RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 HRCP23327 699 aa39.73■■■■□ 3.95
CLK2-201ENST00000355560 GRIN2BQ13224 1484 aa39.7■■■■□ 3.95
CLK2-201ENST00000355560 ADAMTS12P58397 1594 aa39.66■■■■□ 3.94
CLK2-201ENST00000355560 FHAD1B1AJZ9 1412 aa39.65■■■■□ 3.94
CLK2-201ENST00000355560 EIF4G3O43432 1585 aaKnown RBP39.62■■■■□ 3.93
CLK2-201ENST00000355560 EFCAB5A4FU69 1503 aa39.58■■■■□ 3.93
CLK2-201ENST00000355560 P3H3Q8IVL6 736 aa39.46■■■■□ 3.91
CLK2-201ENST00000355560 SNAPC4Q5SXM2 1469 aa39.45■■■■□ 3.91
CLK2-201ENST00000355560 FHOD3Q2V2M9 1422 aa39.45■■■■□ 3.91
CLK2-201ENST00000355560 SAMD9Q5K651 1589 aa39.39■■■■□ 3.9
CLK2-201ENST00000355560 PCF11O94913 1555 aaKnown RBP39.35■■■■□ 3.89
CLK2-201ENST00000355560 KANK4Q5T7N3 995 aaPredicted RBP39.34■■■■□ 3.89
CLK2-201ENST00000355560 MAGI1Q96QZ7 1491 aaPredicted RBP39.32■■■■□ 3.88
CLK2-201ENST00000355560 IQGAP2Q13576 1575 aa39.31■■■■□ 3.88
CLK2-201ENST00000355560 TIAM1Q13009 1591 aa39.28■■■■□ 3.88
CLK2-201ENST00000355560 MAP3K1Q13233 1512 aa39.28■■■■□ 3.88
CLK2-201ENST00000355560 GRIN2AQ12879 1464 aa39.26■■■■□ 3.88
CLK2-201ENST00000355560 FMN1Q68DA7 1419 aa39.24■■■■□ 3.87
CLK2-201ENST00000355560 FYCO1Q9BQS8 1478 aa39.23■■■■□ 3.87
CLK2-201ENST00000355560 CASKIN1Q8WXD9 1431 aa39.19■■■■□ 3.86
CLK2-201ENST00000355560 SYNJ2O15056 1496 aa39.18■■■■□ 3.86
CLK2-201ENST00000355560 CFAP43Q8NDM7 1665 aa39.18■■■■□ 3.86
CLK2-201ENST00000355560 KIAA0586Q9BVV6 1533 aa39.12■■■■□ 3.85
CLK2-201ENST00000355560 ATP1B4Q9UN42 357 aaPredicted RBP39.11■■■■□ 3.85
CLK2-201ENST00000355560 CHMP7Q8WUX9 453 aaPredicted RBP39.1■■■■□ 3.85
CLK2-201ENST00000355560 LRRC9Q6ZRR7 1453 aa39.09■■■■□ 3.85
CLK2-201ENST00000355560 UGGT2Q9NYU1 1516 aa39.08■■■■□ 3.85
CLK2-201ENST00000355560 CEP170Q5SW79 1584 aa39.02■■■■□ 3.84
CLK2-201ENST00000355560 FBLN2P98095 1184 aa39.01■■■■□ 3.83
CLK2-201ENST00000355560 ZEB1P37275 1124 aaPredicted RBP38.98■■■■□ 3.83
CLK2-201ENST00000355560 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.97■■■■□ 3.83
CLK2-201ENST00000355560 RRBP1Q9P2E9 1410 aaKnown RBP38.97■■■■□ 3.83
CLK2-201ENST00000355560 HNRNPUL2Q1KMD3 747 aaKnown RBP38.96■■■■□ 3.83
CLK2-201ENST00000355560 NUP160Q12769 1436 aa38.92■■■■□ 3.82
CLK2-201ENST00000355560 LRRIQ1Q96JM4 1722 aa38.92■■■■□ 3.82
CLK2-201ENST00000355560 KIAA0556O60303 1618 aa38.91■■■■□ 3.82
CLK2-201ENST00000355560 DISP1Q96F81 1524 aa38.89■■■■□ 3.82
CLK2-201ENST00000355560 CCER1Q8TC90 406 aaPredicted RBP38.85■■■■□ 3.81
CLK2-201ENST00000355560 CCNB3Q8WWL7 1395 aa38.84■■■■□ 3.81
CLK2-201ENST00000355560 HECW1Q76N89 1606 aa38.81■■■■□ 3.8
CLK2-201ENST00000355560 PHLDB1Q86UU1 1377 aa38.78■■■■□ 3.8
CLK2-201ENST00000355560 CCDC18Q5T9S5 1454 aa38.75■■■■□ 3.79
CLK2-201ENST00000355560 MTUS2Q5JR59 1369 aa38.72■■■■□ 3.79
CLK2-201ENST00000355560 CHD1O14646 1710 aa38.69■■■■□ 3.78
CLK2-201ENST00000355560 JPH4Q96JJ6 628 aa38.66■■■■□ 3.78
CLK2-201ENST00000355560 EPRSP07814 1512 aaKnown RBP38.65■■■■□ 3.78
CLK2-201ENST00000355560 EHBP1L1Q8N3D4 1523 aa38.64■■■■□ 3.78
CLK2-201ENST00000355560 CARMIL2Q6F5E8 1435 aa38.62■■■■□ 3.77
CLK2-201ENST00000355560 RAPGEF6Q8TEU7 1601 aa38.58■■■■□ 3.77
CLK2-201ENST00000355560 CDK13Q14004 1512 aaKnown RBP38.58■■■■□ 3.77
CLK2-201ENST00000355560 MAGI3Q5TCQ9 1506 aa38.58■■■■□ 3.77
CLK2-201ENST00000355560 SUPT6HQ7KZ85 1726 aaKnown RBP38.56■■■■□ 3.76
CLK2-201ENST00000355560 NCOA2Q15596 1464 aa38.53■■■■□ 3.76
CLK2-201ENST00000355560 NUP153P49790 1475 aaKnown RBP38.5■■■■□ 3.75
CLK2-201ENST00000355560 ITGAEP38570 1179 aa38.5■■■■□ 3.75
CLK2-201ENST00000355560 FAM50AQ14320 339 aaKnown RBP38.48■■■■□ 3.75
CLK2-201ENST00000355560 ARID3CA6NKF2 412 aa38.47■■■■□ 3.75
CLK2-201ENST00000355560 FGD6Q6ZV73 1430 aa38.46■■■■□ 3.75
CLK2-201ENST00000355560 PLB1Q6P1J6 1458 aa38.43■■■■□ 3.74
CLK2-201ENST00000355560 ARHGEF11O15085 1522 aa38.43■■■■□ 3.74
CLK2-201ENST00000355560 MYOM3Q5VTT5 1437 aa38.4■■■■□ 3.74
CLK2-201ENST00000355560 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP38.4■■■■□ 3.742e-7■□□□□ 8.8
CLK2-201ENST00000355560 PRG4Q92954 1404 aaPredicted RBP38.39■■■■□ 3.74
CLK2-201ENST00000355560 SHROOM2Q13796 1616 aa38.33■■■■□ 3.73
CLK2-201ENST00000355560 ABCA8O94911 1581 aa38.28■■■■□ 3.72
CLK2-201ENST00000355560 CDK11AQ9UQ88 783 aaPredicted RBP38.23■■■■□ 3.71
CLK2-201ENST00000355560 PTPN23Q9H3S7 1636 aa38.23■■■■□ 3.71
CLK2-201ENST00000355560 DHX57Q6P158 1386 aaKnown RBP38.21■■■■□ 3.71
CLK2-201ENST00000355560 PTPRGP23470 1445 aa38.19■■■■□ 3.7
CLK2-201ENST00000355560 CLASP1Q7Z460 1538 aa38.18■■■■□ 3.7
CLK2-201ENST00000355560 RAB3GAP2Q9H2M9 1393 aa38.18■■■■□ 3.7
CLK2-201ENST00000355560 SETD5Q9C0A6 1442 aa38.16■■■■□ 3.7
CLK2-201ENST00000355560 TROQ12816 1431 aaPredicted RBP38.14■■■■□ 3.7
CLK2-201ENST00000355560 TCOF1Q13428 1488 aaKnown RBP38.12■■■■□ 3.69
CLK2-201ENST00000355560 MIA2Q96PC5 1412 aa38.11■■■■□ 3.69
CLK2-201ENST00000355560 ERCC6L2Q5T890 1561 aa38.1■■■■□ 3.69
CLK2-201ENST00000355560 CLSPNQ9HAW4 1339 aa38.07■■■■□ 3.68
CLK2-201ENST00000355560 ATP10BO94823 1461 aa38.06■■■■□ 3.68
CLK2-201ENST00000355560 PTPRKQ15262 1439 aa38.05■■■■□ 3.68
CLK2-201ENST00000355560 ADCY10Q96PN6 1610 aa38.05■■■■□ 3.68
CLK2-201ENST00000355560 KIF14Q15058 1648 aa38.01■■■■□ 3.67
CLK2-201ENST00000355560 UACAQ9BZF9 1416 aa37.98■■■■□ 3.67
CLK2-201ENST00000355560 PLEKHD1A6NEE1 506 aa37.94■■■■□ 3.66
CLK2-201ENST00000355560 HFM1A2PYH4 1435 aa37.93■■■■□ 3.66
CLK2-201ENST00000355560 ITSN2Q9NZM3 1697 aa37.93■■■■□ 3.66
CLK2-201ENST00000355560 ABCC2Q92887 1545 aa37.87■■■■□ 3.65
CLK2-201ENST00000355560 GPATCH8Q9UKJ3 1502 aaKnown RBP37.85■■■■□ 3.65
CLK2-201ENST00000355560 NAIPQ13075 1403 aa37.83■■■■□ 3.65
CLK2-201ENST00000355560 MAPKBP1O60336 1514 aa37.81■■■■□ 3.64
CLK2-201ENST00000355560 ABCC10Q5T3U5 1492 aa37.79■■■■□ 3.64
CLK2-201ENST00000355560 DNMT1P26358 1616 aaKnown RBP37.78■■■■□ 3.64
CLK2-201ENST00000355560 ZNF644Q9H582 1327 aaPredicted RBP37.78■■■■□ 3.64
CLK2-201ENST00000355560 CFDP1Q9UEE9 299 aaPredicted RBP37.78■■■■□ 3.64
CLK2-201ENST00000355560 DAPK1P53355 1430 aa37.76■■■■□ 3.64
CLK2-201ENST00000355560 CHIC2Q9UKJ5 165 aa37.76■■■■□ 3.63
CLK2-201ENST00000355560 CDC42BPAQ5VT25 1732 aa37.76■■■■□ 3.63
CLK2-201ENST00000355560 CAMSAP2Q08AD1 1489 aa37.76■■■■□ 3.63
CLK2-201ENST00000355560 GCC2Q8IWJ2 1684 aa37.75■■■■□ 3.63
CLK2-201ENST00000355560 AKNAQ7Z591 1439 aa37.75■■■■□ 3.63
CLK2-201ENST00000355560 ABCC5O15440 1437 aa37.7■■■■□ 3.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms