RNA–Protein interactions for RNA: ENST00000342665.4

SOX12-201, Transcript of SRY-box 12, humanhuman

APPRIS P1 BASIC

Gene SOX12, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX12-201ENST00000342665 NPM1P06748 294 aaKnown RBP eCLIP27.16■■□□□ 1.94
SOX12-201ENST00000342665 SALL2Q9Y467 1007 aaPredicted RBP27.12■■□□□ 1.93
SOX12-201ENST00000342665 PLEKHD1A6NEE1 506 aa27.12■■□□□ 1.93
SOX12-201ENST00000342665 CCNB3Q8WWL7 1395 aa27.11■■□□□ 1.93
SOX12-201ENST00000342665 CCDC136Q96JN2 1154 aa27.09■■□□□ 1.93
SOX12-201ENST00000342665 VPS8Q8N3P4 1428 aa27.09■■□□□ 1.93
SOX12-201ENST00000342665 NPM2Q86SE8 214 aaKnown RBP27.09■■□□□ 1.93
SOX12-201ENST00000342665 CARMIL1Q5VZK9 1371 aa27.07■■□□□ 1.92
SOX12-201ENST00000342665 FHAD1B1AJZ9 1412 aa27.07■■□□□ 1.92
SOX12-201ENST00000342665 ABCC8Q09428 1581 aa27.05■■□□□ 1.92
SOX12-201ENST00000342665 SIN3AQ96ST3 1273 aa27.03■■□□□ 1.92
SOX12-201ENST00000342665 CFDP1Q9UEE9 299 aaPredicted RBP27.02■■□□□ 1.92
SOX12-201ENST00000342665 CUX2O14529 1486 aa27.01■■□□□ 1.91
SOX12-201ENST00000342665 ESF1Q9H501 851 aaKnown RBP26.98■■□□□ 1.91
SOX12-201ENST00000342665 STAG3Q9UJ98 1225 aa26.98■■□□□ 1.91
SOX12-201ENST00000342665 WDR43Q15061 677 aaKnown RBP eCLIP26.97■■□□□ 1.91
SOX12-201ENST00000342665 TIMELESSQ9UNS1 1208 aa26.96■■□□□ 1.91
SOX12-201ENST00000342665 BCL11AQ9H165 835 aa26.95■■□□□ 1.91
SOX12-201ENST00000342665 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.94■■□□□ 1.9
SOX12-201ENST00000342665 IRX6P78412 446 aaPredicted RBP26.93■■□□□ 1.9
SOX12-201ENST00000342665 SLC24A1O60721 1099 aa26.93■■□□□ 1.9
SOX12-201ENST00000342665 SMARCA2P51531 1590 aa26.9■■□□□ 1.9
SOX12-201ENST00000342665 TOP2AP11388 1531 aaKnown RBP26.9■■□□□ 1.9
SOX12-201ENST00000342665 WIZO95785 1651 aa26.88■■□□□ 1.89
SOX12-201ENST00000342665 KANK4Q5T7N3 995 aaPredicted RBP26.87■■□□□ 1.89
SOX12-201ENST00000342665 KCNH8Q96L42 1107 aa26.87■■□□□ 1.89
SOX12-201ENST00000342665 RGL3Q3MIN7 710 aa26.84■■□□□ 1.89
SOX12-201ENST00000342665 UPF2Q9HAU5 1272 aaKnown RBP26.82■■□□□ 1.88
SOX12-201ENST00000342665 SETD5Q9C0A6 1442 aa26.79■■□□□ 1.88
SOX12-201ENST00000342665 CARD11Q9BXL7 1154 aa26.78■■□□□ 1.88
SOX12-201ENST00000342665 SUPT16HQ9Y5B9 1047 aaKnown RBP26.75■■□□□ 1.87
SOX12-201ENST00000342665 CDCA8Q53HL2 280 aa26.69■■□□□ 1.86
SOX12-201ENST00000342665 ARHGAP35Q9NRY4 1499 aa26.67■■□□□ 1.86
SOX12-201ENST00000342665 HSP90AA1P07900 732 aaKnown RBP26.64■■□□□ 1.85
SOX12-201ENST00000342665 CCER2I3L3R5 266 aa26.62■■□□□ 1.85
SOX12-201ENST00000342665 KNSTRNQ9Y448 316 aa26.62■■□□□ 1.85
SOX12-201ENST00000342665 RAB3GAP2Q9H2M9 1393 aa26.62■■□□□ 1.85
SOX12-201ENST00000342665 EIF4G1Q04637 1599 aaKnown RBP26.6■■□□□ 1.85
SOX12-201ENST00000342665 FMN1Q68DA7 1419 aa26.59■■□□□ 1.85
SOX12-201ENST00000342665 ATAD2BQ9ULI0 1458 aa26.58■■□□□ 1.85
SOX12-201ENST00000342665 NBR1Q14596 966 aa26.58■■□□□ 1.84
SOX12-201ENST00000342665 RAPGEF2Q9Y4G8 1499 aa26.56■■□□□ 1.84
SOX12-201ENST00000342665 ERCC6Q03468 1493 aa26.56■■□□□ 1.84
SOX12-201ENST00000342665 PPP4R2Q9NY27 417 aa26.55■■□□□ 1.84
SOX12-201ENST00000342665 SMARCA4P51532 1647 aa26.55■■□□□ 1.84
SOX12-201ENST00000342665 TDRD9Q8NDG6 1382 aaKnown RBP26.54■■□□□ 1.84
SOX12-201ENST00000342665 CADPSQ9ULU8 1353 aa26.53■■□□□ 1.84
SOX12-201ENST00000342665 SENP3-EIF4A1A0A087X0R7 540 aa26.53■■□□□ 1.84
SOX12-201ENST00000342665 PDS5BQ9NTI5 1447 aa26.52■■□□□ 1.84
SOX12-201ENST00000342665 RUSC2Q8N2Y8 1516 aa26.5■■□□□ 1.83
SOX12-201ENST00000342665 HSPA5P11021 654 aaKnown RBP26.48■■□□□ 1.83
SOX12-201ENST00000342665 DCAF11Q8TEB1 546 aa26.48■■□□□ 1.83
SOX12-201ENST00000342665 PPP1R15AO75807 674 aaPredicted RBP26.48■■□□□ 1.83
SOX12-201ENST00000342665 CFAP53Q96M91 514 aa26.47■■□□□ 1.83
SOX12-201ENST00000342665 PLPPR3Q6T4P5 718 aa26.46■■□□□ 1.83
SOX12-201ENST00000342665 ANP32BQ92688 251 aaKnown RBP26.44■■□□□ 1.82
SOX12-201ENST00000342665 MPHOSPH9Q99550 1183 aa26.41■■□□□ 1.82
SOX12-201ENST00000342665 PKD2Q13563 968 aa26.4■■□□□ 1.82
SOX12-201ENST00000342665 DDRGK1Q96HY6 314 aa26.39■■□□□ 1.81
SOX12-201ENST00000342665 TMF1P82094 1093 aa26.37■■□□□ 1.81
SOX12-201ENST00000342665 FOXD1Q16676 465 aa26.36■■□□□ 1.81
SOX12-201ENST00000342665 ANP32EQ9BTT0 268 aa26.36■■□□□ 1.81
SOX12-201ENST00000342665 FHOD3Q2V2M9 1422 aa26.36■■□□□ 1.81
SOX12-201ENST00000342665 SENP3Q9H4L4 574 aaPredicted RBP26.35■■□□□ 1.81
SOX12-201ENST00000342665 MYH16Q9H6N6 1097 aa26.35■■□□□ 1.81
SOX12-201ENST00000342665 CARMIL2Q6F5E8 1435 aa26.35■■□□□ 1.81
SOX12-201ENST00000342665 CC2D1BQ5T0F9 858 aaKnown RBP26.33■■□□□ 1.81
SOX12-201ENST00000342665 DHX57Q6P158 1386 aaKnown RBP26.32■■□□□ 1.8
SOX12-201ENST00000342665 B4GALNT3Q6L9W6 998 aa26.3■■□□□ 1.8
SOX12-201ENST00000342665 BECN1Q14457 450 aa26.29■■□□□ 1.8
SOX12-201ENST00000342665 NEUROD2Q15784 382 aa26.26■■□□□ 1.79
SOX12-201ENST00000342665 NUDCQ9Y266 331 aa26.24■■□□□ 1.79
SOX12-201ENST00000342665 L3MBTL2Q969R5 705 aa26.24■■□□□ 1.79
SOX12-201ENST00000342665 ANKRD30AQ9BXX3 1397 aa26.23■■□□□ 1.79
SOX12-201ENST00000342665 NUP155O75694 1391 aa26.23■■□□□ 1.79
SOX12-201ENST00000342665 KANK1Q14678 1352 aa26.22■■□□□ 1.79
SOX12-201ENST00000342665 ERICH6BQ5W0A0 696 aa26.21■■□□□ 1.79
SOX12-201ENST00000342665 EIF5BO60841 1220 aaKnown RBP26.18■■□□□ 1.78
SOX12-201ENST00000342665 MAPK8IP3Q9UPT6 1336 aa26.18■■□□□ 1.78
SOX12-201ENST00000342665 FTSJ3Q8IY81 847 aaKnown RBP26.18■■□□□ 1.78
SOX12-201ENST00000342665 PPM1GO15355 546 aaPredicted RBP26.18■■□□□ 1.78
SOX12-201ENST00000342665 POGKQ9P215 609 aa26.18■■□□□ 1.78
SOX12-201ENST00000342665 TNNT2P45379 298 aaPredicted RBP26.14■■□□□ 1.78
SOX12-201ENST00000342665 EFCAB2Q5VUJ9 269 aa26.12■■□□□ 1.77
SOX12-201ENST00000342665 KTN1Q86UP2 1357 aaKnown RBP26.12■■□□□ 1.77
SOX12-201ENST00000342665 CCDC18Q5T9S5 1454 aa26.12■■□□□ 1.77
SOX12-201ENST00000342665 IGF1RP08069 1367 aa26.11■■□□□ 1.77
SOX12-201ENST00000342665 RGS3P49796 1198 aa26.11■■□□□ 1.77
SOX12-201ENST00000342665 RALBP1Q15311 655 aa26.11■■□□□ 1.77
SOX12-201ENST00000342665 FRAT1Q92837 279 aaPredicted RBP26.11■■□□□ 1.77
SOX12-201ENST00000342665 ARXQ96QS3 562 aa26.1■■□□□ 1.77
SOX12-201ENST00000342665 FANCD2Q9BXW9 1451 aa26.1■■□□□ 1.77
SOX12-201ENST00000342665 RBM19Q9Y4C8 960 aaKnown RBP26.09■■□□□ 1.77
SOX12-201ENST00000342665 NOP58Q9Y2X3 529 aaKnown RBP26.08■■□□□ 1.77
SOX12-201ENST00000342665 RSPH4AQ5TD94 716 aa26.08■■□□□ 1.77
SOX12-201ENST00000342665 ROCK2O75116 1388 aaKnown RBP26.07■■□□□ 1.76
SOX12-201ENST00000342665 MS4A1P11836 297 aa26.06■■□□□ 1.76
SOX12-201ENST00000342665 C14orf37Q86TY3 774 aa26.05■■□□□ 1.76
SOX12-201ENST00000342665 U2SURPO15042 1029 aaKnown RBP26.04■■□□□ 1.76
SOX12-201ENST00000342665 JPH4Q96JJ6 628 aa26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms