RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 WDR43Q15061 677 aaKnown RBP eCLIP21.52■■□□□ 1.03
PTPN11-201ENST00000351677 TNIKQ9UKE5 1360 aa21.5■■□□□ 1.03
PTPN11-201ENST00000351677 BAZ1BQ9UIG0 1483 aaKnown RBP21.48■■□□□ 1.03
PTPN11-201ENST00000351677 NACADO15069 1562 aa21.46■■□□□ 1.03
PTPN11-201ENST00000351677 HSP90AA1P07900 732 aaKnown RBP21.46■■□□□ 1.03
PTPN11-201ENST00000351677 UPF2Q9HAU5 1272 aaKnown RBP21.46■■□□□ 1.03
PTPN11-201ENST00000351677 NBR1Q14596 966 aa21.45■■□□□ 1.02
PTPN11-201ENST00000351677 CEP164Q9UPV0 1460 aa21.44■■□□□ 1.02
PTPN11-201ENST00000351677 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.42■■□□□ 1.02
PTPN11-201ENST00000351677 SENP3-EIF4A1A0A087X0R7 540 aa21.42■■□□□ 1.02
PTPN11-201ENST00000351677 KIF27Q86VH2 1401 aa21.42■■□□□ 1.02
PTPN11-201ENST00000351677 SENP3Q9H4L4 574 aaPredicted RBP21.41■■□□□ 1.02
PTPN11-201ENST00000351677 KCNH8Q96L42 1107 aa21.4■■□□□ 1.02
PTPN11-201ENST00000351677 CECR2Q9BXF3 1484 aa21.38■■□□□ 1.01
PTPN11-201ENST00000351677 RGL3Q3MIN7 710 aa21.38■■□□□ 1.01
PTPN11-201ENST00000351677 SIN3AQ96ST3 1273 aa21.36■■□□□ 1.01
PTPN11-201ENST00000351677 PLEKHD1A6NEE1 506 aa21.35■■□□□ 1.01
PTPN11-201ENST00000351677 BAZ1AQ9NRL2 1556 aaPredicted RBP21.3■■□□□ 1
PTPN11-201ENST00000351677 CFDP1Q9UEE9 299 aaPredicted RBP21.3■■□□□ 1
PTPN11-201ENST00000351677 SOGA1O94964 1423 aa21.29■■□□□ 1
PTPN11-201ENST00000351677 ANP32BQ92688 251 aaKnown RBP21.28■■□□□ 1
PTPN11-201ENST00000351677 EIF5BO60841 1220 aaKnown RBP21.26■□□□□ 0.99
PTPN11-201ENST00000351677 SUPT16HQ9Y5B9 1047 aaKnown RBP21.26■□□□□ 0.99
PTPN11-201ENST00000351677 ARXQ96QS3 562 aa21.25■□□□□ 0.99
PTPN11-201ENST00000351677 CARD11Q9BXL7 1154 aa21.21■□□□□ 0.99
PTPN11-201ENST00000351677 CCNB3Q8WWL7 1395 aa21.18■□□□□ 0.98
PTPN11-201ENST00000351677 KNSTRNQ9Y448 316 aa21.13■□□□□ 0.97
PTPN11-201ENST00000351677 ABCC8Q09428 1581 aa21.12■□□□□ 0.97
PTPN11-201ENST00000351677 PLEKHG5O94827 1062 aa21.11■□□□□ 0.97
PTPN11-201ENST00000351677 PPP1R15AO75807 674 aaPredicted RBP21.11■□□□□ 0.97
PTPN11-201ENST00000351677 MYH16Q9H6N6 1097 aa21.1■□□□□ 0.97
PTPN11-201ENST00000351677 CARMIL1Q5VZK9 1371 aa21.1■□□□□ 0.97
PTPN11-201ENST00000351677 MROH2BQ7Z745 1585 aa21.1■□□□□ 0.97
PTPN11-201ENST00000351677 CUX2O14529 1486 aa21.1■□□□□ 0.97
PTPN11-201ENST00000351677 ZBTB7CA1YPR0 619 aa21.07■□□□□ 0.96
PTPN11-201ENST00000351677 FHAD1B1AJZ9 1412 aa21.07■□□□□ 0.96
PTPN11-201ENST00000351677 CCDC88BA6NC98 1476 aa21.06■□□□□ 0.96
PTPN11-201ENST00000351677 CDCA8Q53HL2 280 aa21.05■□□□□ 0.96
PTPN11-201ENST00000351677 KANK4Q5T7N3 995 aaPredicted RBP21.04■□□□□ 0.96
PTPN11-201ENST00000351677 EIF4G1Q04637 1599 aaKnown RBP21.04■□□□□ 0.96
PTPN11-201ENST00000351677 NEUROD2Q15784 382 aa21.04■□□□□ 0.96
PTPN11-201ENST00000351677 C14orf37Q86TY3 774 aa21.04■□□□□ 0.96
PTPN11-201ENST00000351677 CFAP53Q96M91 514 aa21.03■□□□□ 0.96
PTPN11-201ENST00000351677 PPM1GO15355 546 aaPredicted RBP21.02■□□□□ 0.96
PTPN11-201ENST00000351677 CC2D1BQ5T0F9 858 aaKnown RBP21.02■□□□□ 0.96
PTPN11-201ENST00000351677 DDRGK1Q96HY6 314 aa21.01■□□□□ 0.95
PTPN11-201ENST00000351677 VPS8Q8N3P4 1428 aa21.01■□□□□ 0.95
PTPN11-201ENST00000351677 PPP4R2Q9NY27 417 aa20.98■□□□□ 0.95
PTPN11-201ENST00000351677 BECN1Q14457 450 aa20.97■□□□□ 0.95
PTPN11-201ENST00000351677 TNNT2P45379 298 aaPredicted RBP20.97■□□□□ 0.95
PTPN11-201ENST00000351677 DCAF11Q8TEB1 546 aa20.97■□□□□ 0.95
PTPN11-201ENST00000351677 ERCC6Q03468 1493 aa20.96■□□□□ 0.95
PTPN11-201ENST00000351677 SETD5Q9C0A6 1442 aa20.96■□□□□ 0.95
PTPN11-201ENST00000351677 B4GALNT3Q6L9W6 998 aa20.94■□□□□ 0.94
PTPN11-201ENST00000351677 ANP32EQ9BTT0 268 aa20.93■□□□□ 0.94
PTPN11-201ENST00000351677 FTSJ3Q8IY81 847 aaKnown RBP20.92■□□□□ 0.94
PTPN11-201ENST00000351677 FOXD1Q16676 465 aa20.92■□□□□ 0.94
PTPN11-201ENST00000351677 LAS1LQ9Y4W2 734 aaKnown RBP20.92■□□□□ 0.94
PTPN11-201ENST00000351677 A0A0G2JS52 829 aa20.91■□□□□ 0.94
PTPN11-201ENST00000351677 ARHGAP35Q9NRY4 1499 aa20.9■□□□□ 0.94
PTPN11-201ENST00000351677 HSPA5P11021 654 aaKnown RBP20.9■□□□□ 0.94
PTPN11-201ENST00000351677 RGS3P49796 1198 aa20.9■□□□□ 0.94
PTPN11-201ENST00000351677 FRAT1Q92837 279 aaPredicted RBP20.89■□□□□ 0.94
PTPN11-201ENST00000351677 ARID4BQ4LE39 1312 aaPredicted RBP20.89■□□□□ 0.93
PTPN11-201ENST00000351677 TIMELESSQ9UNS1 1208 aa20.88■□□□□ 0.93
PTPN11-201ENST00000351677 MAPK8IP3Q9UPT6 1336 aa20.87■□□□□ 0.93
PTPN11-201ENST00000351677 POGKQ9P215 609 aa20.86■□□□□ 0.93
PTPN11-201ENST00000351677 WIZO95785 1651 aa20.85■□□□□ 0.93
PTPN11-201ENST00000351677 TMF1P82094 1093 aa20.84■□□□□ 0.93
PTPN11-201ENST00000351677 RAB3GAP2Q9H2M9 1393 aa20.84■□□□□ 0.93
PTPN11-201ENST00000351677 CCER2I3L3R5 266 aa20.83■□□□□ 0.92
PTPN11-201ENST00000351677 NUDCQ9Y266 331 aa20.82■□□□□ 0.92
PTPN11-201ENST00000351677 U2SURPO15042 1029 aaKnown RBP20.81■□□□□ 0.92
PTPN11-201ENST00000351677 PKD2Q13563 968 aa20.81■□□□□ 0.92
PTPN11-201ENST00000351677 NCLP19338 710 aaKnown RBP20.77■□□□□ 0.92
PTPN11-201ENST00000351677 NOP58Q9Y2X3 529 aaKnown RBP20.77■□□□□ 0.91
PTPN11-201ENST00000351677 GOLGA6L22H0YM25 854 aa20.76■□□□□ 0.91
PTPN11-201ENST00000351677 TDRD9Q8NDG6 1382 aaKnown RBP20.75■□□□□ 0.91
PTPN11-201ENST00000351677 SMARCA2P51531 1590 aa20.75■□□□□ 0.91
PTPN11-201ENST00000351677 MPHOSPH9Q99550 1183 aa20.74■□□□□ 0.91
PTPN11-201ENST00000351677 TRIM44Q96DX7 344 aaPredicted RBP20.74■□□□□ 0.91
PTPN11-201ENST00000351677 TOP2AP11388 1531 aaKnown RBP20.73■□□□□ 0.91
PTPN11-201ENST00000351677 TPRNQ4KMQ1 711 aa20.72■□□□□ 0.91
PTPN11-201ENST00000351677 CASC1Q6TDU7 716 aa20.71■□□□□ 0.91
PTPN11-201ENST00000351677 SAFB2Q14151 953 aaKnown RBP eCLIP20.71■□□□□ 0.91
PTPN11-201ENST00000351677 KANK1Q14678 1352 aa20.71■□□□□ 0.91
PTPN11-201ENST00000351677 GLIPR1L2Q4G1C9 344 aa20.71■□□□□ 0.91
PTPN11-201ENST00000351677 LMOD2Q6P5Q4 547 aa20.68■□□□□ 0.9
PTPN11-201ENST00000351677 FMN1Q68DA7 1419 aa20.67■□□□□ 0.9
PTPN11-201ENST00000351677 MORC1Q86VD1 984 aa20.67■□□□□ 0.9
PTPN11-201ENST00000351677 SRPK2P78362 688 aaKnown RBP20.67■□□□□ 0.9
PTPN11-201ENST00000351677 HAP1P54257 671 aaPredicted RBP20.66■□□□□ 0.9
PTPN11-201ENST00000351677 RAPGEF2Q9Y4G8 1499 aa20.66■□□□□ 0.9
PTPN11-201ENST00000351677 RBM19Q9Y4C8 960 aaKnown RBP20.65■□□□□ 0.9
PTPN11-201ENST00000351677 KTN1Q86UP2 1357 aaKnown RBP20.64■□□□□ 0.89
PTPN11-201ENST00000351677 FHOD3Q2V2M9 1422 aa20.64■□□□□ 0.89
PTPN11-201ENST00000351677 NUP155O75694 1391 aa20.64■□□□□ 0.89
PTPN11-201ENST00000351677 MLECQ14165 292 aa20.64■□□□□ 0.89
PTPN11-201ENST00000351677 GGT6Q6P531 493 aa20.63■□□□□ 0.89
PTPN11-201ENST00000351677 ROCK2O75116 1388 aaKnown RBP20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms