RNA–Protein interactions for RNA: ENST00000330828.2

C12orf60-201, Transcript of chromosome 12 open reading frame 60, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C12orf60, Length 1,684 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf60-201ENST00000330828 PHF12Q96QT6 1004 aa9.84□□□□□ -0.83
C12orf60-201ENST00000330828 FAM163AQ96GL9 167 aaPredicted RBP9.83□□□□□ -0.84
C12orf60-201ENST00000330828 STAG3Q9UJ98 1225 aa9.83□□□□□ -0.84
C12orf60-201ENST00000330828 SCUBE2Q9NQ36 999 aa9.82□□□□□ -0.84
C12orf60-201ENST00000330828 ATMINO43313 823 aaPredicted RBP9.79□□□□□ -0.84
C12orf60-201ENST00000330828 NPM1P06748 294 aaKnown RBP eCLIP9.75□□□□□ -0.85
C12orf60-201ENST00000330828 CDAN1Q8IWY9 1227 aa9.71□□□□□ -0.85
C12orf60-201ENST00000330828 MS4A3Q96HJ5 214 aa9.71□□□□□ -0.85
C12orf60-201ENST00000330828 MNX1P50219 401 aaPredicted RBP9.63□□□□□ -0.87
C12orf60-201ENST00000330828 ATN1P54259 1190 aaPredicted RBP9.61□□□□□ -0.87
C12orf60-201ENST00000330828 POTEFA5A3E0 1075 aa9.58□□□□□ -0.88
C12orf60-201ENST00000330828 ABCC9O60706 1549 aa9.56□□□□□ -0.88
C12orf60-201ENST00000330828 MMRN1Q13201 1228 aa9.55□□□□□ -0.88
C12orf60-201ENST00000330828 BMP2KQ9NSY1 1161 aaPredicted RBP9.51□□□□□ -0.89
C12orf60-201ENST00000330828 SPNS2Q8IVW8 549 aa9.51□□□□□ -0.89
C12orf60-201ENST00000330828 TIE1P35590 1138 aa9.5□□□□□ -0.89
C12orf60-201ENST00000330828 ST18O60284 1047 aa9.48□□□□□ -0.89
C12orf60-201ENST00000330828 KIF12Q96FN5 646 aa9.48□□□□□ -0.89
C12orf60-201ENST00000330828 CCDC61Q9Y6R9 512 aa9.48□□□□□ -0.89
C12orf60-201ENST00000330828 SEC24BO95487 1268 aa9.46□□□□□ -0.89
C12orf60-201ENST00000330828 COLQQ9Y215 455 aaPredicted RBP9.45□□□□□ -0.9
C12orf60-201ENST00000330828 IER5LQ5T953 404 aa9.44□□□□□ -0.9
C12orf60-201ENST00000330828 TMEM121BQ9BXQ6 578 aaPredicted RBP9.43□□□□□ -0.9
C12orf60-201ENST00000330828 TSPYL2Q9H2G4 693 aaPredicted RBP9.43□□□□□ -0.9
C12orf60-201ENST00000330828 SLAIN1Q8ND83 568 aa9.42□□□□□ -0.9
C12orf60-201ENST00000330828 SPDYE4A6NLX3 237 aa9.4□□□□□ -0.9
C12orf60-201ENST00000330828 TRPC6Q9Y210 931 aa9.39□□□□□ -0.91
C12orf60-201ENST00000330828 TTLL13PA6NNM8 815 aa9.38□□□□□ -0.91
C12orf60-201ENST00000330828 MAP3K13O43283 966 aa9.35□□□□□ -0.91
C12orf60-201ENST00000330828 SNPHO15079 494 aa9.32□□□□□ -0.92
C12orf60-201ENST00000330828 CCDC180Q9P1Z9 1646 aa9.31□□□□□ -0.92
C12orf60-201ENST00000330828 TRIM35Q9UPQ4 493 aa9.31□□□□□ -0.92
C12orf60-201ENST00000330828 SGIP1Q9BQI5 828 aa9.3□□□□□ -0.92
C12orf60-201ENST00000330828 PLCG2P16885 1265 aa9.24□□□□□ -0.93
C12orf60-201ENST00000330828 EHMT2Q96KQ7 1210 aa9.22□□□□□ -0.93
C12orf60-201ENST00000330828 MARVELD3Q96A59 401 aa9.2□□□□□ -0.94
C12orf60-201ENST00000330828 IRX5P78411 483 aaPredicted RBP9.18□□□□□ -0.94
C12orf60-201ENST00000330828 RASEFQ8IZ41 740 aa9.18□□□□□ -0.94
C12orf60-201ENST00000330828 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.17□□□□□ -0.94
C12orf60-201ENST00000330828 PCDHB13Q9Y5F0 798 aa9.17□□□□□ -0.94
C12orf60-201ENST00000330828 PLEKHG5O94827 1062 aa9.16□□□□□ -0.94
C12orf60-201ENST00000330828 KRTAP3-3Q9BYR6 98 aa9.16□□□□□ -0.94
C12orf60-201ENST00000330828 KRTAP3-2Q9BYR7 98 aa9.16□□□□□ -0.94
C12orf60-201ENST00000330828 EMP3P54852 163 aa9.14□□□□□ -0.95
C12orf60-201ENST00000330828 PROM2Q8N271 834 aa9.13□□□□□ -0.95
C12orf60-201ENST00000330828 TMEM106CQ9BVX2 250 aa9.13□□□□□ -0.95
C12orf60-201ENST00000330828 OCEL1Q9H607 264 aa9.13□□□□□ -0.95
C12orf60-201ENST00000330828 HS3ST6Q96QI5 342 aa9.1□□□□□ -0.95
C12orf60-201ENST00000330828 IFNL1Q8IU54 200 aa9.09□□□□□ -0.95
C12orf60-201ENST00000330828 POTEB3A0JP26 581 aa9.05□□□□□ -0.96
C12orf60-201ENST00000330828 POTEBQ6S5H4 581 aa9.05□□□□□ -0.96
C12orf60-201ENST00000330828 MIER1Q8N108 512 aa9.04□□□□□ -0.96
C12orf60-201ENST00000330828 FAM205CA6NFA0 338 aa9.03□□□□□ -0.96
C12orf60-201ENST00000330828 RB1CC1Q8TDY2 1594 aa9.03□□□□□ -0.96
C12orf60-201ENST00000330828 DCAF8L2P0C7V8 631 aa9.01□□□□□ -0.97
C12orf60-201ENST00000330828 C3orf67Q6ZVT6 689 aa8.99□□□□□ -0.97
C12orf60-201ENST00000330828 RNF166Q96A37 237 aaPredicted RBP8.98□□□□□ -0.97
C12orf60-201ENST00000330828 ZBTB47Q9UFB7 747 aaPredicted RBP8.97□□□□□ -0.97
C12orf60-201ENST00000330828 NUBP1P53384 320 aa8.97□□□□□ -0.97
C12orf60-201ENST00000330828 CSRNP3Q8WYN3 585 aa8.96□□□□□ -0.98
C12orf60-201ENST00000330828 L3MBTL3Q96JM7 780 aaPredicted RBP8.96□□□□□ -0.98
C12orf60-201ENST00000330828 NACADO15069 1562 aa8.94□□□□□ -0.98
C12orf60-201ENST00000330828 FAM212AQ96EL1 285 aa8.94□□□□□ -0.98
C12orf60-201ENST00000330828 PDCD7Q8N8D1 485 aaKnown RBP8.92□□□□□ -0.98
C12orf60-201ENST00000330828 PLCD3Q8N3E9 789 aa8.89□□□□□ -0.99
C12orf60-201ENST00000330828 MYT1LQ9UL68 1186 aa8.88□□□□□ -0.99
C12orf60-201ENST00000330828 SLC24A1O60721 1099 aa8.85□□□□□ -0.99
C12orf60-201ENST00000330828 HOXB1P14653 301 aaPredicted RBP8.85□□□□□ -0.99
C12orf60-201ENST00000330828 PTGER2P43116 358 aa8.85□□□□□ -0.99
C12orf60-201ENST00000330828 MKRN3Q13064 507 aaKnown RBP8.81□□□□□ -1
C12orf60-201ENST00000330828 ERBB3P21860 1342 aa8.81□□□□□ -1
C12orf60-201ENST00000330828 HOXB3P14651 431 aaPredicted RBP8.81□□□□□ -1
C12orf60-201ENST00000330828 GOLGA2Q08379 1002 aa8.78□□□□□ -1
C12orf60-201ENST00000330828 ZNF710Q8N1W2 664 aa8.78□□□□□ -1
C12orf60-201ENST00000330828 PCDHB8Q9UN66 801 aa8.78□□□□□ -1
C12orf60-201ENST00000330828 MYO15BQ96JP2 1530 aa8.78□□□□□ -1
C12orf60-201ENST00000330828 DOK7Q18PE1 504 aa8.77□□□□□ -1.01
C12orf60-201ENST00000330828 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.77□□□□□ -1.01
C12orf60-201ENST00000330828 PYGBP11216 843 aa8.75□□□□□ -1.01
C12orf60-201ENST00000330828 ILDR1Q86SU0 546 aaPredicted RBP8.75□□□□□ -1.01
C12orf60-201ENST00000330828 DCAF8Q5TAQ9 597 aa8.72□□□□□ -1.01
C12orf60-201ENST00000330828 ZNF467Q7Z7K2 595 aaPredicted RBP8.72□□□□□ -1.01
C12orf60-201ENST00000330828 ZNF687Q8N1G0 1237 aa8.72□□□□□ -1.01
C12orf60-201ENST00000330828 RIMBP2O15034 1052 aa8.72□□□□□ -1.01
C12orf60-201ENST00000330828 VARS2Q5ST30 1063 aaKnown RBP8.72□□□□□ -1.01
C12orf60-201ENST00000330828 G3V3G9 751 aa8.69□□□□□ -1.02
C12orf60-201ENST00000330828 BICRAQ9NZM4 1560 aa8.68□□□□□ -1.02
C12orf60-201ENST00000330828 ZSWIM6Q9HCJ5 1215 aa8.68□□□□□ -1.02
C12orf60-201ENST00000330828 BOLA1Q9Y3E2 137 aa8.68□□□□□ -1.02
C12orf60-201ENST00000330828 SHROOM4Q9ULL8 1493 aa8.67□□□□□ -1.02
C12orf60-201ENST00000330828 CECR2Q9BXF3 1484 aa8.66□□□□□ -1.02
C12orf60-201ENST00000330828 PLA2G2EQ9NZK7 142 aa8.63□□□□□ -1.03
C12orf60-201ENST00000330828 PSEN1P49768 467 aa8.62□□□□□ -1.03
C12orf60-201ENST00000330828 DPY19L2Q6NUT2 758 aa8.62□□□□□ -1.03
C12orf60-201ENST00000330828 DNAJC5Q9H3Z4 198 aa8.62□□□□□ -1.03
C12orf60-201ENST00000330828 UNC13AQ9UPW8 1703 aa8.61□□□□□ -1.03
C12orf60-201ENST00000330828 CHRM1P11229 460 aaPredicted RBP8.6□□□□□ -1.03
C12orf60-201ENST00000330828 DCAF1Q9Y4B6 1507 aa8.59□□□□□ -1.04
C12orf60-201ENST00000330828 CC2D2AQ9P2K1 1620 aa8.58□□□□□ -1.04
C12orf60-201ENST00000330828 GSE1Q14687 1217 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms