RNA–Protein interactions for RNA: ENST00000318962.8

ALS2CL-201, Transcript of ALS2 C-terminal like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALS2CL, Length 4,741 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALS2CL-201ENST00000318962 TMC1Q8TDI8 760 aa15.98■□□□□ 0.15
ALS2CL-201ENST00000318962 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.97■□□□□ 0.15
ALS2CL-201ENST00000318962 ANP32BQ92688 251 aaKnown RBP15.95■□□□□ 0.14
ALS2CL-201ENST00000318962 STAG3Q9UJ98 1225 aa15.95■□□□□ 0.14
ALS2CL-201ENST00000318962 CCDC136Q96JN2 1154 aa15.94■□□□□ 0.14
ALS2CL-201ENST00000318962 MRS2Q9HD23 443 aa15.94■□□□□ 0.14
ALS2CL-201ENST00000318962 PLEKHD1A6NEE1 506 aa15.93■□□□□ 0.14
ALS2CL-201ENST00000318962 EIF4G2P78344 907 aaKnown RBP eCLIP15.93■□□□□ 0.14
ALS2CL-201ENST00000318962 RRP7BPQ9NSQ0 103 aa15.9■□□□□ 0.14
ALS2CL-201ENST00000318962 KDM2AQ9Y2K7 1162 aa15.9■□□□□ 0.14
ALS2CL-201ENST00000318962 SALL2Q9Y467 1007 aaPredicted RBP15.88■□□□□ 0.13
ALS2CL-201ENST00000318962 TIMELESSQ9UNS1 1208 aa15.87■□□□□ 0.13
ALS2CL-201ENST00000318962 MROH2BQ7Z745 1585 aa15.86■□□□□ 0.13
ALS2CL-201ENST00000318962 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.86■□□□□ 0.13
ALS2CL-201ENST00000318962 HIRIP3Q9BW71 556 aaPredicted RBP15.86■□□□□ 0.13
ALS2CL-201ENST00000318962 WDR43Q15061 677 aaKnown RBP eCLIP15.86■□□□□ 0.13
ALS2CL-201ENST00000318962 FHAD1B1AJZ9 1412 aa15.85■□□□□ 0.13
ALS2CL-201ENST00000318962 UPF2Q9HAU5 1272 aaKnown RBP15.84■□□□□ 0.13
ALS2CL-201ENST00000318962 SMARCA2P51531 1590 aa15.84■□□□□ 0.13
ALS2CL-201ENST00000318962 IRX6P78412 446 aaPredicted RBP15.83■□□□□ 0.12
ALS2CL-201ENST00000318962 CCDC88BA6NC98 1476 aa15.82■□□□□ 0.12
ALS2CL-201ENST00000318962 CCER2I3L3R5 266 aa15.81■□□□□ 0.12
ALS2CL-201ENST00000318962 CARMIL1Q5VZK9 1371 aa15.81■□□□□ 0.12
ALS2CL-201ENST00000318962 CFDP1Q9UEE9 299 aaPredicted RBP15.8■□□□□ 0.12
ALS2CL-201ENST00000318962 VPS8Q8N3P4 1428 aa15.8■□□□□ 0.12
ALS2CL-201ENST00000318962 ERICH6BQ5W0A0 696 aa15.79■□□□□ 0.12
ALS2CL-201ENST00000318962 RTN4Q9NQC3 1192 aaKnown RBP15.78■□□□□ 0.12
ALS2CL-201ENST00000318962 PPP4R2Q9NY27 417 aa15.78■□□□□ 0.12
ALS2CL-201ENST00000318962 SOGA1O94964 1423 aa15.78■□□□□ 0.12
ALS2CL-201ENST00000318962 DEKP35659 375 aaKnown RBP15.77■□□□□ 0.12
ALS2CL-201ENST00000318962 CUX2O14529 1486 aa15.77■□□□□ 0.12
ALS2CL-201ENST00000318962 HSP90AA1P07900 732 aaKnown RBP15.76■□□□□ 0.11
ALS2CL-201ENST00000318962 PPM1GO15355 546 aaPredicted RBP15.75■□□□□ 0.11
ALS2CL-201ENST00000318962 NOP58Q9Y2X3 529 aaKnown RBP15.75■□□□□ 0.11
ALS2CL-201ENST00000318962 DDRGK1Q96HY6 314 aa15.75■□□□□ 0.11
ALS2CL-201ENST00000318962 KCNH8Q96L42 1107 aa15.73■□□□□ 0.11
ALS2CL-201ENST00000318962 ARXQ96QS3 562 aa15.73■□□□□ 0.11
ALS2CL-201ENST00000318962 RBM19Q9Y4C8 960 aaKnown RBP15.73■□□□□ 0.11
ALS2CL-201ENST00000318962 CCNB3Q8WWL7 1395 aa15.73■□□□□ 0.11
ALS2CL-201ENST00000318962 ERCC6Q03468 1493 aa15.73■□□□□ 0.11
ALS2CL-201ENST00000318962 TSHZ2Q9NRE2 1034 aa15.73■□□□□ 0.11
ALS2CL-201ENST00000318962 TOP2AP11388 1531 aaKnown RBP15.71■□□□□ 0.11
ALS2CL-201ENST00000318962 RGL3Q3MIN7 710 aa15.69■□□□□ 0.1
ALS2CL-201ENST00000318962 PDS5BQ9NTI5 1447 aa15.68■□□□□ 0.1
ALS2CL-201ENST00000318962 CDCA8Q53HL2 280 aa15.67■□□□□ 0.1
ALS2CL-201ENST00000318962 PLPPR3Q6T4P5 718 aa15.67■□□□□ 0.1
ALS2CL-201ENST00000318962 SIN3AQ96ST3 1273 aa15.65■□□□□ 0.1
ALS2CL-201ENST00000318962 TRIM44Q96DX7 344 aaPredicted RBP15.64■□□□□ 0.09
ALS2CL-201ENST00000318962 CARD11Q9BXL7 1154 aa15.64■□□□□ 0.09
ALS2CL-201ENST00000318962 ABCC8Q09428 1581 aa15.62■□□□□ 0.09
ALS2CL-201ENST00000318962 TNNT2P45379 298 aaPredicted RBP15.61■□□□□ 0.09
ALS2CL-201ENST00000318962 NAP1L5Q96NT1 182 aaPredicted RBP15.6■□□□□ 0.09
ALS2CL-201ENST00000318962 KNSTRNQ9Y448 316 aa15.6■□□□□ 0.09
ALS2CL-201ENST00000318962 SETD5Q9C0A6 1442 aa15.6■□□□□ 0.09
ALS2CL-201ENST00000318962 BECN1Q14457 450 aa15.59■□□□□ 0.09
ALS2CL-201ENST00000318962 LAS1LQ9Y4W2 734 aaKnown RBP15.59■□□□□ 0.09
ALS2CL-201ENST00000318962 CADPSQ9ULU8 1353 aa15.58■□□□□ 0.09
ALS2CL-201ENST00000318962 PPP1R15AO75807 674 aaPredicted RBP15.58■□□□□ 0.09
ALS2CL-201ENST00000318962 MYH16Q9H6N6 1097 aa15.58■□□□□ 0.08
ALS2CL-201ENST00000318962 WIZO95785 1651 aa15.58■□□□□ 0.08
ALS2CL-201ENST00000318962 CFAP53Q96M91 514 aa15.58■□□□□ 0.08
ALS2CL-201ENST00000318962 FMN1Q68DA7 1419 aa15.57■□□□□ 0.08
ALS2CL-201ENST00000318962 ATAD2BQ9ULI0 1458 aa15.56■□□□□ 0.08
ALS2CL-201ENST00000318962 EIF4G1Q04637 1599 aaKnown RBP15.56■□□□□ 0.08
ALS2CL-201ENST00000318962 ARHGAP35Q9NRY4 1499 aa15.55■□□□□ 0.08
ALS2CL-201ENST00000318962 CARMIL2Q6F5E8 1435 aa15.54■□□□□ 0.08
ALS2CL-201ENST00000318962 SMARCA4P51532 1647 aa15.5■□□□□ 0.07
ALS2CL-201ENST00000318962 DHX57Q6P158 1386 aaKnown RBP15.5■□□□□ 0.07
ALS2CL-201ENST00000318962 TDRD9Q8NDG6 1382 aaKnown RBP15.49■□□□□ 0.07
ALS2CL-201ENST00000318962 RAB3GAP2Q9H2M9 1393 aa15.48■□□□□ 0.07
ALS2CL-201ENST00000318962 KANK4Q5T7N3 995 aaPredicted RBP15.48■□□□□ 0.07
ALS2CL-201ENST00000318962 RAPGEF2Q9Y4G8 1499 aa15.48■□□□□ 0.07
ALS2CL-201ENST00000318962 SENP3Q9H4L4 574 aaPredicted RBP15.48■□□□□ 0.07
ALS2CL-201ENST00000318962 B4GALNT3Q6L9W6 998 aa15.47■□□□□ 0.07
ALS2CL-201ENST00000318962 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.47■□□□□ 0.07
ALS2CL-201ENST00000318962 SENP3-EIF4A1A0A087X0R7 540 aa15.46■□□□□ 0.06
ALS2CL-201ENST00000318962 KANK1Q14678 1352 aa15.45■□□□□ 0.06
ALS2CL-201ENST00000318962 DCAF11Q8TEB1 546 aa15.44■□□□□ 0.06
ALS2CL-201ENST00000318962 NUDCQ9Y266 331 aa15.43■□□□□ 0.06
ALS2CL-201ENST00000318962 FANCIQ9NVI1 1328 aa15.43■□□□□ 0.06
ALS2CL-201ENST00000318962 GOLGA6L22H0YM25 854 aa15.42■□□□□ 0.06
ALS2CL-201ENST00000318962 TMF1P82094 1093 aa15.42■□□□□ 0.06
ALS2CL-201ENST00000318962 C14orf37Q86TY3 774 aa15.42■□□□□ 0.06
ALS2CL-201ENST00000318962 MAPK8IP3Q9UPT6 1336 aa15.41■□□□□ 0.06
ALS2CL-201ENST00000318962 FTSJ3Q8IY81 847 aaKnown RBP15.4■□□□□ 0.06
ALS2CL-201ENST00000318962 POGKQ9P215 609 aa15.39■□□□□ 0.05
ALS2CL-201ENST00000318962 NEUROD2Q15784 382 aa15.39■□□□□ 0.05
ALS2CL-201ENST00000318962 L1TD1Q5T7N2 865 aaKnown RBP15.38■□□□□ 0.05
ALS2CL-201ENST00000318962 CC2D1BQ5T0F9 858 aaKnown RBP15.38■□□□□ 0.05
ALS2CL-201ENST00000318962 ARID4BQ4LE39 1312 aaPredicted RBP15.38■□□□□ 0.05
ALS2CL-201ENST00000318962 HSPA5P11021 654 aaKnown RBP15.37■□□□□ 0.05
ALS2CL-201ENST00000318962 ZBTB7CA1YPR0 619 aa15.36■□□□□ 0.05
ALS2CL-201ENST00000318962 RSPH4AQ5TD94 716 aa15.36■□□□□ 0.05
ALS2CL-201ENST00000318962 EFCAB2Q5VUJ9 269 aa15.36■□□□□ 0.05
ALS2CL-201ENST00000318962 PKD2Q13563 968 aa15.36■□□□□ 0.05
ALS2CL-201ENST00000318962 ANKRD30AQ9BXX3 1397 aa15.36■□□□□ 0.05
ALS2CL-201ENST00000318962 TCERG1O14776 1098 aaKnown RBP15.35■□□□□ 0.05
ALS2CL-201ENST00000318962 CDK11BP21127 795 aaKnown RBP15.34■□□□□ 0.05
ALS2CL-201ENST00000318962 HDGFP51858 240 aaKnown RBP15.33■□□□□ 0.05
ALS2CL-201ENST00000318962 IPO9Q96P70 1041 aaKnown RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms