RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 NOP58Q9Y2X3 529 aaKnown RBP5.98□□□□□ -1.45
CNOT1-201ENST00000317147 PPP4R2Q9NY27 417 aa5.98□□□□□ -1.45
CNOT1-201ENST00000317147 DDX10Q13206 875 aaKnown RBP5.97□□□□□ -1.45
CNOT1-201ENST00000317147 NEFMP07197 916 aa5.96□□□□□ -1.45
CNOT1-201ENST00000317147 WIZO95785 1651 aa5.96□□□□□ -1.46
CNOT1-201ENST00000317147 SETD1BQ9UPS6 1966 aaKnown RBP5.96□□□□□ -1.46
CNOT1-201ENST00000317147 CCDC136Q96JN2 1154 aa5.95□□□□□ -1.46
CNOT1-201ENST00000317147 CFAP44Q96MT7 982 aa5.95□□□□□ -1.46
CNOT1-201ENST00000317147 FHAD1B1AJZ9 1412 aa5.95□□□□□ -1.46
CNOT1-201ENST00000317147 MICAL3Q7RTP6 2002 aa5.95□□□□□ -1.46
CNOT1-201ENST00000317147 BICRAQ9NZM4 1560 aa5.95□□□□□ -1.46
CNOT1-201ENST00000317147 GOLGA6L22H0YM25 854 aa5.94□□□□□ -1.46
CNOT1-201ENST00000317147 PEG3Q9GZU2 1588 aa5.94□□□□□ -1.46
CNOT1-201ENST00000317147 VPS8Q8N3P4 1428 aa5.94□□□□□ -1.46
CNOT1-201ENST00000317147 SLC24A1O60721 1099 aa5.94□□□□□ -1.46
CNOT1-201ENST00000317147 IRX6P78412 446 aaPredicted RBP5.94□□□□□ -1.46
CNOT1-201ENST00000317147 HIRIP3Q9BW71 556 aaPredicted RBP5.94□□□□□ -1.46
CNOT1-201ENST00000317147 FAM50AQ14320 339 aaKnown RBP5.93□□□□□ -1.46
CNOT1-201ENST00000317147 ZNF326Q5BKZ1 582 aaKnown RBP5.93□□□□□ -1.46
CNOT1-201ENST00000317147 CECR2Q9BXF3 1484 aa5.92□□□□□ -1.46
CNOT1-201ENST00000317147 HNRNPUQ00839 825 aaKnown RBP eCLIP5.92□□□□□ -1.46
CNOT1-201ENST00000317147 MTERF4Q7Z6M4 381 aaKnown RBP5.92□□□□□ -1.46
CNOT1-201ENST00000317147 MYO10Q9HD67 2058 aa5.92□□□□□ -1.46
CNOT1-201ENST00000317147 ABCC8Q09428 1581 aa5.91□□□□□ -1.46
CNOT1-201ENST00000317147 PHLDB1Q86UU1 1377 aa5.91□□□□□ -1.46
CNOT1-201ENST00000317147 KIF21BO75037 1637 aa5.91□□□□□ -1.46
CNOT1-201ENST00000317147 TSHZ2Q9NRE2 1034 aa5.9□□□□□ -1.46
CNOT1-201ENST00000317147 RBM19Q9Y4C8 960 aaKnown RBP5.9□□□□□ -1.46
CNOT1-201ENST00000317147 CHMP4BQ9H444 224 aaKnown RBP5.9□□□□□ -1.46
CNOT1-201ENST00000317147 MYH10P35580 1976 aa5.89□□□□□ -1.47
CNOT1-201ENST00000317147 MROH2BQ7Z745 1585 aa5.89□□□□□ -1.47
CNOT1-201ENST00000317147 ROCK2O75116 1388 aaKnown RBP5.89□□□□□ -1.47
CNOT1-201ENST00000317147 DEKP35659 375 aaKnown RBP5.88□□□□□ -1.47
CNOT1-201ENST00000317147 MAP7D2Q96T17 732 aa5.88□□□□□ -1.47
CNOT1-201ENST00000317147 TCERG1O14776 1098 aaKnown RBP5.88□□□□□ -1.47
CNOT1-201ENST00000317147 KCNH8Q96L42 1107 aa5.88□□□□□ -1.47
CNOT1-201ENST00000317147 TOP2AP11388 1531 aaKnown RBP5.88□□□□□ -1.47
CNOT1-201ENST00000317147 ISY1Q9ULR0 285 aaKnown RBP5.87□□□□□ -1.47
CNOT1-201ENST00000317147 LAS1LQ9Y4W2 734 aaKnown RBP5.87□□□□□ -1.47
CNOT1-201ENST00000317147 HSP90AA1P07900 732 aaKnown RBP5.87□□□□□ -1.47
CNOT1-201ENST00000317147 NPM2Q86SE8 214 aaKnown RBP5.87□□□□□ -1.47
CNOT1-201ENST00000317147 KTN1Q86UP2 1357 aaKnown RBP5.86□□□□□ -1.47
CNOT1-201ENST00000317147 MS4A1P11836 297 aa5.86□□□□□ -1.47
CNOT1-201ENST00000317147 CANXP27824 592 aaKnown RBP5.86□□□□□ -1.47
CNOT1-201ENST00000317147 CCNB3Q8WWL7 1395 aa5.86□□□□□ -1.47
CNOT1-201ENST00000317147 ANKRD12Q6UB98 2062 aa5.86□□□□□ -1.47
CNOT1-201ENST00000317147 RTN4Q9NQC3 1192 aaKnown RBP5.86□□□□□ -1.47
CNOT1-201ENST00000317147 CDK11BP21127 795 aaKnown RBP5.86□□□□□ -1.47
CNOT1-201ENST00000317147 EIF4G2P78344 907 aaKnown RBP eCLIP5.86□□□□□ -1.476e-11■■■■□ 25.1
CNOT1-201ENST00000317147 IPO9Q96P70 1041 aaKnown RBP5.85□□□□□ -1.47
CNOT1-201ENST00000317147 CHAF1AQ13111 956 aaPredicted RBP5.85□□□□□ -1.47
CNOT1-201ENST00000317147 AAMPQ13685 434 aa5.85□□□□□ -1.47
CNOT1-201ENST00000317147 ERICH3Q5RHP9 1530 aa5.84□□□□□ -1.47
CNOT1-201ENST00000317147 KIF27Q86VH2 1401 aa5.84□□□□□ -1.47
CNOT1-201ENST00000317147 FAM9BQ8IZU0 186 aa5.84□□□□□ -1.47
CNOT1-201ENST00000317147 SMARCA2P51531 1590 aa5.83□□□□□ -1.48
CNOT1-201ENST00000317147 CDCA8Q53HL2 280 aa5.83□□□□□ -1.48
CNOT1-201ENST00000317147 PNNQ9H307 717 aaKnown RBP5.83□□□□□ -1.48
CNOT1-201ENST00000317147 PDE3BQ13370 1112 aa5.83□□□□□ -1.48
CNOT1-201ENST00000317147 NGEFQ8N5V2 710 aa5.83□□□□□ -1.48
CNOT1-201ENST00000317147 SMARCA4P51532 1647 aa5.83□□□□□ -1.48
CNOT1-201ENST00000317147 MRS2Q9HD23 443 aa5.83□□□□□ -1.48
CNOT1-201ENST00000317147 SETD5Q9C0A6 1442 aa5.82□□□□□ -1.48
CNOT1-201ENST00000317147 CUX1P39880 1505 aa5.82□□□□□ -1.48
CNOT1-201ENST00000317147 NRDCO43847 1150 aa5.81□□□□□ -1.48
CNOT1-201ENST00000317147 TMC1Q8TDI8 760 aa5.81□□□□□ -1.48
CNOT1-201ENST00000317147 TAF3Q5VWG9 929 aa5.81□□□□□ -1.48
CNOT1-201ENST00000317147 B4GALNT3Q6L9W6 998 aa5.81□□□□□ -1.48
CNOT1-201ENST00000317147 CCDC88BA6NC98 1476 aa5.81□□□□□ -1.48
CNOT1-201ENST00000317147 ARHGAP35Q9NRY4 1499 aa5.81□□□□□ -1.48
CNOT1-201ENST00000317147 EIF3AQ14152 1382 aaKnown RBP5.81□□□□□ -1.48
CNOT1-201ENST00000317147 ZBED9Q6R2W3 1325 aa5.81□□□□□ -1.48
CNOT1-201ENST00000317147 SENP3-EIF4A1A0A087X0R7 540 aa5.8□□□□□ -1.48
CNOT1-201ENST00000317147 GOLGA6L6A8MZA4 724 aa5.8□□□□□ -1.48
CNOT1-201ENST00000317147 SOGA1O94964 1423 aa5.8□□□□□ -1.48
CNOT1-201ENST00000317147 MSNP26038 577 aaKnown RBP5.8□□□□□ -1.48
CNOT1-201ENST00000317147 HSP90AA2PQ14568 343 aaPredicted RBP5.79□□□□□ -1.48
CNOT1-201ENST00000317147 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.79□□□□□ -1.48
CNOT1-201ENST00000317147 NAP1L5Q96NT1 182 aaPredicted RBP5.79□□□□□ -1.48
CNOT1-201ENST00000317147 PDE4DIPQ5VU43 2346 aa5.79□□□□□ -1.48
CNOT1-201ENST00000317147 SKOR2Q2VWA4 1001 aaPredicted RBP5.79□□□□□ -1.48
CNOT1-201ENST00000317147 CCDC18Q5T9S5 1454 aa5.79□□□□□ -1.48
CNOT1-201ENST00000317147 GBP4Q96PP9 640 aa5.78□□□□□ -1.48
CNOT1-201ENST00000317147 SALL2Q9Y467 1007 aaPredicted RBP5.78□□□□□ -1.48
CNOT1-201ENST00000317147 EIF4G1Q04637 1599 aaKnown RBP5.78□□□□□ -1.48
CNOT1-201ENST00000317147 DDX11L8A8MPP1 907 aa5.78□□□□□ -1.48
CNOT1-201ENST00000317147 CASC1Q6TDU7 716 aa5.78□□□□□ -1.48
CNOT1-201ENST00000317147 P3H3Q8IVL6 736 aa5.78□□□□□ -1.48
CNOT1-201ENST00000317147 FMN1Q68DA7 1419 aa5.78□□□□□ -1.48
CNOT1-201ENST00000317147 RRP9O43818 475 aaKnown RBP5.78□□□□□ -1.48
CNOT1-201ENST00000317147 MYH16Q9H6N6 1097 aa5.78□□□□□ -1.48
CNOT1-201ENST00000317147 SYAP1Q96A49 352 aaPredicted RBP5.77□□□□□ -1.49
CNOT1-201ENST00000317147 GOLGA6L3A6NEY3 463 aa5.77□□□□□ -1.49
CNOT1-201ENST00000317147 MTUS2Q5JR59 1369 aa5.77□□□□□ -1.49
CNOT1-201ENST00000317147 CNTRLQ7Z7A1 2325 aa5.77□□□□□ -1.49
CNOT1-201ENST00000317147 GSE1Q14687 1217 aa5.77□□□□□ -1.49
CNOT1-201ENST00000317147 CSPP1Q1MSJ5 1256 aa5.77□□□□□ -1.49
CNOT1-201ENST00000317147 PABPN1Q86U42 306 aaKnown RBP eCLIP5.77□□□□□ -1.493e-7■□□□□ 8.9
CNOT1-201ENST00000317147 NCAPD3P42695 1498 aa5.77□□□□□ -1.49
CNOT1-201ENST00000317147 MAP3K1Q13233 1512 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms