RNA–Protein interactions for RNA: ENST00000340898.6

RNFT1P3-201, Transcript of ring finger protein, transmembrane 1 pseudogene 3, humanhuman

BASIC

Gene RNFT1P3, Length 1,052 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1P3-201ENST00000340898 BBXQ8WY36 941 aaPredicted RBP11.88□□□□□ -0.51
RNFT1P3-201ENST00000340898 CIZ1Q9ULV3 898 aaPredicted RBP11.86□□□□□ -0.51
RNFT1P3-201ENST00000340898 CREBZFQ9NS37 354 aa11.85□□□□□ -0.51
RNFT1P3-201ENST00000340898 EIF4G1Q04637 1599 aaKnown RBP11.83□□□□□ -0.52
RNFT1P3-201ENST00000340898 VSIG10Q8N0Z9 540 aa11.82□□□□□ -0.52
RNFT1P3-201ENST00000340898 CC2D2AQ9P2K1 1620 aa11.82□□□□□ -0.52
RNFT1P3-201ENST00000340898 RGL2O15211 777 aa11.81□□□□□ -0.52
RNFT1P3-201ENST00000340898 GSE1Q14687 1217 aa11.81□□□□□ -0.52
RNFT1P3-201ENST00000340898 TRIM41Q8WV44 630 aa11.79□□□□□ -0.52
RNFT1P3-201ENST00000340898 NPM1P06748 294 aaKnown RBP eCLIP11.78□□□□□ -0.52
RNFT1P3-201ENST00000340898 DCAF8Q5TAQ9 597 aa11.77□□□□□ -0.53
RNFT1P3-201ENST00000340898 PAXIP1Q6ZW49 1069 aaPredicted RBP11.76□□□□□ -0.53
RNFT1P3-201ENST00000340898 NUBP1P53384 320 aa11.75□□□□□ -0.53
RNFT1P3-201ENST00000340898 CECR2Q9BXF3 1484 aa11.74□□□□□ -0.53
RNFT1P3-201ENST00000340898 MNX1P50219 401 aaPredicted RBP11.73□□□□□ -0.53
RNFT1P3-201ENST00000340898 FAM212AQ96EL1 285 aa11.73□□□□□ -0.53
RNFT1P3-201ENST00000340898 CFAP44Q96MT7 982 aa11.73□□□□□ -0.53
RNFT1P3-201ENST00000340898 BCANQ96GW7 911 aa11.72□□□□□ -0.53
RNFT1P3-201ENST00000340898 SPRYD3Q8NCJ5 442 aa11.69□□□□□ -0.54
RNFT1P3-201ENST00000340898 CHGAP10645 457 aaKnown RBP11.68□□□□□ -0.54
RNFT1P3-201ENST00000340898 CHADLQ6NUI6 762 aa11.68□□□□□ -0.54
RNFT1P3-201ENST00000340898 CHRDL2Q6WN34 429 aa11.67□□□□□ -0.54
RNFT1P3-201ENST00000340898 PRKAR2AP13861 404 aaKnown RBP11.65□□□□□ -0.54
RNFT1P3-201ENST00000340898 FXR2P51116 673 aaKnown RBP eCLIP11.64□□□□□ -0.55
RNFT1P3-201ENST00000340898 FARP1Q9Y4F1 1045 aaPredicted RBP11.64□□□□□ -0.55
RNFT1P3-201ENST00000340898 RASEFQ8IZ41 740 aa11.62□□□□□ -0.55
RNFT1P3-201ENST00000340898 TAOK2Q9UL54 1235 aa11.62□□□□□ -0.55
RNFT1P3-201ENST00000340898 KDM2AQ9Y2K7 1162 aa11.61□□□□□ -0.55
RNFT1P3-201ENST00000340898 HS6ST3Q8IZP7 471 aa11.58□□□□□ -0.56
RNFT1P3-201ENST00000340898 CHRM1P11229 460 aaPredicted RBP11.57□□□□□ -0.56
RNFT1P3-201ENST00000340898 PIP4P2Q8N4L2 257 aa11.55□□□□□ -0.56
RNFT1P3-201ENST00000340898 TSHZ2Q9NRE2 1034 aa11.55□□□□□ -0.56
RNFT1P3-201ENST00000340898 TSPYL2Q9H2G4 693 aaPredicted RBP11.54□□□□□ -0.56
RNFT1P3-201ENST00000340898 SMARCA4P51532 1647 aa11.53□□□□□ -0.56
RNFT1P3-201ENST00000340898 RIOK3O14730 519 aaKnown RBP11.53□□□□□ -0.56
RNFT1P3-201ENST00000340898 ATAD2BQ9ULI0 1458 aa11.52□□□□□ -0.56
RNFT1P3-201ENST00000340898 PAK3O75914 559 aaPredicted RBP11.52□□□□□ -0.57
RNFT1P3-201ENST00000340898 NCAPD3P42695 1498 aa11.51□□□□□ -0.57
RNFT1P3-201ENST00000340898 RNF25Q96BH1 459 aaPredicted RBP11.51□□□□□ -0.57
RNFT1P3-201ENST00000340898 PYGBP11216 843 aa11.5□□□□□ -0.57
RNFT1P3-201ENST00000340898 DNAJC5Q9H3Z4 198 aa11.5□□□□□ -0.57
RNFT1P3-201ENST00000340898 MROH2BQ7Z745 1585 aa11.49□□□□□ -0.57
RNFT1P3-201ENST00000340898 BAZ1AQ9NRL2 1556 aaPredicted RBP11.47□□□□□ -0.57
RNFT1P3-201ENST00000340898 VGFO15240 615 aaPredicted RBP11.47□□□□□ -0.57
RNFT1P3-201ENST00000340898 SMARCA2P51531 1590 aa11.43□□□□□ -0.58
RNFT1P3-201ENST00000340898 ZNF467Q7Z7K2 595 aaPredicted RBP11.41□□□□□ -0.58
RNFT1P3-201ENST00000340898 PEG3Q9GZU2 1588 aa11.41□□□□□ -0.58
RNFT1P3-201ENST00000340898 STK25O00506 426 aa11.4□□□□□ -0.58
RNFT1P3-201ENST00000340898 HMGXB3Q12766 1538 aa11.4□□□□□ -0.59
RNFT1P3-201ENST00000340898 SGIP1Q9BQI5 828 aa11.39□□□□□ -0.59
RNFT1P3-201ENST00000340898 BAZ1BQ9UIG0 1483 aaKnown RBP11.38□□□□□ -0.59
RNFT1P3-201ENST00000340898 PRKCSHP14314 528 aaPredicted RBP11.38□□□□□ -0.59
RNFT1P3-201ENST00000340898 CCDC61Q9Y6R9 512 aa11.38□□□□□ -0.59
RNFT1P3-201ENST00000340898 NKX1-1Q15270 411 aaPredicted RBP11.37□□□□□ -0.59
RNFT1P3-201ENST00000340898 WIZO95785 1651 aa11.35□□□□□ -0.59
RNFT1P3-201ENST00000340898 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.34□□□□□ -0.59
RNFT1P3-201ENST00000340898 GTPBP6O43824 516 aaPredicted RBP11.34□□□□□ -0.59
RNFT1P3-201ENST00000340898 CD44P16070 742 aaKnown RBP11.34□□□□□ -0.59
RNFT1P3-201ENST00000340898 ZFP91Q96JP5 570 aaPredicted RBP11.34□□□□□ -0.59
RNFT1P3-201ENST00000340898 ZRANB1Q9UGI0 708 aa11.34□□□□□ -0.59
RNFT1P3-201ENST00000340898 SP7Q8TDD2 431 aaPredicted RBP11.33□□□□□ -0.6
RNFT1P3-201ENST00000340898 STK24Q9Y6E0 443 aa11.33□□□□□ -0.6
RNFT1P3-201ENST00000340898 NESP48681 1621 aa11.33□□□□□ -0.6
RNFT1P3-201ENST00000340898 ZNF579Q8NAF0 562 aaKnown RBP11.32□□□□□ -0.6
RNFT1P3-201ENST00000340898 BCL11BQ9C0K0 894 aaPredicted RBP11.32□□□□□ -0.6
RNFT1P3-201ENST00000340898 RYDENQ9NUL5 291 aaKnown RBP11.32□□□□□ -0.6
RNFT1P3-201ENST00000340898 RSF1Q96T23 1441 aaPredicted RBP11.32□□□□□ -0.6
RNFT1P3-201ENST00000340898 PDAP1Q13442 181 aaKnown RBP11.31□□□□□ -0.6
RNFT1P3-201ENST00000340898 TPRNQ4KMQ1 711 aa11.31□□□□□ -0.6
RNFT1P3-201ENST00000340898 PCDHB13Q9Y5F0 798 aa11.31□□□□□ -0.6
RNFT1P3-201ENST00000340898 NBR1Q14596 966 aa11.3□□□□□ -0.6
RNFT1P3-201ENST00000340898 PCDHB8Q9UN66 801 aa11.3□□□□□ -0.6
RNFT1P3-201ENST00000340898 KIF12Q96FN5 646 aa11.28□□□□□ -0.6
RNFT1P3-201ENST00000340898 MAP3K13O43283 966 aa11.26□□□□□ -0.61
RNFT1P3-201ENST00000340898 PSEN1P49768 467 aa11.25□□□□□ -0.61
RNFT1P3-201ENST00000340898 C19orf67A6NJJ6 358 aa11.22□□□□□ -0.61
RNFT1P3-201ENST00000340898 ERCC6Q03468 1493 aa11.22□□□□□ -0.61
RNFT1P3-201ENST00000340898 IFNL1Q8IU54 200 aa11.22□□□□□ -0.61
RNFT1P3-201ENST00000340898 HAX1O00165 279 aa11.2□□□□□ -0.62
RNFT1P3-201ENST00000340898 PHF12Q96QT6 1004 aa11.2□□□□□ -0.62
RNFT1P3-201ENST00000340898 LAMC3Q9Y6N6 1575 aa11.19□□□□□ -0.62
RNFT1P3-201ENST00000340898 CADPSQ9ULU8 1353 aa11.18□□□□□ -0.62
RNFT1P3-201ENST00000340898 TOP2AP11388 1531 aaKnown RBP11.16□□□□□ -0.62
RNFT1P3-201ENST00000340898 KIF21AQ7Z4S6 1674 aa11.14□□□□□ -0.63
RNFT1P3-201ENST00000340898 CUX2O14529 1486 aa11.12□□□□□ -0.63
RNFT1P3-201ENST00000340898 THOC2Q8NI27 1593 aaKnown RBP11.11□□□□□ -0.63
RNFT1P3-201ENST00000340898 PDS5BQ9NTI5 1447 aa11.11□□□□□ -0.63
RNFT1P3-201ENST00000340898 CLCN6P51797 869 aa11.1□□□□□ -0.63
RNFT1P3-201ENST00000340898 CABP2Q9NPB3 220 aa11.1□□□□□ -0.63
RNFT1P3-201ENST00000340898 CCDC88BA6NC98 1476 aa11.1□□□□□ -0.63
RNFT1P3-201ENST00000340898 CFTRP13569 1480 aa11.09□□□□□ -0.63
RNFT1P3-201ENST00000340898 GOLGA2Q08379 1002 aa11.09□□□□□ -0.63
RNFT1P3-201ENST00000340898 SOX12O15370 315 aa11.08□□□□□ -0.64
RNFT1P3-201ENST00000340898 MS4A3Q96HJ5 214 aa11.08□□□□□ -0.64
RNFT1P3-201ENST00000340898 TMEM106CQ9BVX2 250 aa11.07□□□□□ -0.64
RNFT1P3-201ENST00000340898 NLRP6P59044 892 aa11.06□□□□□ -0.64
RNFT1P3-201ENST00000340898 P3H3Q8IVL6 736 aa11.06□□□□□ -0.64
RNFT1P3-201ENST00000340898 EFCAB3Q8N7B9 438 aa11.06□□□□□ -0.64
RNFT1P3-201ENST00000340898 WDR70Q9NW82 654 aa11.04□□□□□ -0.64
RNFT1P3-201ENST00000340898 FANCD2Q9BXW9 1451 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms