RNA–Protein interactions for RNA: ENST00000332966.8

SLIT3-201, Transcript of slit guidance ligand 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SLIT3, Length 4,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-201ENST00000332966 VPS8Q8N3P4 1428 aa21.23■□□□□ 0.99
SLIT3-201ENST00000332966 SALL2Q9Y467 1007 aaPredicted RBP21.23■□□□□ 0.99
SLIT3-201ENST00000332966 SIN3AQ96ST3 1273 aa21.23■□□□□ 0.99
SLIT3-201ENST00000332966 CCNB3Q8WWL7 1395 aa21.22■□□□□ 0.99
SLIT3-201ENST00000332966 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.21■□□□□ 0.99
SLIT3-201ENST00000332966 ANP32BQ92688 251 aaKnown RBP21.2■□□□□ 0.98
SLIT3-201ENST00000332966 MTUS2Q5JR59 1369 aa21.19■□□□□ 0.98
SLIT3-201ENST00000332966 CHIC2Q9UKJ5 165 aa21.19■□□□□ 0.98
SLIT3-201ENST00000332966 B4GALNT3Q6L9W6 998 aa21.17■□□□□ 0.98
SLIT3-201ENST00000332966 NEFMP07197 916 aa21.17■□□□□ 0.98
SLIT3-201ENST00000332966 CECR2Q9BXF3 1484 aa21.14■□□□□ 0.98
SLIT3-201ENST00000332966 ARID3CA6NKF2 412 aa21.13■□□□□ 0.97
SLIT3-201ENST00000332966 BAZ1AQ9NRL2 1556 aaPredicted RBP21.1■□□□□ 0.97
SLIT3-201ENST00000332966 RTN4Q9NQC3 1192 aaKnown RBP21.09■□□□□ 0.97
SLIT3-201ENST00000332966 ZNF777Q9ULD5 760 aaPredicted RBP21.08■□□□□ 0.96
SLIT3-201ENST00000332966 LAS1LQ9Y4W2 734 aaKnown RBP21.07■□□□□ 0.96
SLIT3-201ENST00000332966 CCDC88BA6NC98 1476 aa21.06■□□□□ 0.96
SLIT3-201ENST00000332966 HSP90AA1P07900 732 aaKnown RBP21.05■□□□□ 0.96
SLIT3-201ENST00000332966 NACADO15069 1562 aa21.05■□□□□ 0.96
SLIT3-201ENST00000332966 RRP7BPQ9NSQ0 103 aa21.04■□□□□ 0.96
SLIT3-201ENST00000332966 SETD5Q9C0A6 1442 aa21.04■□□□□ 0.96
SLIT3-201ENST00000332966 BECN1Q14457 450 aa21.03■□□□□ 0.96
SLIT3-201ENST00000332966 KIF27Q86VH2 1401 aa21.03■□□□□ 0.96
SLIT3-201ENST00000332966 WDR43Q15061 677 aaKnown RBP eCLIP21■□□□□ 0.95
SLIT3-201ENST00000332966 ARXQ96QS3 562 aa20.99■□□□□ 0.95
SLIT3-201ENST00000332966 MROH2BQ7Z745 1585 aa20.99■□□□□ 0.95
SLIT3-201ENST00000332966 ABCC8Q09428 1581 aa20.99■□□□□ 0.95
SLIT3-201ENST00000332966 DHX57Q6P158 1386 aaKnown RBP20.97■□□□□ 0.95
SLIT3-201ENST00000332966 KANK4Q5T7N3 995 aaPredicted RBP20.95■□□□□ 0.95
SLIT3-201ENST00000332966 FANCIQ9NVI1 1328 aa20.95■□□□□ 0.94
SLIT3-201ENST00000332966 RAB3GAP2Q9H2M9 1393 aa20.95■□□□□ 0.94
SLIT3-201ENST00000332966 KCNH8Q96L42 1107 aa20.91■□□□□ 0.94
SLIT3-201ENST00000332966 PPP1R15AO75807 674 aaPredicted RBP20.9■□□□□ 0.94
SLIT3-201ENST00000332966 KDM2AQ9Y2K7 1162 aa20.9■□□□□ 0.94
SLIT3-201ENST00000332966 IPO9Q96P70 1041 aaKnown RBP20.88■□□□□ 0.93
SLIT3-201ENST00000332966 FHAD1B1AJZ9 1412 aa20.87■□□□□ 0.93
SLIT3-201ENST00000332966 TRIM44Q96DX7 344 aaPredicted RBP20.86■□□□□ 0.93
SLIT3-201ENST00000332966 SENP3-EIF4A1A0A087X0R7 540 aa20.86■□□□□ 0.93
SLIT3-201ENST00000332966 HSPA5P11021 654 aaKnown RBP20.85■□□□□ 0.93
SLIT3-201ENST00000332966 BAZ1BQ9UIG0 1483 aaKnown RBP20.81■□□□□ 0.92
SLIT3-201ENST00000332966 TCERG1O14776 1098 aaKnown RBP20.81■□□□□ 0.92
SLIT3-201ENST00000332966 FBLN2P98095 1184 aa20.78■□□□□ 0.92
SLIT3-201ENST00000332966 TSPY4P0CV99 314 aa20.78■□□□□ 0.92
SLIT3-201ENST00000332966 TSPY10P0CW01 314 aa20.78■□□□□ 0.92
SLIT3-201ENST00000332966 NAP1L5Q96NT1 182 aaPredicted RBP20.77■□□□□ 0.92
SLIT3-201ENST00000332966 CARD11Q9BXL7 1154 aa20.76■□□□□ 0.91
SLIT3-201ENST00000332966 RGS3P49796 1198 aa20.73■□□□□ 0.91
SLIT3-201ENST00000332966 USP35Q9P2H5 1018 aa20.73■□□□□ 0.91
SLIT3-201ENST00000332966 WIZO95785 1651 aa20.73■□□□□ 0.91
SLIT3-201ENST00000332966 L1TD1Q5T7N2 865 aaKnown RBP20.72■□□□□ 0.91
SLIT3-201ENST00000332966 NUDCQ9Y266 331 aa20.71■□□□□ 0.91
SLIT3-201ENST00000332966 ARHGAP35Q9NRY4 1499 aa20.71■□□□□ 0.91
SLIT3-201ENST00000332966 GOLGA6L22H0YM25 854 aa20.7■□□□□ 0.9
SLIT3-201ENST00000332966 TOP2AP11388 1531 aaKnown RBP20.7■□□□□ 0.9
SLIT3-201ENST00000332966 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.65■□□□□ 0.9
SLIT3-201ENST00000332966 RCAN3Q9UKA8 241 aa20.65■□□□□ 0.9
SLIT3-201ENST00000332966 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.64■□□□□ 0.9
SLIT3-201ENST00000332966 CARMIL1Q5VZK9 1371 aa20.64■□□□□ 0.89
SLIT3-201ENST00000332966 RAPGEF2Q9Y4G8 1499 aa20.64■□□□□ 0.89
SLIT3-201ENST00000332966 KNSTRNQ9Y448 316 aa20.63■□□□□ 0.89
SLIT3-201ENST00000332966 RUSC2Q8N2Y8 1516 aa20.63■□□□□ 0.89
SLIT3-201ENST00000332966 CDCA8Q53HL2 280 aa20.6■□□□□ 0.89
SLIT3-201ENST00000332966 ZBED9Q6R2W3 1325 aa20.59■□□□□ 0.89
SLIT3-201ENST00000332966 CUX2O14529 1486 aa20.55■□□□□ 0.88
SLIT3-201ENST00000332966 CFDP1Q9UEE9 299 aaPredicted RBP20.54■□□□□ 0.88
SLIT3-201ENST00000332966 RGL3Q3MIN7 710 aa20.54■□□□□ 0.88
SLIT3-201ENST00000332966 FMN1Q68DA7 1419 aa20.54■□□□□ 0.88
SLIT3-201ENST00000332966 RALBP1Q15311 655 aa20.54■□□□□ 0.88
SLIT3-201ENST00000332966 MYH16Q9H6N6 1097 aa20.53■□□□□ 0.88
SLIT3-201ENST00000332966 TNNT2P45379 298 aaPredicted RBP20.53■□□□□ 0.88
SLIT3-201ENST00000332966 PRKRIP1Q9H875 184 aaPredicted RBP20.52■□□□□ 0.88
SLIT3-201ENST00000332966 CC2D1BQ5T0F9 858 aaKnown RBP20.51■□□□□ 0.87
SLIT3-201ENST00000332966 MPHOSPH9Q99550 1183 aa20.51■□□□□ 0.87
SLIT3-201ENST00000332966 PDE3BQ13370 1112 aa20.5■□□□□ 0.87
SLIT3-201ENST00000332966 PDE4AP27815 886 aa20.49■□□□□ 0.87
SLIT3-201ENST00000332966 PNNQ9H307 717 aaKnown RBP20.49■□□□□ 0.87
SLIT3-201ENST00000332966 CHGAP10645 457 aaKnown RBP20.48■□□□□ 0.87
SLIT3-201ENST00000332966 NCLP19338 710 aaKnown RBP20.48■□□□□ 0.87
SLIT3-201ENST00000332966 GSE1Q14687 1217 aa20.48■□□□□ 0.87
SLIT3-201ENST00000332966 L3MBTL2Q969R5 705 aa20.48■□□□□ 0.87
SLIT3-201ENST00000332966 KTN1Q86UP2 1357 aaKnown RBP20.48■□□□□ 0.87
SLIT3-201ENST00000332966 FTSJ3Q8IY81 847 aaKnown RBP20.47■□□□□ 0.87
SLIT3-201ENST00000332966 RSPH6AQ9H0K4 717 aa20.47■□□□□ 0.87
SLIT3-201ENST00000332966 FRAT1Q92837 279 aaPredicted RBP20.45■□□□□ 0.86
SLIT3-201ENST00000332966 CFAP53Q96M91 514 aa20.44■□□□□ 0.86
SLIT3-201ENST00000332966 PTMAP06454 111 aaKnown RBP20.44■□□□□ 0.86
SLIT3-201ENST00000332966 SLC24A1O60721 1099 aa20.43■□□□□ 0.86
SLIT3-201ENST00000332966 MS4A1P11836 297 aa20.43■□□□□ 0.86
SLIT3-201ENST00000332966 HSCBQ8IWL3 235 aa20.43■□□□□ 0.86
SLIT3-201ENST00000332966 FOXD1Q16676 465 aa20.43■□□□□ 0.86
SLIT3-201ENST00000332966 TMF1P82094 1093 aa20.42■□□□□ 0.86
SLIT3-201ENST00000332966 PLEKHD1A6NEE1 506 aa20.42■□□□□ 0.86
SLIT3-201ENST00000332966 DCAF11Q8TEB1 546 aa20.42■□□□□ 0.86
SLIT3-201ENST00000332966 HSP90AB1P08238 724 aaKnown RBP20.41■□□□□ 0.86
SLIT3-201ENST00000332966 ROCK2O75116 1388 aaKnown RBP20.41■□□□□ 0.86
SLIT3-201ENST00000332966 DNTTIP2Q5QJE6 756 aaKnown RBP20.39■□□□□ 0.85
SLIT3-201ENST00000332966 SLKQ9H2G2 1235 aaPredicted RBP20.38■□□□□ 0.85
SLIT3-201ENST00000332966 NLRP13Q86W25 1043 aa20.37■□□□□ 0.85
SLIT3-201ENST00000332966 NEUROD2Q15784 382 aa20.37■□□□□ 0.85
SLIT3-201ENST00000332966 GOLGA6L3A6NEY3 463 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms