RNA–Protein interactions for RNA: ENST00000317233.8

AFF3-201, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF3, Length 8,135 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-201ENST00000317233 KIAA2012Q0VF49 1180 aa17.32■□□□□ 0.36
AFF3-201ENST00000317233 TMC1Q8TDI8 760 aa17.31■□□□□ 0.36
AFF3-201ENST00000317233 LOC105371045A0A1W2PR82 267 aa17.31■□□□□ 0.36
AFF3-201ENST00000317233 NPM1P06748 294 aaKnown RBP eCLIP17.3■□□□□ 0.36
AFF3-201ENST00000317233 FKBP8Q14318 412 aa17.3■□□□□ 0.36
AFF3-201ENST00000317233 PLCB2Q00722 1185 aa17.3■□□□□ 0.36
AFF3-201ENST00000317233 AMER1Q5JTC6 1135 aaPredicted RBP17.29■□□□□ 0.36
AFF3-201ENST00000317233 FGD1P98174 961 aa17.28■□□□□ 0.36
AFF3-201ENST00000317233 CHAF1AQ13111 956 aaPredicted RBP17.28■□□□□ 0.36
AFF3-201ENST00000317233 DDRGK1Q96HY6 314 aa17.27■□□□□ 0.36
AFF3-201ENST00000317233 FAM9BQ8IZU0 186 aa17.27■□□□□ 0.36
AFF3-201ENST00000317233 HNRNPUQ00839 825 aaKnown RBP eCLIP17.26■□□□□ 0.35
AFF3-201ENST00000317233 PNNQ9H307 717 aaKnown RBP17.26■□□□□ 0.35
AFF3-201ENST00000317233 ARID3CA6NKF2 412 aa17.23■□□□□ 0.35
AFF3-201ENST00000317233 NAP1L2Q9ULW6 460 aaPredicted RBP17.22■□□□□ 0.35
AFF3-201ENST00000317233 NAP1L5Q96NT1 182 aaPredicted RBP17.22■□□□□ 0.35
AFF3-201ENST00000317233 ISY1Q9ULR0 285 aaKnown RBP17.21■□□□□ 0.35
AFF3-201ENST00000317233 ERICH6BQ5W0A0 696 aa17.17■□□□□ 0.34
AFF3-201ENST00000317233 A0A0U1RQG5 324 aaPredicted RBP17.15■□□□□ 0.34
AFF3-201ENST00000317233 KCNJ4P48050 445 aa17.15■□□□□ 0.34
AFF3-201ENST00000317233 TONSLQ96HA7 1378 aa17.14■□□□□ 0.33
AFF3-201ENST00000317233 GOLGA6L4A6NEF3 574 aa17.14■□□□□ 0.33
AFF3-201ENST00000317233 DRC7Q8IY82 874 aa17.11■□□□□ 0.33
AFF3-201ENST00000317233 PPP1R15AO75807 674 aaPredicted RBP17.1■□□□□ 0.33
AFF3-201ENST00000317233 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.09■□□□□ 0.33
AFF3-201ENST00000317233 OS9Q13438 667 aaPredicted RBP17.09■□□□□ 0.33
AFF3-201ENST00000317233 FTSJ3Q8IY81 847 aaKnown RBP17.09■□□□□ 0.33
AFF3-201ENST00000317233 GNL2Q13823 731 aaKnown RBP17.07■□□□□ 0.32
AFF3-201ENST00000317233 EIF4G2P78344 907 aaKnown RBP eCLIP17.06■□□□□ 0.32
AFF3-201ENST00000317233 TNNT3P45378 269 aaPredicted RBP17.06■□□□□ 0.32
AFF3-201ENST00000317233 CALRP27797 417 aaKnown RBP17.04■□□□□ 0.32
AFF3-201ENST00000317233 P3H3Q8IVL6 736 aa17.02■□□□□ 0.32
AFF3-201ENST00000317233 GOLGA6L1Q8N7Z2 621 aa17.01■□□□□ 0.31
AFF3-201ENST00000317233 MSNP26038 577 aaKnown RBP17.01■□□□□ 0.31
AFF3-201ENST00000317233 TMX4Q9H1E5 349 aaPredicted RBP17.01■□□□□ 0.31
AFF3-201ENST00000317233 HSP90AB1P08238 724 aaKnown RBP17.01■□□□□ 0.31
AFF3-201ENST00000317233 PDE4CQ08493 712 aa17■□□□□ 0.31
AFF3-201ENST00000317233 USP35Q9P2H5 1018 aa17■□□□□ 0.31
AFF3-201ENST00000317233 CEP89Q96ST8 783 aa16.99■□□□□ 0.31
AFF3-201ENST00000317233 LMOD2Q6P5Q4 547 aa16.98■□□□□ 0.31
AFF3-201ENST00000317233 PPM1GO15355 546 aaPredicted RBP16.98■□□□□ 0.31
AFF3-201ENST00000317233 ACIN1Q9UKV3 1341 aaKnown RBP16.97■□□□□ 0.31
AFF3-201ENST00000317233 CFAP53Q96M91 514 aa16.96■□□□□ 0.31
AFF3-201ENST00000317233 SENP3Q9H4L4 574 aaPredicted RBP16.96■□□□□ 0.31
AFF3-201ENST00000317233 KDM2AQ9Y2K7 1162 aa16.96■□□□□ 0.3
AFF3-201ENST00000317233 FBXO3Q9UK99 471 aa16.95■□□□□ 0.3
AFF3-201ENST00000317233 LAS1LQ9Y4W2 734 aaKnown RBP16.95■□□□□ 0.3
AFF3-201ENST00000317233 CHMP4BQ9H444 224 aaKnown RBP16.92■□□□□ 0.3
AFF3-201ENST00000317233 MRS2Q9HD23 443 aa16.92■□□□□ 0.3
AFF3-201ENST00000317233 DDX10Q13206 875 aaKnown RBP16.91■□□□□ 0.3
AFF3-201ENST00000317233 ARID4BQ4LE39 1312 aaPredicted RBP16.9■□□□□ 0.3
AFF3-201ENST00000317233 CNKSR2Q8WXI2 1034 aa16.89■□□□□ 0.29
AFF3-201ENST00000317233 MCCP23508 829 aa16.89■□□□□ 0.29
AFF3-201ENST00000317233 SETQ01105 290 aaPredicted RBP16.88■□□□□ 0.29
AFF3-201ENST00000317233 CCDC34Q96HJ3 373 aa16.86■□□□□ 0.29
AFF3-201ENST00000317233 TPM4P67936 248 aa16.84■□□□□ 0.29
AFF3-201ENST00000317233 MAPK8IP3Q9UPT6 1336 aa16.83■□□□□ 0.29
AFF3-201ENST00000317233 IRX6P78412 446 aaPredicted RBP16.82■□□□□ 0.28
AFF3-201ENST00000317233 TSPY4P0CV99 314 aa16.81■□□□□ 0.28
AFF3-201ENST00000317233 TSPY10P0CW01 314 aa16.81■□□□□ 0.28
AFF3-201ENST00000317233 G3V3G9 751 aa16.8■□□□□ 0.28
AFF3-201ENST00000317233 DCAF8Q5TAQ9 597 aa16.8■□□□□ 0.28
AFF3-201ENST00000317233 RTN4Q9NQC3 1192 aaKnown RBP16.8■□□□□ 0.28
AFF3-201ENST00000317233 ANO8Q9HCE9 1232 aaPredicted RBP16.79■□□□□ 0.28
AFF3-201ENST00000317233 HSCBQ8IWL3 235 aa16.78■□□□□ 0.28
AFF3-201ENST00000317233 RRP12Q5JTH9 1297 aaKnown RBP16.77■□□□□ 0.28
AFF3-201ENST00000317233 HTATSF1O43719 755 aaKnown RBP16.76■□□□□ 0.27
AFF3-201ENST00000317233 KIAA1211Q6ZU35 1233 aa16.76■□□□□ 0.27
AFF3-201ENST00000317233 RASSF8Q8NHQ8 419 aa16.75■□□□□ 0.27
AFF3-201ENST00000317233 MS4A1P11836 297 aa16.75■□□□□ 0.27
AFF3-201ENST00000317233 NUDCQ9Y266 331 aa16.75■□□□□ 0.27
AFF3-201ENST00000317233 CFAP44Q96MT7 982 aa16.75■□□□□ 0.27
AFF3-201ENST00000317233 VPS53Q5VIR6 699 aa16.74■□□□□ 0.27
AFF3-201ENST00000317233 CDCA8Q53HL2 280 aa16.74■□□□□ 0.27
AFF3-201ENST00000317233 KNSTRNQ9Y448 316 aa16.74■□□□□ 0.27
AFF3-201ENST00000317233 CREBRFQ8IUR6 639 aa16.73■□□□□ 0.27
AFF3-201ENST00000317233 WWC1Q8IX03 1113 aa16.73■□□□□ 0.27
AFF3-201ENST00000317233 PATL2C9JE40 543 aaKnown RBP16.71■□□□□ 0.27
AFF3-201ENST00000317233 TPM3P06753 285 aa16.71■□□□□ 0.27
AFF3-201ENST00000317233 NEUROD2Q15784 382 aa16.68■□□□□ 0.26
AFF3-201ENST00000317233 ARID3AQ99856 593 aa16.68■□□□□ 0.26
AFF3-201ENST00000317233 CHIC2Q9UKJ5 165 aa16.67■□□□□ 0.26
AFF3-201ENST00000317233 MARCH6O60337 910 aa16.67■□□□□ 0.26
AFF3-201ENST00000317233 FRAT1Q92837 279 aaPredicted RBP16.67■□□□□ 0.26
AFF3-201ENST00000317233 TCEAL9Q9UHQ7 104 aa16.67■□□□□ 0.26
AFF3-201ENST00000317233 RGS3P49796 1198 aa16.66■□□□□ 0.26
AFF3-201ENST00000317233 TSR1Q2NL82 804 aaKnown RBP16.66■□□□□ 0.26
AFF3-201ENST00000317233 SYAP1Q96A49 352 aaPredicted RBP16.66■□□□□ 0.26
AFF3-201ENST00000317233 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.65■□□□□ 0.26
AFF3-201ENST00000317233 POGKQ9P215 609 aa16.65■□□□□ 0.26
AFF3-201ENST00000317233 PTMSP20962 102 aa16.64■□□□□ 0.26
AFF3-201ENST00000317233 HSP90B1P14625 803 aaKnown RBP16.64■□□□□ 0.25
AFF3-201ENST00000317233 PABPN1Q86U42 306 aaKnown RBP eCLIP16.63■□□□□ 0.25
AFF3-201ENST00000317233 PES1O00541 588 aaKnown RBP16.62■□□□□ 0.25
AFF3-201ENST00000317233 GORABQ5T7V8 394 aa16.62■□□□□ 0.25
AFF3-201ENST00000317233 CCDC70Q6NSX1 233 aa16.62■□□□□ 0.25
AFF3-201ENST00000317233 KAT6BQ8WYB5 2073 aa16.61■□□□□ 0.25
AFF3-201ENST00000317233 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.59■□□□□ 0.25
AFF3-201ENST00000317233 RTF1Q92541 710 aaKnown RBP16.59■□□□□ 0.25
AFF3-201ENST00000317233 ZNF330Q9Y3S2 320 aaPredicted RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms