RNA–Protein interactions for RNA: ENST00000340001.8

ABCA9-201, Transcript of ATP binding cassette subfamily A member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA9, Length 6,514 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA9-201ENST00000340001 PPM1GO15355 546 aaPredicted RBP9.89□□□□□ -0.83
ABCA9-201ENST00000340001 EIF5BO60841 1220 aaKnown RBP9.89□□□□□ -0.83
ABCA9-201ENST00000340001 ANO8Q9HCE9 1232 aaPredicted RBP9.89□□□□□ -0.83
ABCA9-201ENST00000340001 ISY1Q9ULR0 285 aaKnown RBP9.88□□□□□ -0.83
ABCA9-201ENST00000340001 SOX12O15370 315 aa9.87□□□□□ -0.83
ABCA9-201ENST00000340001 MLECQ14165 292 aa9.87□□□□□ -0.83
ABCA9-201ENST00000340001 HNRNPUQ00839 825 aaKnown RBP eCLIP9.87□□□□□ -0.83
ABCA9-201ENST00000340001 NBR1Q14596 966 aa9.85□□□□□ -0.83
ABCA9-201ENST00000340001 AEBP2Q6ZN18 517 aaPredicted RBP9.85□□□□□ -0.83
ABCA9-201ENST00000340001 MIER1Q8N108 512 aa9.83□□□□□ -0.84
ABCA9-201ENST00000340001 CCDC9Q9Y3X0 531 aaKnown RBP9.82□□□□□ -0.84
ABCA9-201ENST00000340001 TONSLQ96HA7 1378 aa9.81□□□□□ -0.84
ABCA9-201ENST00000340001 PHF23Q9BUL5 403 aaPredicted RBP9.81□□□□□ -0.84
ABCA9-201ENST00000340001 PRM3Q9NNZ6 103 aa9.81□□□□□ -0.84
ABCA9-201ENST00000340001 ANP32AP39687 249 aaKnown RBP9.81□□□□□ -0.84
ABCA9-201ENST00000340001 TMC1Q8TDI8 760 aa9.79□□□□□ -0.84
ABCA9-201ENST00000340001 KLHL34Q8N239 644 aa9.77□□□□□ -0.84
ABCA9-201ENST00000340001 LAS1LQ9Y4W2 734 aaKnown RBP9.77□□□□□ -0.85
ABCA9-201ENST00000340001 ZNF330Q9Y3S2 320 aaPredicted RBP9.77□□□□□ -0.85
ABCA9-201ENST00000340001 DCAF1Q9Y4B6 1507 aa9.75□□□□□ -0.85
ABCA9-201ENST00000340001 PDE4CQ08493 712 aa9.75□□□□□ -0.85
ABCA9-201ENST00000340001 RRP7BPQ9NSQ0 103 aa9.74□□□□□ -0.85
ABCA9-201ENST00000340001 ZCCHC6Q5VYS8 1495 aaKnown RBP9.74□□□□□ -0.85
ABCA9-201ENST00000340001 NAP1L2Q9ULW6 460 aaPredicted RBP9.74□□□□□ -0.85
ABCA9-201ENST00000340001 FBXO3Q9UK99 471 aa9.73□□□□□ -0.85
ABCA9-201ENST00000340001 RGL3Q3MIN7 710 aa9.71□□□□□ -0.85
ABCA9-201ENST00000340001 ANP32BQ92688 251 aaKnown RBP9.71□□□□□ -0.85
ABCA9-201ENST00000340001 TNNT2P45379 298 aaPredicted RBP9.71□□□□□ -0.86
ABCA9-201ENST00000340001 GOLGA2Q08379 1002 aa9.7□□□□□ -0.86
ABCA9-201ENST00000340001 MRS2Q9HD23 443 aa9.69□□□□□ -0.86
ABCA9-201ENST00000340001 KRI1Q8N9T8 703 aaKnown RBP9.69□□□□□ -0.86
ABCA9-201ENST00000340001 CCDC136Q96JN2 1154 aa9.69□□□□□ -0.86
ABCA9-201ENST00000340001 NEUROD2Q15784 382 aa9.68□□□□□ -0.86
ABCA9-201ENST00000340001 CHMP7Q8WUX9 453 aaPredicted RBP9.68□□□□□ -0.86
ABCA9-201ENST00000340001 MSH5O43196 834 aa9.66□□□□□ -0.86
ABCA9-201ENST00000340001 WDR43Q15061 677 aaKnown RBP eCLIP9.65□□□□□ -0.86
ABCA9-201ENST00000340001 SAFB2Q14151 953 aaKnown RBP eCLIP9.65□□□□□ -0.86
ABCA9-201ENST00000340001 WWC1Q8IX03 1113 aa9.64□□□□□ -0.87
ABCA9-201ENST00000340001 MTUS2Q5JR59 1369 aa9.63□□□□□ -0.87
ABCA9-201ENST00000340001 CLIP1P30622 1438 aa9.63□□□□□ -0.87
ABCA9-201ENST00000340001 NCLP19338 710 aaKnown RBP9.63□□□□□ -0.87
ABCA9-201ENST00000340001 UPF2Q9HAU5 1272 aaKnown RBP9.63□□□□□ -0.87
ABCA9-201ENST00000340001 MYH16Q9H6N6 1097 aa9.63□□□□□ -0.87
ABCA9-201ENST00000340001 PAK3O75914 559 aaPredicted RBP9.62□□□□□ -0.87
ABCA9-201ENST00000340001 SIN3AQ96ST3 1273 aa9.61□□□□□ -0.87
ABCA9-201ENST00000340001 CEP162Q5TB80 1403 aa9.61□□□□□ -0.87
ABCA9-201ENST00000340001 OS9Q13438 667 aaPredicted RBP9.59□□□□□ -0.87
ABCA9-201ENST00000340001 PLCB2Q00722 1185 aa9.59□□□□□ -0.87
ABCA9-201ENST00000340001 SUPT16HQ9Y5B9 1047 aaKnown RBP9.59□□□□□ -0.87
ABCA9-201ENST00000340001 G3V3G9 751 aa9.58□□□□□ -0.88
ABCA9-201ENST00000340001 DCAF8Q5TAQ9 597 aa9.58□□□□□ -0.88
ABCA9-201ENST00000340001 CSB-PGBD3P0DP91 1061 aa9.57□□□□□ -0.88
ABCA9-201ENST00000340001 POGKQ9P215 609 aa9.56□□□□□ -0.88
ABCA9-201ENST00000340001 TSPY4P0CV99 314 aa9.56□□□□□ -0.88
ABCA9-201ENST00000340001 TSPY10P0CW01 314 aa9.56□□□□□ -0.88
ABCA9-201ENST00000340001 FGD1P98174 961 aa9.56□□□□□ -0.88
ABCA9-201ENST00000340001 ERICH6BQ5W0A0 696 aa9.56□□□□□ -0.88
ABCA9-201ENST00000340001 ZRSR1Q15695 479 aaKnown RBP9.55□□□□□ -0.88
ABCA9-201ENST00000340001 CCDC180Q9P1Z9 1646 aa9.54□□□□□ -0.88
ABCA9-201ENST00000340001 RTN4Q9NQC3 1192 aaKnown RBP9.54□□□□□ -0.88
ABCA9-201ENST00000340001 EIF4G2P78344 907 aaKnown RBP eCLIP9.54□□□□□ -0.88
ABCA9-201ENST00000340001 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.54□□□□□ -0.88
ABCA9-201ENST00000340001 RSF1Q96T23 1441 aaPredicted RBP9.54□□□□□ -0.88
ABCA9-201ENST00000340001 PPP1R1BQ9UD71 204 aaPredicted RBP9.54□□□□□ -0.88
ABCA9-201ENST00000340001 NUTM2FA1L443 756 aa9.53□□□□□ -0.88
ABCA9-201ENST00000340001 MEX3CQ5U5Q3 659 aaKnown RBP9.53□□□□□ -0.88
ABCA9-201ENST00000340001 CC2D1BQ5T0F9 858 aaKnown RBP9.52□□□□□ -0.89
ABCA9-201ENST00000340001 STK26Q9P289 416 aa9.52□□□□□ -0.89
ABCA9-201ENST00000340001 GOLGA3Q08378 1498 aa9.52□□□□□ -0.89
ABCA9-201ENST00000340001 TMX4Q9H1E5 349 aaPredicted RBP9.52□□□□□ -0.89
ABCA9-201ENST00000340001 APBB1O00213 710 aa9.51□□□□□ -0.89
ABCA9-201ENST00000340001 U2SURPO15042 1029 aaKnown RBP9.51□□□□□ -0.89
ABCA9-201ENST00000340001 KCNJ4P48050 445 aa9.5□□□□□ -0.89
ABCA9-201ENST00000340001 SAMD1Q6SPF0 538 aaPredicted RBP9.5□□□□□ -0.89
ABCA9-201ENST00000340001 RAD21O60216 631 aa9.49□□□□□ -0.89
ABCA9-201ENST00000340001 FOXD1Q16676 465 aa9.49□□□□□ -0.89
ABCA9-201ENST00000340001 CNKSR2Q8WXI2 1034 aa9.48□□□□□ -0.89
ABCA9-201ENST00000340001 VPS53Q5VIR6 699 aa9.48□□□□□ -0.89
ABCA9-201ENST00000340001 B4GALNT3Q6L9W6 998 aa9.48□□□□□ -0.89
ABCA9-201ENST00000340001 CHMP3Q9Y3E7 222 aa9.48□□□□□ -0.89
ABCA9-201ENST00000340001 ABCC8Q09428 1581 aa9.48□□□□□ -0.89
ABCA9-201ENST00000340001 NUTM2DQ5VT03 806 aaPredicted RBP9.47□□□□□ -0.89
ABCA9-201ENST00000340001 CARD11Q9BXL7 1154 aa9.47□□□□□ -0.89
ABCA9-201ENST00000340001 EIF4G1Q04637 1599 aaKnown RBP9.46□□□□□ -0.89
ABCA9-201ENST00000340001 WRNQ14191 1432 aaPredicted RBP eCLIP9.46□□□□□ -0.89
ABCA9-201ENST00000340001 RGS3P49796 1198 aa9.46□□□□□ -0.89
ABCA9-201ENST00000340001 FRAT1Q92837 279 aaPredicted RBP9.46□□□□□ -0.9
ABCA9-201ENST00000340001 SOGA1O94964 1423 aa9.46□□□□□ -0.9
ABCA9-201ENST00000340001 RB1CC1Q8TDY2 1594 aa9.45□□□□□ -0.9
ABCA9-201ENST00000340001 FBXW7Q969H0 707 aa9.45□□□□□ -0.9
ABCA9-201ENST00000340001 DCAF8L1A6NGE4 600 aa9.45□□□□□ -0.9
ABCA9-201ENST00000340001 PTMAP06454 111 aaKnown RBP9.44□□□□□ -0.9
ABCA9-201ENST00000340001 DNTTIP2Q5QJE6 756 aaKnown RBP9.44□□□□□ -0.9
ABCA9-201ENST00000340001 BAZ1BQ9UIG0 1483 aaKnown RBP9.44□□□□□ -0.9
ABCA9-201ENST00000340001 SPRYD3Q8NCJ5 442 aa9.44□□□□□ -0.9
ABCA9-201ENST00000340001 FTSJ3Q8IY81 847 aaKnown RBP9.43□□□□□ -0.9
ABCA9-201ENST00000340001 LTV1Q96GA3 475 aaPredicted RBP9.43□□□□□ -0.9
ABCA9-201ENST00000340001 GGT6Q6P531 493 aa9.43□□□□□ -0.9
ABCA9-201ENST00000340001 CFDP1Q9UEE9 299 aaPredicted RBP9.43□□□□□ -0.9
ABCA9-201ENST00000340001 CECR2Q9BXF3 1484 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms