RNA–Protein interactions for RNA: ENST00000330843.8

RAB11FIP1-202, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene RAB11FIP1, Length 7,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-202ENST00000330843 P3H3Q8IVL6 736 aa16.84■□□□□ 0.29
RAB11FIP1-202ENST00000330843 WDR43Q15061 677 aaKnown RBP eCLIP16.83■□□□□ 0.281e-7■■■□□ 14.9
RAB11FIP1-202ENST00000330843 ZRSR1Q15695 479 aaKnown RBP16.83■□□□□ 0.28
RAB11FIP1-202ENST00000330843 MYH16Q9H6N6 1097 aa16.82■□□□□ 0.28
RAB11FIP1-202ENST00000330843 TONSLQ96HA7 1378 aa16.82■□□□□ 0.28
RAB11FIP1-202ENST00000330843 MRS2Q9HD23 443 aa16.81■□□□□ 0.28
RAB11FIP1-202ENST00000330843 ZNF777Q9ULD5 760 aaPredicted RBP16.8■□□□□ 0.28
RAB11FIP1-202ENST00000330843 NOP58Q9Y2X3 529 aaKnown RBP16.78■□□□□ 0.28
RAB11FIP1-202ENST00000330843 CHGAP10645 457 aaKnown RBP16.78■□□□□ 0.28
RAB11FIP1-202ENST00000330843 PLPPR3Q6T4P5 718 aa16.77■□□□□ 0.28
RAB11FIP1-202ENST00000330843 CALRP27797 417 aaKnown RBP16.76■□□□□ 0.27
RAB11FIP1-202ENST00000330843 PPM1GO15355 546 aaPredicted RBP16.74■□□□□ 0.27
RAB11FIP1-202ENST00000330843 SUPT16HQ9Y5B9 1047 aaKnown RBP16.74■□□□□ 0.27
RAB11FIP1-202ENST00000330843 MSNP26038 577 aaKnown RBP16.71■□□□□ 0.27
RAB11FIP1-202ENST00000330843 FBLN2P98095 1184 aa16.71■□□□□ 0.27
RAB11FIP1-202ENST00000330843 CHAF1AQ13111 956 aaPredicted RBP16.71■□□□□ 0.26
RAB11FIP1-202ENST00000330843 NCBP3Q53F19 620 aaKnown RBP16.69■□□□□ 0.26
RAB11FIP1-202ENST00000330843 A0A0U1RQG5 324 aaPredicted RBP16.69■□□□□ 0.26
RAB11FIP1-202ENST00000330843 VSIG10Q8N0Z9 540 aa16.69■□□□□ 0.26
RAB11FIP1-202ENST00000330843 A0A0G2JS52 829 aa16.68■□□□□ 0.26
RAB11FIP1-202ENST00000330843 SPRYD3Q8NCJ5 442 aa16.68■□□□□ 0.26
RAB11FIP1-202ENST00000330843 PLEKHG5O94827 1062 aa16.67■□□□□ 0.26
RAB11FIP1-202ENST00000330843 SENP3Q9H4L4 574 aaPredicted RBP16.65■□□□□ 0.26
RAB11FIP1-202ENST00000330843 KDM2AQ9Y2K7 1162 aa16.65■□□□□ 0.26
RAB11FIP1-202ENST00000330843 HSP90AB1P08238 724 aaKnown RBP16.65■□□□□ 0.26
RAB11FIP1-202ENST00000330843 STAG3Q9UJ98 1225 aa16.63■□□□□ 0.25
RAB11FIP1-202ENST00000330843 RGS3P49796 1198 aa16.63■□□□□ 0.25
RAB11FIP1-202ENST00000330843 DRC7Q8IY82 874 aa16.62■□□□□ 0.25
RAB11FIP1-202ENST00000330843 GOLGA6L6A8MZA4 724 aa16.61■□□□□ 0.25
RAB11FIP1-202ENST00000330843 CASC1Q6TDU7 716 aa16.61■□□□□ 0.25
RAB11FIP1-202ENST00000330843 HSP90AA2PQ14568 343 aaPredicted RBP16.59■□□□□ 0.25
RAB11FIP1-202ENST00000330843 PODXL2Q9NZ53 605 aa16.56■□□□□ 0.24
RAB11FIP1-202ENST00000330843 B4GALNT3Q6L9W6 998 aa16.55■□□□□ 0.24
RAB11FIP1-202ENST00000330843 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.55■□□□□ 0.241e-6■■□□□ 14.4
RAB11FIP1-202ENST00000330843 CSRNP3Q8WYN3 585 aa16.55■□□□□ 0.24
RAB11FIP1-202ENST00000330843 NAP1L2Q9ULW6 460 aaPredicted RBP16.54■□□□□ 0.24
RAB11FIP1-202ENST00000330843 FTSJ3Q8IY81 847 aaKnown RBP16.54■□□□□ 0.24
RAB11FIP1-202ENST00000330843 GZF1Q9H116 711 aaPredicted RBP16.53■□□□□ 0.24
RAB11FIP1-202ENST00000330843 L1TD1Q5T7N2 865 aaKnown RBP16.53■□□□□ 0.24
RAB11FIP1-202ENST00000330843 CHIC2Q9UKJ5 165 aa16.53■□□□□ 0.24
RAB11FIP1-202ENST00000330843 APPP05067 770 aa16.52■□□□□ 0.24
RAB11FIP1-202ENST00000330843 PNNQ9H307 717 aaKnown RBP16.5■□□□□ 0.23
RAB11FIP1-202ENST00000330843 NRDCO43847 1150 aa16.48■□□□□ 0.23
RAB11FIP1-202ENST00000330843 ESF1Q9H501 851 aaKnown RBP16.46■□□□□ 0.23
RAB11FIP1-202ENST00000330843 PTMSP20962 102 aa16.46■□□□□ 0.23
RAB11FIP1-202ENST00000330843 TIMELESSQ9UNS1 1208 aa16.45■□□□□ 0.22
RAB11FIP1-202ENST00000330843 PPP4R2Q9NY27 417 aa16.45■□□□□ 0.22
RAB11FIP1-202ENST00000330843 RBM19Q9Y4C8 960 aaKnown RBP16.45■□□□□ 0.22
RAB11FIP1-202ENST00000330843 FGD1P98174 961 aa16.44■□□□□ 0.22
RAB11FIP1-202ENST00000330843 CLSTN1O94985 981 aa16.43■□□□□ 0.22
RAB11FIP1-202ENST00000330843 NEUROD2Q15784 382 aa16.43■□□□□ 0.22
RAB11FIP1-202ENST00000330843 GOLGA6L4A6NEF3 574 aa16.43■□□□□ 0.22
RAB11FIP1-202ENST00000330843 FRAT1Q92837 279 aaPredicted RBP16.43■□□□□ 0.22
RAB11FIP1-202ENST00000330843 HSCBQ8IWL3 235 aa16.43■□□□□ 0.22
RAB11FIP1-202ENST00000330843 SETQ01105 290 aaPredicted RBP16.42■□□□□ 0.22
RAB11FIP1-202ENST00000330843 C14orf37Q86TY3 774 aa16.42■□□□□ 0.22
RAB11FIP1-202ENST00000330843 NOC3LQ8WTT2 800 aaKnown RBP16.41■□□□□ 0.22
RAB11FIP1-202ENST00000330843 PKNOX2Q96KN3 472 aa16.4■□□□□ 0.22
RAB11FIP1-202ENST00000330843 KCNJ4P48050 445 aa16.39■□□□□ 0.21
RAB11FIP1-202ENST00000330843 EIF4G2P78344 907 aaKnown RBP eCLIP16.36■□□□□ 0.21
RAB11FIP1-202ENST00000330843 RSPH6AQ9H0K4 717 aa16.36■□□□□ 0.21
RAB11FIP1-202ENST00000330843 GOLGA6L1Q8N7Z2 621 aa16.36■□□□□ 0.21
RAB11FIP1-202ENST00000330843 PDE4CQ08493 712 aa16.35■□□□□ 0.21
RAB11FIP1-202ENST00000330843 KIAA2012Q0VF49 1180 aa16.34■□□□□ 0.21
RAB11FIP1-202ENST00000330843 DCAF1Q9Y4B6 1507 aa16.33■□□□□ 0.2
RAB11FIP1-202ENST00000330843 ZNF771Q7L3S4 317 aaPredicted RBP16.32■□□□□ 0.2
RAB11FIP1-202ENST00000330843 OS9Q13438 667 aaPredicted RBP16.32■□□□□ 0.2
RAB11FIP1-202ENST00000330843 SLKQ9H2G2 1235 aaPredicted RBP16.31■□□□□ 0.2
RAB11FIP1-202ENST00000330843 PRKCSHP14314 528 aaPredicted RBP16.31■□□□□ 0.2
RAB11FIP1-202ENST00000330843 PATL2C9JE40 543 aaKnown RBP16.29■□□□□ 0.2
RAB11FIP1-202ENST00000330843 PABPN1Q86U42 306 aaKnown RBP eCLIP16.27■□□□□ 0.19
RAB11FIP1-202ENST00000330843 ANO8Q9HCE9 1232 aaPredicted RBP16.26■□□□□ 0.19
RAB11FIP1-202ENST00000330843 TAF7LQ5H9L4 462 aa16.25■□□□□ 0.19
RAB11FIP1-202ENST00000330843 PRM3Q9NNZ6 103 aa16.24■□□□□ 0.19
RAB11FIP1-202ENST00000330843 GOLGA6L3A6NEY3 463 aa16.23■□□□□ 0.19
RAB11FIP1-202ENST00000330843 GNL2Q13823 731 aaKnown RBP16.22■□□□□ 0.19
RAB11FIP1-202ENST00000330843 CC2D1BQ5T0F9 858 aaKnown RBP16.22■□□□□ 0.19
RAB11FIP1-202ENST00000330843 RGL3Q3MIN7 710 aa16.22■□□□□ 0.19
RAB11FIP1-202ENST00000330843 KNSTRNQ9Y448 316 aa16.21■□□□□ 0.19
RAB11FIP1-202ENST00000330843 GBP4Q96PP9 640 aa16.2■□□□□ 0.18
RAB11FIP1-202ENST00000330843 RRP7BPQ9NSQ0 103 aa16.2■□□□□ 0.18
RAB11FIP1-202ENST00000330843 CFAP53Q96M91 514 aa16.2■□□□□ 0.18
RAB11FIP1-202ENST00000330843 APBB1O00213 710 aa16.19■□□□□ 0.18
RAB11FIP1-202ENST00000330843 FOXD4L1Q9NU39 408 aa16.18■□□□□ 0.18
RAB11FIP1-202ENST00000330843 MCCP23508 829 aa16.18■□□□□ 0.18
RAB11FIP1-202ENST00000330843 CREBRFQ8IUR6 639 aa16.17■□□□□ 0.18
RAB11FIP1-202ENST00000330843 USP35Q9P2H5 1018 aa16.17■□□□□ 0.18
RAB11FIP1-202ENST00000330843 MAPK8IP3Q9UPT6 1336 aa16.16■□□□□ 0.18
RAB11FIP1-202ENST00000330843 GOLGA2Q08379 1002 aa16.16■□□□□ 0.18
RAB11FIP1-202ENST00000330843 ISY1Q9ULR0 285 aaKnown RBP16.16■□□□□ 0.18
RAB11FIP1-202ENST00000330843 NPHP1O15259 732 aa16.16■□□□□ 0.18
RAB11FIP1-202ENST00000330843 FBXO3Q9UK99 471 aa16.14■□□□□ 0.17
RAB11FIP1-202ENST00000330843 HSP90B1P14625 803 aaKnown RBP16.12■□□□□ 0.17
RAB11FIP1-202ENST00000330843 TSHZ2Q9NRE2 1034 aa16.11■□□□□ 0.17
RAB11FIP1-202ENST00000330843 FOXD4L5Q5VV16 416 aaPredicted RBP16.11■□□□□ 0.17
RAB11FIP1-202ENST00000330843 FOXD4L4Q8WXT5 416 aaPredicted RBP16.11■□□□□ 0.17
RAB11FIP1-202ENST00000330843 U2SURPO15042 1029 aaKnown RBP16.11■□□□□ 0.17
RAB11FIP1-202ENST00000330843 CCDC180Q9P1Z9 1646 aa16.11■□□□□ 0.17
RAB11FIP1-202ENST00000330843 CCAR2Q8N163 923 aaKnown RBP16.09■□□□□ 0.17
RAB11FIP1-202ENST00000330843 SYAP1Q96A49 352 aaPredicted RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms