RNA–Protein interactions for RNA: ENST00000344683.9

MCPH1-201, Transcript of microcephalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MCPH1, Length 8,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-201ENST00000344683 CALRP27797 417 aaKnown RBP10.85□□□□□ -0.67
MCPH1-201ENST00000344683 DDX10Q13206 875 aaKnown RBP10.84□□□□□ -0.67
MCPH1-201ENST00000344683 DEKP35659 375 aaKnown RBP10.83□□□□□ -0.68
MCPH1-201ENST00000344683 SETQ01105 290 aaPredicted RBP10.82□□□□□ -0.68
MCPH1-201ENST00000344683 MRS2Q9HD23 443 aa10.82□□□□□ -0.68
MCPH1-201ENST00000344683 HSP90AB1P08238 724 aaKnown RBP10.81□□□□□ -0.68
MCPH1-201ENST00000344683 GOLGA6L1Q8N7Z2 621 aa10.8□□□□□ -0.68
MCPH1-201ENST00000344683 SALL2Q9Y467 1007 aaPredicted RBP10.79□□□□□ -0.68
MCPH1-201ENST00000344683 PLCB2Q00722 1185 aa10.79□□□□□ -0.68
MCPH1-201ENST00000344683 CFAP44Q96MT7 982 aa10.78□□□□□ -0.68
MCPH1-201ENST00000344683 CHMP4BQ9H444 224 aaKnown RBP10.78□□□□□ -0.68
MCPH1-201ENST00000344683 DRC7Q8IY82 874 aa10.78□□□□□ -0.68
MCPH1-201ENST00000344683 KIAA2012Q0VF49 1180 aa10.78□□□□□ -0.68
MCPH1-201ENST00000344683 LAS1LQ9Y4W2 734 aaKnown RBP10.77□□□□□ -0.69
MCPH1-201ENST00000344683 PPP4R2Q9NY27 417 aa10.76□□□□□ -0.69
MCPH1-201ENST00000344683 IRX6P78412 446 aaPredicted RBP10.76□□□□□ -0.69
MCPH1-201ENST00000344683 HSCBQ8IWL3 235 aa10.75□□□□□ -0.69
MCPH1-201ENST00000344683 RSPH6AQ9H0K4 717 aa10.75□□□□□ -0.69
MCPH1-201ENST00000344683 PNNQ9H307 717 aaKnown RBP10.75□□□□□ -0.69
MCPH1-201ENST00000344683 FTSJ3Q8IY81 847 aaKnown RBP10.74□□□□□ -0.69
MCPH1-201ENST00000344683 ARID4BQ4LE39 1312 aaPredicted RBP10.74□□□□□ -0.69
MCPH1-201ENST00000344683 GOLGA6L4A6NEF3 574 aa10.73□□□□□ -0.69
MCPH1-201ENST00000344683 NOC3LQ8WTT2 800 aaKnown RBP10.73□□□□□ -0.69
MCPH1-201ENST00000344683 HSP90AA2PQ14568 343 aaPredicted RBP10.72□□□□□ -0.69
MCPH1-201ENST00000344683 PABPN1Q86U42 306 aaKnown RBP eCLIP10.71□□□□□ -0.69
MCPH1-201ENST00000344683 MIER1Q8N108 512 aa10.71□□□□□ -0.69
MCPH1-201ENST00000344683 MS4A1P11836 297 aa10.71□□□□□ -0.69
MCPH1-201ENST00000344683 SYAP1Q96A49 352 aaPredicted RBP10.7□□□□□ -0.7
MCPH1-201ENST00000344683 GBP4Q96PP9 640 aa10.7□□□□□ -0.7
MCPH1-201ENST00000344683 MCCP23508 829 aa10.69□□□□□ -0.7
MCPH1-201ENST00000344683 TPRNQ4KMQ1 711 aa10.67□□□□□ -0.7
MCPH1-201ENST00000344683 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.67□□□□□ -0.7
MCPH1-201ENST00000344683 STAG3Q9UJ98 1225 aa10.67□□□□□ -0.7
MCPH1-201ENST00000344683 TPM4P67936 248 aa10.66□□□□□ -0.7
MCPH1-201ENST00000344683 SUPT16HQ9Y5B9 1047 aaKnown RBP10.66□□□□□ -0.7
MCPH1-201ENST00000344683 ESF1Q9H501 851 aaKnown RBP10.66□□□□□ -0.7
MCPH1-201ENST00000344683 EIF4G2P78344 907 aaKnown RBP eCLIP10.66□□□□□ -0.7
MCPH1-201ENST00000344683 FGD1P98174 961 aa10.64□□□□□ -0.71
MCPH1-201ENST00000344683 A0A0U1RQG5 324 aaPredicted RBP10.64□□□□□ -0.71
MCPH1-201ENST00000344683 GOLGA6L3A6NEY3 463 aa10.64□□□□□ -0.71
MCPH1-201ENST00000344683 CFAP53Q96M91 514 aa10.63□□□□□ -0.71
MCPH1-201ENST00000344683 HTATSF1O43719 755 aaKnown RBP10.63□□□□□ -0.71
MCPH1-201ENST00000344683 PHF14O94880 888 aa10.62□□□□□ -0.71
MCPH1-201ENST00000344683 TULP1O00294 542 aaPredicted RBP10.62□□□□□ -0.71
MCPH1-201ENST00000344683 CDCA8Q53HL2 280 aa10.61□□□□□ -0.71
MCPH1-201ENST00000344683 CSPP1Q1MSJ5 1256 aa10.61□□□□□ -0.71
MCPH1-201ENST00000344683 KCNJ4P48050 445 aa10.6□□□□□ -0.71
MCPH1-201ENST00000344683 GPS2Q13227 327 aa10.6□□□□□ -0.71
MCPH1-201ENST00000344683 ZNF777Q9ULD5 760 aaPredicted RBP10.6□□□□□ -0.71
MCPH1-201ENST00000344683 NOM1Q5C9Z4 860 aaKnown RBP10.58□□□□□ -0.72
MCPH1-201ENST00000344683 CHGAP10645 457 aaKnown RBP10.58□□□□□ -0.72
MCPH1-201ENST00000344683 RBM19Q9Y4C8 960 aaKnown RBP10.58□□□□□ -0.72
MCPH1-201ENST00000344683 ZCCHC6Q5VYS8 1495 aaKnown RBP10.58□□□□□ -0.72
MCPH1-201ENST00000344683 RGS3P49796 1198 aa10.57□□□□□ -0.72
MCPH1-201ENST00000344683 CCDC34Q96HJ3 373 aa10.57□□□□□ -0.72
MCPH1-201ENST00000344683 ARID3AQ99856 593 aa10.57□□□□□ -0.72
MCPH1-201ENST00000344683 TEX35Q5T0J7 233 aa10.57□□□□□ -0.72
MCPH1-201ENST00000344683 VSIG10Q8N0Z9 540 aa10.56□□□□□ -0.72
MCPH1-201ENST00000344683 GNL2Q13823 731 aaKnown RBP10.56□□□□□ -0.72
MCPH1-201ENST00000344683 APPP05067 770 aa10.55□□□□□ -0.72
MCPH1-201ENST00000344683 ZNF771Q7L3S4 317 aaPredicted RBP10.55□□□□□ -0.72
MCPH1-201ENST00000344683 CSRNP3Q8WYN3 585 aa10.54□□□□□ -0.72
MCPH1-201ENST00000344683 NAP1L2Q9ULW6 460 aaPredicted RBP10.54□□□□□ -0.72
MCPH1-201ENST00000344683 KNSTRNQ9Y448 316 aa10.54□□□□□ -0.72
MCPH1-201ENST00000344683 OS9Q13438 667 aaPredicted RBP10.53□□□□□ -0.72
MCPH1-201ENST00000344683 CCDC70Q6NSX1 233 aa10.53□□□□□ -0.72
MCPH1-201ENST00000344683 MAPK8IP3Q9UPT6 1336 aa10.52□□□□□ -0.73
MCPH1-201ENST00000344683 CLSTN1O94985 981 aa10.51□□□□□ -0.73
MCPH1-201ENST00000344683 DDX11L8A8MPP1 907 aa10.5□□□□□ -0.73
MCPH1-201ENST00000344683 MTERF4Q7Z6M4 381 aaKnown RBP10.5□□□□□ -0.73
MCPH1-201ENST00000344683 TPM3P06753 285 aa10.5□□□□□ -0.73
MCPH1-201ENST00000344683 TCERG1O14776 1098 aaKnown RBP10.5□□□□□ -0.73
MCPH1-201ENST00000344683 RRP12Q5JTH9 1297 aaKnown RBP10.5□□□□□ -0.73
MCPH1-201ENST00000344683 EEA1Q15075 1411 aa10.5□□□□□ -0.73
MCPH1-201ENST00000344683 CALD1Q05682 793 aaKnown RBP10.49□□□□□ -0.73
MCPH1-201ENST00000344683 B4GALNT3Q6L9W6 998 aa10.49□□□□□ -0.73
MCPH1-201ENST00000344683 KIAA1211Q6ZU35 1233 aa10.49□□□□□ -0.73
MCPH1-201ENST00000344683 NUDCQ9Y266 331 aa10.49□□□□□ -0.73
MCPH1-201ENST00000344683 KDM2AQ9Y2K7 1162 aa10.49□□□□□ -0.73
MCPH1-201ENST00000344683 IPO9Q96P70 1041 aaKnown RBP10.49□□□□□ -0.73
MCPH1-201ENST00000344683 GOLGA2Q08379 1002 aa10.49□□□□□ -0.73
MCPH1-201ENST00000344683 GZF1Q9H116 711 aaPredicted RBP10.49□□□□□ -0.73
MCPH1-201ENST00000344683 P3H3Q8IVL6 736 aa10.48□□□□□ -0.73
MCPH1-201ENST00000344683 FBLN2P98095 1184 aa10.48□□□□□ -0.73
MCPH1-201ENST00000344683 SPRYD3Q8NCJ5 442 aa10.47□□□□□ -0.73
MCPH1-201ENST00000344683 HAP1P54257 671 aaPredicted RBP10.46□□□□□ -0.73
MCPH1-201ENST00000344683 FRAT1Q92837 279 aaPredicted RBP10.46□□□□□ -0.73
MCPH1-201ENST00000344683 MAP7D2Q96T17 732 aa10.46□□□□□ -0.73
MCPH1-201ENST00000344683 ZBTB7CA1YPR0 619 aa10.46□□□□□ -0.73
MCPH1-201ENST00000344683 SKOR2Q2VWA4 1001 aaPredicted RBP10.46□□□□□ -0.73
MCPH1-201ENST00000344683 CWC15Q9P013 229 aaKnown RBP10.46□□□□□ -0.74
MCPH1-201ENST00000344683 CEP89Q96ST8 783 aa10.45□□□□□ -0.74
MCPH1-201ENST00000344683 TAOK2Q9UL54 1235 aa10.44□□□□□ -0.74
MCPH1-201ENST00000344683 TSPY4P0CV99 314 aa10.44□□□□□ -0.74
MCPH1-201ENST00000344683 TSPY10P0CW01 314 aa10.44□□□□□ -0.74
MCPH1-201ENST00000344683 TSR1Q2NL82 804 aaKnown RBP10.44□□□□□ -0.74
MCPH1-201ENST00000344683 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.44□□□□□ -0.74
MCPH1-201ENST00000344683 HMMRO75330 724 aa10.43□□□□□ -0.74
MCPH1-201ENST00000344683 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.43□□□□□ -0.74
MCPH1-201ENST00000344683 CCER2I3L3R5 266 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms