RNA–Protein interactions for RNA: ENST00000353855.6

DNMT3B-204, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 5 BASIC

Gene DNMT3B, Length 4,237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-204ENST00000353855 ARXQ96QS3 562 aa19.24■□□□□ 0.67
DNMT3B-204ENST00000353855 CCDC88BA6NC98 1476 aa19.24■□□□□ 0.67
DNMT3B-204ENST00000353855 ABCC8Q09428 1581 aa19.24■□□□□ 0.67
DNMT3B-204ENST00000353855 NEFMP07197 916 aa19.22■□□□□ 0.67
DNMT3B-204ENST00000353855 WIZO95785 1651 aa19.22■□□□□ 0.67
DNMT3B-204ENST00000353855 KANK4Q5T7N3 995 aaPredicted RBP19.21■□□□□ 0.66
DNMT3B-204ENST00000353855 CCER2I3L3R5 266 aa19.19■□□□□ 0.66
DNMT3B-204ENST00000353855 ARID3CA6NKF2 412 aa19.17■□□□□ 0.66
DNMT3B-204ENST00000353855 CHIC2Q9UKJ5 165 aa19.17■□□□□ 0.66
DNMT3B-204ENST00000353855 CEP164Q9UPV0 1460 aa19.15■□□□□ 0.66
DNMT3B-204ENST00000353855 TMC1Q8TDI8 760 aa19.15■□□□□ 0.66
DNMT3B-204ENST00000353855 DHX57Q6P158 1386 aaKnown RBP19.14■□□□□ 0.66
DNMT3B-204ENST00000353855 EIF4G2P78344 907 aaKnown RBP eCLIP19.13■□□□□ 0.65
DNMT3B-204ENST00000353855 VPS8Q8N3P4 1428 aa19.12■□□□□ 0.65
DNMT3B-204ENST00000353855 CCNB3Q8WWL7 1395 aa19.1■□□□□ 0.65
DNMT3B-204ENST00000353855 FANCIQ9NVI1 1328 aa19.07■□□□□ 0.64
DNMT3B-204ENST00000353855 PRKCSHP14314 528 aaPredicted RBP19.06■□□□□ 0.64
DNMT3B-204ENST00000353855 ANO8Q9HCE9 1232 aaPredicted RBP19.05■□□□□ 0.64
DNMT3B-204ENST00000353855 GLIPR1L2Q4G1C9 344 aa19.05■□□□□ 0.64
DNMT3B-204ENST00000353855 RUSC2Q8N2Y8 1516 aa19.03■□□□□ 0.64
DNMT3B-204ENST00000353855 BAZ1BQ9UIG0 1483 aaKnown RBP19.02■□□□□ 0.64
DNMT3B-204ENST00000353855 MSH5O43196 834 aa19.01■□□□□ 0.63
DNMT3B-204ENST00000353855 RRP7BPQ9NSQ0 103 aa19.01■□□□□ 0.63
DNMT3B-204ENST00000353855 RAB3GAP2Q9H2M9 1393 aa19.01■□□□□ 0.63
DNMT3B-204ENST00000353855 PPM1GO15355 546 aaPredicted RBP19.01■□□□□ 0.63
DNMT3B-204ENST00000353855 TOP2AP11388 1531 aaKnown RBP18.98■□□□□ 0.63
DNMT3B-204ENST00000353855 CANXP27824 592 aaKnown RBP18.97■□□□□ 0.63
DNMT3B-204ENST00000353855 IPO9Q96P70 1041 aaKnown RBP18.97■□□□□ 0.63
DNMT3B-204ENST00000353855 SLC4A1APQ9BWU0 796 aaKnown RBP18.97■□□□□ 0.63
DNMT3B-204ENST00000353855 PPP1R15AO75807 674 aaPredicted RBP18.95■□□□□ 0.62
DNMT3B-204ENST00000353855 DDRGK1Q96HY6 314 aa18.92■□□□□ 0.62
DNMT3B-204ENST00000353855 ERICH6BQ5W0A0 696 aa18.92■□□□□ 0.62
DNMT3B-204ENST00000353855 HSPA5P11021 654 aaKnown RBP18.9■□□□□ 0.62
DNMT3B-204ENST00000353855 SETD5Q9C0A6 1442 aa18.9■□□□□ 0.62
DNMT3B-204ENST00000353855 KIF27Q86VH2 1401 aa18.88■□□□□ 0.61
DNMT3B-204ENST00000353855 TIMELESSQ9UNS1 1208 aa18.87■□□□□ 0.61
DNMT3B-204ENST00000353855 MTUS2Q5JR59 1369 aa18.86■□□□□ 0.61
DNMT3B-204ENST00000353855 PAK3O75914 559 aaPredicted RBP18.86■□□□□ 0.61
DNMT3B-204ENST00000353855 IL27Q8NEV9 243 aa18.85■□□□□ 0.61
DNMT3B-204ENST00000353855 KDM2AQ9Y2K7 1162 aa18.85■□□□□ 0.61
DNMT3B-204ENST00000353855 ZNF777Q9ULD5 760 aaPredicted RBP18.84■□□□□ 0.61
DNMT3B-204ENST00000353855 RGS3P49796 1198 aa18.82■□□□□ 0.6
DNMT3B-204ENST00000353855 NAP1L5Q96NT1 182 aaPredicted RBP18.81■□□□□ 0.6
DNMT3B-204ENST00000353855 SMARCA4P51532 1647 aa18.8■□□□□ 0.6
DNMT3B-204ENST00000353855 UPF2Q9HAU5 1272 aaKnown RBP18.79■□□□□ 0.6
DNMT3B-204ENST00000353855 RAPGEF2Q9Y4G8 1499 aa18.77■□□□□ 0.6
DNMT3B-204ENST00000353855 SLC4A3P48751 1232 aa18.73■□□□□ 0.59
DNMT3B-204ENST00000353855 FOXD1Q16676 465 aa18.73■□□□□ 0.59
DNMT3B-204ENST00000353855 SMARCA2P51531 1590 aa18.73■□□□□ 0.59
DNMT3B-204ENST00000353855 HSP90AA1P07900 732 aaKnown RBP18.71■□□□□ 0.59
DNMT3B-204ENST00000353855 ARID4BQ4LE39 1312 aaPredicted RBP18.7■□□□□ 0.58
DNMT3B-204ENST00000353855 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.7■□□□□ 0.58
DNMT3B-204ENST00000353855 NUDCQ9Y266 331 aa18.7■□□□□ 0.58
DNMT3B-204ENST00000353855 TCERG1O14776 1098 aaKnown RBP18.68■□□□□ 0.58
DNMT3B-204ENST00000353855 ANP32BQ92688 251 aaKnown RBP18.67■□□□□ 0.58
DNMT3B-204ENST00000353855 BECN1Q14457 450 aa18.66■□□□□ 0.58
DNMT3B-204ENST00000353855 FBLN2P98095 1184 aa18.66■□□□□ 0.58
DNMT3B-204ENST00000353855 WDR43Q15061 677 aaKnown RBP eCLIP18.65■□□□□ 0.58
DNMT3B-204ENST00000353855 PDE4AP27815 886 aa18.65■□□□□ 0.58
DNMT3B-204ENST00000353855 PRKRIP1Q9H875 184 aaPredicted RBP18.64■□□□□ 0.58
DNMT3B-204ENST00000353855 CUX2O14529 1486 aa18.63■□□□□ 0.57
DNMT3B-204ENST00000353855 RCAN3Q9UKA8 241 aa18.63■□□□□ 0.57
DNMT3B-204ENST00000353855 TRIM44Q96DX7 344 aaPredicted RBP18.63■□□□□ 0.57
DNMT3B-204ENST00000353855 GSE1Q14687 1217 aa18.62■□□□□ 0.57
DNMT3B-204ENST00000353855 CARMIL1Q5VZK9 1371 aa18.62■□□□□ 0.57
DNMT3B-204ENST00000353855 BRPF3Q9ULD4 1205 aa18.62■□□□□ 0.57
DNMT3B-204ENST00000353855 ATAD2BQ9ULI0 1458 aa18.61■□□□□ 0.57
DNMT3B-204ENST00000353855 USP35Q9P2H5 1018 aa18.61■□□□□ 0.57
DNMT3B-204ENST00000353855 ZBED9Q6R2W3 1325 aa18.61■□□□□ 0.57
DNMT3B-204ENST00000353855 EXOC6Q8TAG9 804 aa18.6■□□□□ 0.57
DNMT3B-204ENST00000353855 CARD11Q9BXL7 1154 aa18.6■□□□□ 0.57
DNMT3B-204ENST00000353855 SLKQ9H2G2 1235 aaPredicted RBP18.59■□□□□ 0.57
DNMT3B-204ENST00000353855 SPRYD3Q8NCJ5 442 aa18.58■□□□□ 0.57
DNMT3B-204ENST00000353855 L3MBTL2Q969R5 705 aa18.58■□□□□ 0.56
DNMT3B-204ENST00000353855 CCDC184Q52MB2 194 aa18.56■□□□□ 0.56
DNMT3B-204ENST00000353855 GZF1Q9H116 711 aaPredicted RBP18.56■□□□□ 0.56
DNMT3B-204ENST00000353855 CC2D1BQ5T0F9 858 aaKnown RBP18.55■□□□□ 0.56
DNMT3B-204ENST00000353855 FHAD1B1AJZ9 1412 aa18.54■□□□□ 0.56
DNMT3B-204ENST00000353855 PLIN1O60240 522 aa18.53■□□□□ 0.56
DNMT3B-204ENST00000353855 RGL3Q3MIN7 710 aa18.53■□□□□ 0.56
DNMT3B-204ENST00000353855 PNNQ9H307 717 aaKnown RBP18.51■□□□□ 0.55
DNMT3B-204ENST00000353855 VSIG10Q8N0Z9 540 aa18.5■□□□□ 0.55
DNMT3B-204ENST00000353855 KIF21BO75037 1637 aa18.49■□□□□ 0.55
DNMT3B-204ENST00000353855 WASHC2AQ641Q2 1341 aa18.48■□□□□ 0.55
DNMT3B-204ENST00000353855 ARHGAP35Q9NRY4 1499 aa18.48■□□□□ 0.55
DNMT3B-204ENST00000353855 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.48■□□□□ 0.55
DNMT3B-204ENST00000353855 MPHOSPH9Q99550 1183 aa18.47■□□□□ 0.55
DNMT3B-204ENST00000353855 L1TD1Q5T7N2 865 aaKnown RBP18.46■□□□□ 0.55
DNMT3B-204ENST00000353855 RSPH6AQ9H0K4 717 aa18.46■□□□□ 0.55
DNMT3B-204ENST00000353855 NFKBIBQ15653 356 aa18.46■□□□□ 0.55
DNMT3B-204ENST00000353855 WDR97A6NE52 1622 aa18.45■□□□□ 0.54
DNMT3B-204ENST00000353855 RRP1P56182 461 aaKnown RBP18.44■□□□□ 0.54
DNMT3B-204ENST00000353855 FRAT1Q92837 279 aaPredicted RBP18.44■□□□□ 0.54
DNMT3B-204ENST00000353855 NEUROD2Q15784 382 aa18.43■□□□□ 0.54
DNMT3B-204ENST00000353855 AKNAQ7Z591 1439 aa18.43■□□□□ 0.54
DNMT3B-204ENST00000353855 SYNJ1O43426 1573 aa18.4■□□□□ 0.54
DNMT3B-204ENST00000353855 NCLP19338 710 aaKnown RBP18.4■□□□□ 0.54
DNMT3B-204ENST00000353855 ARID3AQ99856 593 aa18.39■□□□□ 0.54
DNMT3B-204ENST00000353855 HSP90AA2PQ14568 343 aaPredicted RBP18.38■□□□□ 0.53
DNMT3B-204ENST00000353855 CRBNQ96SW2 442 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms