RNA–Protein interactions for RNA: ENST00000342745.4

SUSD6-201, Transcript of sushi domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUSD6, Length 5,388 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD6-201ENST00000342745 SALL2Q9Y467 1007 aaPredicted RBP17.42■□□□□ 0.38
SUSD6-201ENST00000342745 L1TD1Q5T7N2 865 aaKnown RBP17.35■□□□□ 0.37
SUSD6-201ENST00000342745 CHMP4BQ9H444 224 aaKnown RBP17.35■□□□□ 0.37
SUSD6-201ENST00000342745 TSPY4P0CV99 314 aa17.33■□□□□ 0.36
SUSD6-201ENST00000342745 TSPY10P0CW01 314 aa17.33■□□□□ 0.36
SUSD6-201ENST00000342745 CFAP53Q96M91 514 aa17.33■□□□□ 0.36
SUSD6-201ENST00000342745 SCRIBQ14160 1630 aa17.31■□□□□ 0.36
SUSD6-201ENST00000342745 SCAF1Q9H7N4 1312 aaKnown RBP17.3■□□□□ 0.36
SUSD6-201ENST00000342745 CHMP7Q8WUX9 453 aaPredicted RBP17.29■□□□□ 0.36
SUSD6-201ENST00000342745 A0A0G2JS52 829 aa17.28■□□□□ 0.36
SUSD6-201ENST00000342745 CDCA8Q53HL2 280 aa17.28■□□□□ 0.36
SUSD6-201ENST00000342745 CHAF1AQ13111 956 aaPredicted RBP17.27■□□□□ 0.36
SUSD6-201ENST00000342745 NAP1L5Q96NT1 182 aaPredicted RBP17.25■□□□□ 0.35
SUSD6-201ENST00000342745 EIF4G2P78344 907 aaKnown RBP eCLIP17.24■□□□□ 0.356e-6■■■■□ 25.1
SUSD6-201ENST00000342745 MS4A1P11836 297 aa17.23■□□□□ 0.35
SUSD6-201ENST00000342745 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.23■□□□□ 0.35
SUSD6-201ENST00000342745 FTSJ3Q8IY81 847 aaKnown RBP17.2■□□□□ 0.34
SUSD6-201ENST00000342745 CFAP44Q96MT7 982 aa17.19■□□□□ 0.34
SUSD6-201ENST00000342745 PPP1R15AO75807 674 aaPredicted RBP17.18■□□□□ 0.34
SUSD6-201ENST00000342745 KDM2AQ9Y2K7 1162 aa17.17■□□□□ 0.34
SUSD6-201ENST00000342745 C14orf37Q86TY3 774 aa17.16■□□□□ 0.34
SUSD6-201ENST00000342745 FGD1P98174 961 aa17.15■□□□□ 0.34
SUSD6-201ENST00000342745 GOLGA6L4A6NEF3 574 aa17.15■□□□□ 0.34
SUSD6-201ENST00000342745 PLCB2Q00722 1185 aa17.14■□□□□ 0.33
SUSD6-201ENST00000342745 NUDCQ9Y266 331 aa17.14■□□□□ 0.33
SUSD6-201ENST00000342745 ZBTB7CA1YPR0 619 aa17.13■□□□□ 0.33
SUSD6-201ENST00000342745 HAP1P54257 671 aaPredicted RBP17.13■□□□□ 0.33
SUSD6-201ENST00000342745 TULP1O00294 542 aaPredicted RBP17.12■□□□□ 0.33
SUSD6-201ENST00000342745 MAPK8IP3Q9UPT6 1336 aa17.11■□□□□ 0.33
SUSD6-201ENST00000342745 HSP90AB1P08238 724 aaKnown RBP17.11■□□□□ 0.33
SUSD6-201ENST00000342745 CHIC2Q9UKJ5 165 aa17.11■□□□□ 0.33
SUSD6-201ENST00000342745 PNNQ9H307 717 aaKnown RBP17.11■□□□□ 0.33
SUSD6-201ENST00000342745 KNSTRNQ9Y448 316 aa17.1■□□□□ 0.33
SUSD6-201ENST00000342745 MSNP26038 577 aaKnown RBP17.09■□□□□ 0.33
SUSD6-201ENST00000342745 MTUS2Q5JR59 1369 aa17.09■□□□□ 0.33
SUSD6-201ENST00000342745 PTMSP20962 102 aa17.08■□□□□ 0.33
SUSD6-201ENST00000342745 IRX6P78412 446 aaPredicted RBP17.08■□□□□ 0.33
SUSD6-201ENST00000342745 KCNJ4P48050 445 aa17.07■□□□□ 0.32
SUSD6-201ENST00000342745 MCCP23508 829 aa17.07■□□□□ 0.32
SUSD6-201ENST00000342745 KIAA2012Q0VF49 1180 aa17.06■□□□□ 0.32
SUSD6-201ENST00000342745 OS9Q13438 667 aaPredicted RBP17.05■□□□□ 0.32
SUSD6-201ENST00000342745 DCAF1Q9Y4B6 1507 aa17.05■□□□□ 0.32
SUSD6-201ENST00000342745 GOLGA2Q08379 1002 aa17.04■□□□□ 0.32
SUSD6-201ENST00000342745 HSCBQ8IWL3 235 aa17.04■□□□□ 0.32
SUSD6-201ENST00000342745 PPP4R2Q9NY27 417 aa17.03■□□□□ 0.32
SUSD6-201ENST00000342745 ARID4BQ4LE39 1312 aaPredicted RBP17.03■□□□□ 0.32
SUSD6-201ENST00000342745 NPHP1O15259 732 aa17.03■□□□□ 0.32
SUSD6-201ENST00000342745 USP35Q9P2H5 1018 aa17.03■□□□□ 0.32
SUSD6-201ENST00000342745 NOP58Q9Y2X3 529 aaKnown RBP17.02■□□□□ 0.32
SUSD6-201ENST00000342745 RB1CC1Q8TDY2 1594 aa17■□□□□ 0.31
SUSD6-201ENST00000342745 TPRNQ4KMQ1 711 aa17■□□□□ 0.31
SUSD6-201ENST00000342745 DRC7Q8IY82 874 aa16.98■□□□□ 0.31
SUSD6-201ENST00000342745 KCNH8Q96L42 1107 aa16.98■□□□□ 0.31
SUSD6-201ENST00000342745 RSF1Q96T23 1441 aaPredicted RBP16.98■□□□□ 0.31
SUSD6-201ENST00000342745 HTATSF1O43719 755 aaKnown RBP16.97■□□□□ 0.31
SUSD6-201ENST00000342745 TRHP20396 242 aaPredicted RBP16.97■□□□□ 0.31
SUSD6-201ENST00000342745 MIER1Q8N108 512 aa16.97■□□□□ 0.31
SUSD6-201ENST00000342745 ERCC6Q03468 1493 aa16.97■□□□□ 0.31
SUSD6-201ENST00000342745 NAP1L2Q9ULW6 460 aaPredicted RBP16.96■□□□□ 0.31
SUSD6-201ENST00000342745 CLSTN1O94985 981 aa16.96■□□□□ 0.3
SUSD6-201ENST00000342745 CCDC34Q96HJ3 373 aa16.93■□□□□ 0.3
SUSD6-201ENST00000342745 NOC3LQ8WTT2 800 aaKnown RBP16.92■□□□□ 0.3
SUSD6-201ENST00000342745 RGS3P49796 1198 aa16.92■□□□□ 0.3
SUSD6-201ENST00000342745 LAS1LQ9Y4W2 734 aaKnown RBP16.92■□□□□ 0.3
SUSD6-201ENST00000342745 PLEKHD1A6NEE1 506 aa16.91■□□□□ 0.3
SUSD6-201ENST00000342745 GNL2Q13823 731 aaKnown RBP16.9■□□□□ 0.3
SUSD6-201ENST00000342745 TNNT3P45378 269 aaPredicted RBP16.9■□□□□ 0.3
SUSD6-201ENST00000342745 TPM4P67936 248 aa16.9■□□□□ 0.3
SUSD6-201ENST00000342745 SYAP1Q96A49 352 aaPredicted RBP16.89■□□□□ 0.29
SUSD6-201ENST00000342745 GOLGA6L1Q8N7Z2 621 aa16.89■□□□□ 0.29
SUSD6-201ENST00000342745 GBP4Q96PP9 640 aa16.89■□□□□ 0.29
SUSD6-201ENST00000342745 FRAT1Q92837 279 aaPredicted RBP16.88■□□□□ 0.29
SUSD6-201ENST00000342745 SUPT16HQ9Y5B9 1047 aaKnown RBP16.88■□□□□ 0.29
SUSD6-201ENST00000342745 CARD11Q9BXL7 1154 aa16.87■□□□□ 0.29
SUSD6-201ENST00000342745 CHMP4AQ9BY43 222 aa16.87■□□□□ 0.29
SUSD6-201ENST00000342745 PLEKHG5O94827 1062 aa16.86■□□□□ 0.29
SUSD6-201ENST00000342745 POGKQ9P215 609 aa16.86■□□□□ 0.29
SUSD6-201ENST00000342745 TAOK2Q9UL54 1235 aa16.84■□□□□ 0.29
SUSD6-201ENST00000342745 NEUROD2Q15784 382 aa16.84■□□□□ 0.29
SUSD6-201ENST00000342745 KIAA1211Q6ZU35 1233 aa16.84■□□□□ 0.29
SUSD6-201ENST00000342745 RTN4Q9NQC3 1192 aaKnown RBP16.82■□□□□ 0.28
SUSD6-201ENST00000342745 RRP7BPQ9NSQ0 103 aa16.82■□□□□ 0.28
SUSD6-201ENST00000342745 RGL3Q3MIN7 710 aa16.81■□□□□ 0.28
SUSD6-201ENST00000342745 NCBP3Q53F19 620 aaKnown RBP16.81■□□□□ 0.28
SUSD6-201ENST00000342745 HDGFP51858 240 aaKnown RBP16.81■□□□□ 0.28
SUSD6-201ENST00000342745 IPO8O15397 1037 aaKnown RBP16.8■□□□□ 0.28
SUSD6-201ENST00000342745 CSPP1Q1MSJ5 1256 aa16.8■□□□□ 0.28
SUSD6-201ENST00000342745 A0A0U1RQG5 324 aaPredicted RBP16.79■□□□□ 0.28
SUSD6-201ENST00000342745 HIRIP3Q9BW71 556 aaPredicted RBP16.78■□□□□ 0.28
SUSD6-201ENST00000342745 ISY1Q9ULR0 285 aaKnown RBP16.78■□□□□ 0.28
SUSD6-201ENST00000342745 HDAC5Q9UQL6 1122 aa16.78■□□□□ 0.28
SUSD6-201ENST00000342745 CLIP1P30622 1438 aa16.78■□□□□ 0.28
SUSD6-201ENST00000342745 LMOD2Q6P5Q4 547 aa16.77■□□□□ 0.27
SUSD6-201ENST00000342745 U2SURPO15042 1029 aaKnown RBP16.77■□□□□ 0.27
SUSD6-201ENST00000342745 CALD1Q05682 793 aaKnown RBP16.77■□□□□ 0.27
SUSD6-201ENST00000342745 ZCCHC6Q5VYS8 1495 aaKnown RBP16.76■□□□□ 0.27
SUSD6-201ENST00000342745 CEP89Q96ST8 783 aa16.75■□□□□ 0.27
SUSD6-201ENST00000342745 CCDC180Q9P1Z9 1646 aa16.75■□□□□ 0.27
SUSD6-201ENST00000342745 TMF1P82094 1093 aa16.74■□□□□ 0.27
SUSD6-201ENST00000342745 PRM3Q9NNZ6 103 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms