RNA–Protein interactions for RNA: ENST00000343003.10

SPATA13-201, Transcript of spermatogenesis associated 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPATA13, Length 6,405 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA13-201ENST00000343003 MYO15BQ96JP2 1530 aa12.36□□□□□ -0.43
SPATA13-201ENST00000343003 TNIKQ9UKE5 1360 aa12.36□□□□□ -0.43
SPATA13-201ENST00000343003 EIF4G2P78344 907 aaKnown RBP eCLIP12.36□□□□□ -0.43
SPATA13-201ENST00000343003 MRS2Q9HD23 443 aa12.35□□□□□ -0.43
SPATA13-201ENST00000343003 ERCC6Q03468 1493 aa12.35□□□□□ -0.43
SPATA13-201ENST00000343003 SALL2Q9Y467 1007 aaPredicted RBP12.35□□□□□ -0.43
SPATA13-201ENST00000343003 HSP90AA1P07900 732 aaKnown RBP12.34□□□□□ -0.43
SPATA13-201ENST00000343003 KCNH8Q96L42 1107 aa12.34□□□□□ -0.43
SPATA13-201ENST00000343003 ANP32BQ92688 251 aaKnown RBP12.31□□□□□ -0.44
SPATA13-201ENST00000343003 CCDC136Q96JN2 1154 aa12.31□□□□□ -0.44
SPATA13-201ENST00000343003 PPP1R15AO75807 674 aaPredicted RBP12.3□□□□□ -0.44
SPATA13-201ENST00000343003 CFDP1Q9UEE9 299 aaPredicted RBP12.29□□□□□ -0.44
SPATA13-201ENST00000343003 MYH16Q9H6N6 1097 aa12.26□□□□□ -0.45
SPATA13-201ENST00000343003 CDCA8Q53HL2 280 aa12.25□□□□□ -0.45
SPATA13-201ENST00000343003 SCAF1Q9H7N4 1312 aaKnown RBP12.25□□□□□ -0.45
SPATA13-201ENST00000343003 FHAD1B1AJZ9 1412 aa12.25□□□□□ -0.45
SPATA13-201ENST00000343003 EIF4G1Q04637 1599 aaKnown RBP12.24□□□□□ -0.45
SPATA13-201ENST00000343003 HIRIP3Q9BW71 556 aaPredicted RBP12.24□□□□□ -0.45
SPATA13-201ENST00000343003 MIER1Q8N108 512 aa12.23□□□□□ -0.45
SPATA13-201ENST00000343003 CECR2Q9BXF3 1484 aa12.23□□□□□ -0.45
SPATA13-201ENST00000343003 RGL3Q3MIN7 710 aa12.21□□□□□ -0.45
SPATA13-201ENST00000343003 CFAP53Q96M91 514 aa12.21□□□□□ -0.45
SPATA13-201ENST00000343003 SMARCA2P51531 1590 aa12.21□□□□□ -0.45
SPATA13-201ENST00000343003 CUX2O14529 1486 aa12.2□□□□□ -0.46
SPATA13-201ENST00000343003 CCNB3Q8WWL7 1395 aa12.2□□□□□ -0.46
SPATA13-201ENST00000343003 ARID4BQ4LE39 1312 aaPredicted RBP12.19□□□□□ -0.46
SPATA13-201ENST00000343003 ZBTB7CA1YPR0 619 aa12.19□□□□□ -0.46
SPATA13-201ENST00000343003 C14orf37Q86TY3 774 aa12.19□□□□□ -0.46
SPATA13-201ENST00000343003 CARMIL1Q5VZK9 1371 aa12.19□□□□□ -0.46
SPATA13-201ENST00000343003 CARD11Q9BXL7 1154 aa12.18□□□□□ -0.46
SPATA13-201ENST00000343003 KNSTRNQ9Y448 316 aa12.18□□□□□ -0.46
SPATA13-201ENST00000343003 SENP3Q9H4L4 574 aaPredicted RBP12.16□□□□□ -0.46
SPATA13-201ENST00000343003 CCDC88BA6NC98 1476 aa12.14□□□□□ -0.47
SPATA13-201ENST00000343003 KANK1Q14678 1352 aa12.14□□□□□ -0.47
SPATA13-201ENST00000343003 IRX6P78412 446 aaPredicted RBP12.14□□□□□ -0.47
SPATA13-201ENST00000343003 MROH2BQ7Z745 1585 aa12.13□□□□□ -0.47
SPATA13-201ENST00000343003 SOGA1O94964 1423 aa12.12□□□□□ -0.47
SPATA13-201ENST00000343003 A0A0G2JS52 829 aa12.12□□□□□ -0.47
SPATA13-201ENST00000343003 ARHGAP35Q9NRY4 1499 aa12.12□□□□□ -0.47
SPATA13-201ENST00000343003 DDRGK1Q96HY6 314 aa12.12□□□□□ -0.47
SPATA13-201ENST00000343003 PDS5BQ9NTI5 1447 aa12.1□□□□□ -0.47
SPATA13-201ENST00000343003 TOP2AP11388 1531 aaKnown RBP12.1□□□□□ -0.47
SPATA13-201ENST00000343003 BECN1Q14457 450 aa12.09□□□□□ -0.47
SPATA13-201ENST00000343003 POGKQ9P215 609 aa12.09□□□□□ -0.47
SPATA13-201ENST00000343003 ABCC8Q09428 1581 aa12.09□□□□□ -0.47
SPATA13-201ENST00000343003 HAP1P54257 671 aaPredicted RBP12.09□□□□□ -0.47
SPATA13-201ENST00000343003 MAPK8IP3Q9UPT6 1336 aa12.08□□□□□ -0.48
SPATA13-201ENST00000343003 PLEKHG5O94827 1062 aa12.08□□□□□ -0.48
SPATA13-201ENST00000343003 NUDCQ9Y266 331 aa12.08□□□□□ -0.48
SPATA13-201ENST00000343003 CARMIL2Q6F5E8 1435 aa12.08□□□□□ -0.48
SPATA13-201ENST00000343003 EIF5BO60841 1220 aaKnown RBP12.07□□□□□ -0.48
SPATA13-201ENST00000343003 TRHP20396 242 aaPredicted RBP12.07□□□□□ -0.48
SPATA13-201ENST00000343003 NBR1Q14596 966 aa12.07□□□□□ -0.48
SPATA13-201ENST00000343003 SIN3AQ96ST3 1273 aa12.07□□□□□ -0.48
SPATA13-201ENST00000343003 VPS8Q8N3P4 1428 aa12.07□□□□□ -0.48
SPATA13-201ENST00000343003 PPM1GO15355 546 aaPredicted RBP12.06□□□□□ -0.48
SPATA13-201ENST00000343003 FTSJ3Q8IY81 847 aaKnown RBP12.05□□□□□ -0.48
SPATA13-201ENST00000343003 SETD5Q9C0A6 1442 aa12.05□□□□□ -0.48
SPATA13-201ENST00000343003 CASC1Q6TDU7 716 aa12.05□□□□□ -0.48
SPATA13-201ENST00000343003 TMF1P82094 1093 aa12.04□□□□□ -0.48
SPATA13-201ENST00000343003 PNNQ9H307 717 aaKnown RBP12.04□□□□□ -0.48
SPATA13-201ENST00000343003 TIMELESSQ9UNS1 1208 aa12.04□□□□□ -0.48
SPATA13-201ENST00000343003 WIZO95785 1651 aa12.04□□□□□ -0.48
SPATA13-201ENST00000343003 HDGFP51858 240 aaKnown RBP12.03□□□□□ -0.48
SPATA13-201ENST00000343003 FMN1Q68DA7 1419 aa12.02□□□□□ -0.48
SPATA13-201ENST00000343003 NCLP19338 710 aaKnown RBP12.02□□□□□ -0.48
SPATA13-201ENST00000343003 DCAF11Q8TEB1 546 aa12.01□□□□□ -0.49
SPATA13-201ENST00000343003 CC2D1BQ5T0F9 858 aaKnown RBP12.01□□□□□ -0.49
SPATA13-201ENST00000343003 CHMP4BQ9H444 224 aaKnown RBP12.01□□□□□ -0.49
SPATA13-201ENST00000343003 LAS1LQ9Y4W2 734 aaKnown RBP12.01□□□□□ -0.49
SPATA13-201ENST00000343003 MS4A1P11836 297 aa11.99□□□□□ -0.49
SPATA13-201ENST00000343003 GOLGA6L22H0YM25 854 aa11.99□□□□□ -0.49
SPATA13-201ENST00000343003 ANP32EQ9BTT0 268 aa11.99□□□□□ -0.49
SPATA13-201ENST00000343003 SUPT16HQ9Y5B9 1047 aaKnown RBP11.99□□□□□ -0.49
SPATA13-201ENST00000343003 NEUROD2Q15784 382 aa11.98□□□□□ -0.49
SPATA13-201ENST00000343003 ARXQ96QS3 562 aa11.98□□□□□ -0.49
SPATA13-201ENST00000343003 TNNT2P45379 298 aaPredicted RBP11.96□□□□□ -0.5
SPATA13-201ENST00000343003 PPP4R2Q9NY27 417 aa11.96□□□□□ -0.5
SPATA13-201ENST00000343003 LMOD2Q6P5Q4 547 aa11.95□□□□□ -0.5
SPATA13-201ENST00000343003 U2SURPO15042 1029 aaKnown RBP11.95□□□□□ -0.5
SPATA13-201ENST00000343003 RAPGEF2Q9Y4G8 1499 aa11.94□□□□□ -0.5
SPATA13-201ENST00000343003 SENP3-EIF4A1A0A087X0R7 540 aa11.94□□□□□ -0.5
SPATA13-201ENST00000343003 CDK11BP21127 795 aaKnown RBP11.94□□□□□ -0.5
SPATA13-201ENST00000343003 ANKRD30AQ9BXX3 1397 aa11.94□□□□□ -0.5
SPATA13-201ENST00000343003 SMARCA4P51532 1647 aa11.93□□□□□ -0.5
SPATA13-201ENST00000343003 SRPK2P78362 688 aaKnown RBP11.93□□□□□ -0.5
SPATA13-201ENST00000343003 PKD2Q13563 968 aa11.93□□□□□ -0.5
SPATA13-201ENST00000343003 TDRD9Q8NDG6 1382 aaKnown RBP11.93□□□□□ -0.5
SPATA13-201ENST00000343003 FRAT1Q92837 279 aaPredicted RBP11.92□□□□□ -0.5
SPATA13-201ENST00000343003 CCER2I3L3R5 266 aa11.92□□□□□ -0.5
SPATA13-201ENST00000343003 CADPSQ9ULU8 1353 aa11.91□□□□□ -0.5
SPATA13-201ENST00000343003 MLECQ14165 292 aa11.91□□□□□ -0.5
SPATA13-201ENST00000343003 MORC1Q86VD1 984 aa11.91□□□□□ -0.5
SPATA13-201ENST00000343003 HSPA5P11021 654 aaKnown RBP11.91□□□□□ -0.5
SPATA13-201ENST00000343003 KANK4Q5T7N3 995 aaPredicted RBP11.91□□□□□ -0.5
SPATA13-201ENST00000343003 KTN1Q86UP2 1357 aaKnown RBP11.91□□□□□ -0.5
SPATA13-201ENST00000343003 EFCAB2Q5VUJ9 269 aa11.9□□□□□ -0.5
SPATA13-201ENST00000343003 CCDC18Q5T9S5 1454 aa11.9□□□□□ -0.51
SPATA13-201ENST00000343003 ROCK2O75116 1388 aaKnown RBP11.89□□□□□ -0.51
SPATA13-201ENST00000343003 RAB3GAP2Q9H2M9 1393 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms