RNA–Protein interactions for RNA: ENST00000332687.10

RLIM-201, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RLIM, Length 8,317 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-201ENST00000332687 HRCP23327 699 aa6.62□□□□□ -1.35
RLIM-201ENST00000332687 AEBP2Q6ZN18 517 aaPredicted RBP6.62□□□□□ -1.35
RLIM-201ENST00000332687 WDR43Q15061 677 aaKnown RBP eCLIP6.61□□□□□ -1.35
RLIM-201ENST00000332687 SCAF1Q9H7N4 1312 aaKnown RBP6.61□□□□□ -1.35
RLIM-201ENST00000332687 PPARGC1BQ86YN6 1023 aaKnown RBP6.61□□□□□ -1.35
RLIM-201ENST00000332687 WRNQ14191 1432 aaPredicted RBP eCLIP6.61□□□□□ -1.35
RLIM-201ENST00000332687 FOXD1Q16676 465 aa6.6□□□□□ -1.35
RLIM-201ENST00000332687 P3H3Q8IVL6 736 aa6.6□□□□□ -1.35
RLIM-201ENST00000332687 GOLGA3Q08378 1498 aa6.59□□□□□ -1.35
RLIM-201ENST00000332687 DIEXFQ68CQ4 756 aaKnown RBP6.59□□□□□ -1.35
RLIM-201ENST00000332687 HSP90AA1P07900 732 aaKnown RBP6.59□□□□□ -1.36
RLIM-201ENST00000332687 CNGB1Q14028 1251 aaPredicted RBP6.59□□□□□ -1.36
RLIM-201ENST00000332687 TRHP20396 242 aaPredicted RBP6.58□□□□□ -1.36
RLIM-201ENST00000332687 CFAP44Q96MT7 982 aa6.57□□□□□ -1.36
RLIM-201ENST00000332687 HMGB2P26583 209 aaKnown RBP6.57□□□□□ -1.36
RLIM-201ENST00000332687 MS4A1P11836 297 aa6.57□□□□□ -1.36
RLIM-201ENST00000332687 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.57□□□□□ -1.36
RLIM-201ENST00000332687 CEP164Q9UPV0 1460 aa6.57□□□□□ -1.36
RLIM-201ENST00000332687 TMX4Q9H1E5 349 aaPredicted RBP6.57□□□□□ -1.36
RLIM-201ENST00000332687 ANP32AP39687 249 aaKnown RBP6.56□□□□□ -1.36
RLIM-201ENST00000332687 PLPPR3Q6T4P5 718 aa6.56□□□□□ -1.36
RLIM-201ENST00000332687 NUDCQ9Y266 331 aa6.56□□□□□ -1.36
RLIM-201ENST00000332687 RSPH4AQ5TD94 716 aa6.55□□□□□ -1.36
RLIM-201ENST00000332687 ANP32EQ9BTT0 268 aa6.55□□□□□ -1.36
RLIM-201ENST00000332687 CFDP1Q9UEE9 299 aaPredicted RBP6.55□□□□□ -1.36
RLIM-201ENST00000332687 CASC1Q6TDU7 716 aa6.54□□□□□ -1.36
RLIM-201ENST00000332687 LOC105371045A0A1W2PR82 267 aa6.54□□□□□ -1.36
RLIM-201ENST00000332687 NPHP1O15259 732 aa6.54□□□□□ -1.36
RLIM-201ENST00000332687 TMC1Q8TDI8 760 aa6.54□□□□□ -1.36
RLIM-201ENST00000332687 HDAC5Q9UQL6 1122 aa6.54□□□□□ -1.36
RLIM-201ENST00000332687 A0A0G2JS52 829 aa6.53□□□□□ -1.36
RLIM-201ENST00000332687 ARID3CA6NKF2 412 aa6.52□□□□□ -1.37
RLIM-201ENST00000332687 KCNH8Q96L42 1107 aa6.52□□□□□ -1.37
RLIM-201ENST00000332687 POGKQ9P215 609 aa6.52□□□□□ -1.37
RLIM-201ENST00000332687 DCAF8L1A6NGE4 600 aa6.51□□□□□ -1.37
RLIM-201ENST00000332687 CCNB3Q8WWL7 1395 aa6.51□□□□□ -1.37
RLIM-201ENST00000332687 EID1Q9Y6B2 187 aa6.5□□□□□ -1.37
RLIM-201ENST00000332687 CALD1Q05682 793 aaKnown RBP6.5□□□□□ -1.37
RLIM-201ENST00000332687 NCLP19338 710 aaKnown RBP6.49□□□□□ -1.37
RLIM-201ENST00000332687 KNSTRNQ9Y448 316 aa6.49□□□□□ -1.37
RLIM-201ENST00000332687 GOLGA2Q08379 1002 aa6.49□□□□□ -1.37
RLIM-201ENST00000332687 FMN1Q68DA7 1419 aa6.48□□□□□ -1.37
RLIM-201ENST00000332687 MAPK8IP3Q9UPT6 1336 aa6.48□□□□□ -1.37
RLIM-201ENST00000332687 ZRSR1Q15695 479 aaKnown RBP6.48□□□□□ -1.37
RLIM-201ENST00000332687 EFCAB2Q5VUJ9 269 aa6.48□□□□□ -1.37
RLIM-201ENST00000332687 WASHC2AQ641Q2 1341 aa6.47□□□□□ -1.37
RLIM-201ENST00000332687 EIF3AQ14152 1382 aaKnown RBP6.47□□□□□ -1.37
RLIM-201ENST00000332687 L1TD1Q5T7N2 865 aaKnown RBP6.46□□□□□ -1.38
RLIM-201ENST00000332687 GOLGA6L22H0YM25 854 aa6.46□□□□□ -1.38
RLIM-201ENST00000332687 UACAQ9BZF9 1416 aa6.46□□□□□ -1.38
RLIM-201ENST00000332687 TIMELESSQ9UNS1 1208 aa6.46□□□□□ -1.38
RLIM-201ENST00000332687 BECN1Q14457 450 aa6.46□□□□□ -1.38
RLIM-201ENST00000332687 EIF4G1Q04637 1599 aaKnown RBP6.45□□□□□ -1.38
RLIM-201ENST00000332687 CECR2Q9BXF3 1484 aa6.44□□□□□ -1.38
RLIM-201ENST00000332687 CARMIL1Q5VZK9 1371 aa6.44□□□□□ -1.38
RLIM-201ENST00000332687 ZBTB7CA1YPR0 619 aa6.44□□□□□ -1.38
RLIM-201ENST00000332687 HDGFL2Q7Z4V5 671 aaPredicted RBP6.44□□□□□ -1.38
RLIM-201ENST00000332687 CCDC18Q5T9S5 1454 aa6.43□□□□□ -1.38
RLIM-201ENST00000332687 NRDCO43847 1150 aa6.43□□□□□ -1.38
RLIM-201ENST00000332687 WWC1Q8IX03 1113 aa6.43□□□□□ -1.38
RLIM-201ENST00000332687 CUX2O14529 1486 aa6.43□□□□□ -1.38
RLIM-201ENST00000332687 TNIKQ9UKE5 1360 aa6.42□□□□□ -1.38
RLIM-201ENST00000332687 GOLGA6L6A8MZA4 724 aa6.42□□□□□ -1.38
RLIM-201ENST00000332687 CHIC2Q9UKJ5 165 aa6.42□□□□□ -1.38
RLIM-201ENST00000332687 KDM2AQ9Y2K7 1162 aa6.42□□□□□ -1.38
RLIM-201ENST00000332687 TMF1P82094 1093 aa6.42□□□□□ -1.38
RLIM-201ENST00000332687 DDRGK1Q96HY6 314 aa6.42□□□□□ -1.38
RLIM-201ENST00000332687 SOGA1O94964 1423 aa6.42□□□□□ -1.38
RLIM-201ENST00000332687 LMOD2Q6P5Q4 547 aa6.41□□□□□ -1.38
RLIM-201ENST00000332687 CHMP4CQ96CF2 233 aa6.41□□□□□ -1.38
RLIM-201ENST00000332687 OSCARQ8IYS5 282 aa6.4□□□□□ -1.38
RLIM-201ENST00000332687 RTF1Q92541 710 aaKnown RBP6.4□□□□□ -1.38
RLIM-201ENST00000332687 CCDC34Q96HJ3 373 aa6.4□□□□□ -1.38
RLIM-201ENST00000332687 ARHGAP35Q9NRY4 1499 aa6.4□□□□□ -1.38
RLIM-201ENST00000332687 ANKRD30AQ9BXX3 1397 aa6.4□□□□□ -1.38
RLIM-201ENST00000332687 FTSJ3Q8IY81 847 aaKnown RBP6.4□□□□□ -1.38
RLIM-201ENST00000332687 ARXQ96QS3 562 aa6.4□□□□□ -1.38
RLIM-201ENST00000332687 SETD5Q9C0A6 1442 aa6.4□□□□□ -1.39
RLIM-201ENST00000332687 STAC3Q96MF2 364 aa6.39□□□□□ -1.39
RLIM-201ENST00000332687 TOP2AP11388 1531 aaKnown RBP6.39□□□□□ -1.39
RLIM-201ENST00000332687 BCL11AQ9H165 835 aa6.39□□□□□ -1.39
RLIM-201ENST00000332687 CADPSQ9ULU8 1353 aa6.38□□□□□ -1.39
RLIM-201ENST00000332687 MCCP23508 829 aa6.38□□□□□ -1.39
RLIM-201ENST00000332687 LMOD3Q0VAK6 560 aa6.38□□□□□ -1.39
RLIM-201ENST00000332687 CARD11Q9BXL7 1154 aa6.38□□□□□ -1.39
RLIM-201ENST00000332687 SPAG9O60271 1321 aaKnown RBP6.38□□□□□ -1.39
RLIM-201ENST00000332687 MRS2Q9HD23 443 aa6.37□□□□□ -1.39
RLIM-201ENST00000332687 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.37□□□□□ -1.39
RLIM-201ENST00000332687 TERF2IPQ9NYB0 399 aa6.37□□□□□ -1.39
RLIM-201ENST00000332687 HNRNPUQ00839 825 aaKnown RBP eCLIP6.37□□□□□ -1.39
RLIM-201ENST00000332687 OS9Q13438 667 aaPredicted RBP6.37□□□□□ -1.39
RLIM-201ENST00000332687 CCDC136Q96JN2 1154 aa6.37□□□□□ -1.39
RLIM-201ENST00000332687 IPO8O15397 1037 aaKnown RBP6.36□□□□□ -1.39
RLIM-201ENST00000332687 SRPK2P78362 688 aaKnown RBP6.36□□□□□ -1.39
RLIM-201ENST00000332687 LRRFIP1Q32MZ4 808 aaKnown RBP6.36□□□□□ -1.39
RLIM-201ENST00000332687 GPATCH3Q96I76 525 aa6.36□□□□□ -1.39
RLIM-201ENST00000332687 G3V3G9 751 aa6.35□□□□□ -1.39
RLIM-201ENST00000332687 DCAF8Q5TAQ9 597 aa6.35□□□□□ -1.39
RLIM-201ENST00000332687 RRP7BPQ9NSQ0 103 aa6.35□□□□□ -1.39
RLIM-201ENST00000332687 HTATSF1O43719 755 aaKnown RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms