RBP12.01□□□□□ -0.49
RBFOX1-203ENST00000355637 GOLGA3Q08378 1498 aa12.01□□□□□ -0.49
RBFOX1-203ENST00000355637 PNNQ9H307 717 aaKnown RBP12□□□□□ -0.49
RBFOX1-203ENST00000355637 SAMD1Q6SPF0 538 aaPredicted RBP11.99□□□□□ -0.49
RBFOX1-203ENST00000355637 VGLL3A8MV65 326 aa11.98□□□□□ -0.49
RBFOX1-203ENST00000355637 IPO4Q8TEX9 1081 aaKnown RBP11.98□□□□□ -0.49
RBFOX1-203ENST00000355637 STAC3Q96MF2 364 aa11.97□□□□□ -0.49
RBFOX1-203ENST00000355637 PRDM4Q9UKN5 801 aa11.97□□□□□ -0.49
RBFOX1-203ENST00000355637 ZHX1Q9UKY1 873 aaPredicted RBP11.97□□□□□ -0.49
RBFOX1-203ENST00000355637 C14orf37Q86TY3 774 aa11.96□□□□□ -0.5
RBFOX1-203ENST00000355637 HOMEZQ8IX15 550 aa11.94□□□□□ -0.5
RBFOX1-203ENST00000355637 ARID3AQ99856 593 aa11.94□□□□□ -0.5
RBFOX1-203ENST00000355637 RRAGDQ9NQL2 400 aaPredicted RBP11.94□□□□□ -0.5
RBFOX1-203ENST00000355637 CLIP1P30622 1438 aa11.94□□□□□ -0.5
RBFOX1-203ENST00000355637 PPM1GO15355 546 aaPredicted RBP11.93□□□□□ -0.5
RBFOX1-203ENST00000355637 CALD1Q05682 793 aaKnown RBP11.92□□□□□ -0.5
RBFOX1-203ENST00000355637 DCAF11Q8TEB1 546 aa11.92□□□□□ -0.5
RBFOX1-203ENST00000355637 SECISBP2LQ93073 1101 aaKnown RBP11.92□□□□□ -0.5
RBFOX1-203ENST00000355637 CEP164Q9UPV0 1460 aa11.92□□□□□ -0.5
RBFOX1-203ENST00000355637 PPP4R2Q9NY27 417 aa11.91□□□□□ -0.5
RBFOX1-203ENST00000355637 MAPK8IP2Q13387 824 aaPredicted RBP11.9□□□□□ -0.5
RBFOX1-203ENST00000355637 BAZ1BQ9UIG0 1483 aaKnown RBP11.89□□□□□ -0.51
RBFOX1-203ENST00000355637 FTSJ3Q8IY81 847 aaKnown RBP11.88□□□□□ -0.51
RBFOX1-203ENST00000355637 BICRAQ9NZM4 1560 aa11.87□□□□□ -0.51
RBFOX1-203ENST00000355637 SYNJ1O43426 1573 aa11.86□□□□□ -0.51
RBFOX1-203ENST00000355637 ATAD2BQ9ULI0 1458 aa11.85□□□□□ -0.51
RBFOX1-203ENST00000355637 ZNF830Q96NB3 372 aaPredicted RBP11.85□□□□□ -0.51
RBFOX1-203ENST00000355637 PDCL3Q9H2J4 239 aa11.84□□□□□ -0.51
RBFOX1-203ENST00000355637 RAPGEF2Q9Y4G8 1499 aa11.84□□□□□ -0.51
RBFOX1-203ENST00000355637 DDX10Q13206 875 aaKnown RBP11.83□□□□□ -0.52
RBFOX1-203ENST00000355637 PRDM10Q9NQV6 1147 aa11.83□□□□□ -0.52
RBFOX1-203ENST00000355637 VPS8Q8N3P4 1428 aa11.83□□□□□ -0.52
RBFOX1-203ENST00000355637 NFKBIBQ15653 356 aa11.83□□□□□ -0.52
RBFOX1-203ENST00000355637 E9PSI1 815 aa11.81□□□□□ -0.52
RBFOX1-203ENST00000355637 NCLP19338 710 aaKnown RBP11.81□□□□□ -0.52
RBFOX1-203ENST00000355637 POLR3GLQ9BT43 218 aa11.81□□□□□ -0.52
RBFOX1-203ENST00000355637 CDK11BP21127 795 aaKnown RBP11.81□□□□□ -0.52
RBFOX1-203ENST00000355637 CNPY4Q8N129 248 aa11.81□□□□□ -0.52
RBFOX1-203ENST00000355637 HNRNPUQ00839 825 aaKnown RBP eCLIP11.8□□□□□ -0.52
RBFOX1-203ENST00000355637 ANP32BQ92688 251 aaKnown RBP11.8□□□□□ -0.52
RBFOX1-203ENST00000355637 DDRGK1Q96HY6 314 aa11.77□□□□□ -0.52
RBFOX1-203ENST00000355637 KIF21BO75037 1637 aa11.77□□□□□ -0.53
RBFOX1-203ENST00000355637 WWC1Q8IX03 1113 aa11.77□□□□□ -0.53
RBFOX1-203ENST00000355637 PEG3Q9GZU2 1588 aa11.76□□□□□ -0.53
RBFOX1-203ENST00000355637 TEX2Q8IWB9 1127 aa11.76□□□□□ -0.53
RBFOX1-203ENST00000355637 SLC4A3P48751 1232 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms