RNA–Protein interactions for RNA: ENST00000314845.7

AMBRA1-201, Transcript of autophagy and beclin 1 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AMBRA1, Length 5,023 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-201ENST00000314845 MRS2Q9HD23 443 aa16.05■□□□□ 0.16
AMBRA1-201ENST00000314845 HSP90AA1P07900 732 aaKnown RBP16.03■□□□□ 0.16
AMBRA1-201ENST00000314845 PPP1R15AO75807 674 aaPredicted RBP16.02■□□□□ 0.16
AMBRA1-201ENST00000314845 CFDP1Q9UEE9 299 aaPredicted RBP16■□□□□ 0.15
AMBRA1-201ENST00000314845 CEP162Q5TB80 1403 aa16■□□□□ 0.15
AMBRA1-201ENST00000314845 CCDC136Q96JN2 1154 aa15.97■□□□□ 0.15
AMBRA1-201ENST00000314845 SCAF1Q9H7N4 1312 aaKnown RBP15.95■□□□□ 0.14
AMBRA1-201ENST00000314845 CEP164Q9UPV0 1460 aa15.94■□□□□ 0.14
AMBRA1-201ENST00000314845 ANP32BQ92688 251 aaKnown RBP15.93■□□□□ 0.14
AMBRA1-201ENST00000314845 TNIKQ9UKE5 1360 aa15.93■□□□□ 0.14
AMBRA1-201ENST00000314845 CDCA8Q53HL2 280 aa15.93■□□□□ 0.14
AMBRA1-201ENST00000314845 RGL3Q3MIN7 710 aa15.92■□□□□ 0.14
AMBRA1-201ENST00000314845 ERCC6Q03468 1493 aa15.9■□□□□ 0.14
AMBRA1-201ENST00000314845 C14orf37Q86TY3 774 aa15.9■□□□□ 0.14
AMBRA1-201ENST00000314845 BAZ1AQ9NRL2 1556 aaPredicted RBP15.89■□□□□ 0.13
AMBRA1-201ENST00000314845 HIRIP3Q9BW71 556 aaPredicted RBP15.89■□□□□ 0.13
AMBRA1-201ENST00000314845 ARID4BQ4LE39 1312 aaPredicted RBP15.89■□□□□ 0.13
AMBRA1-201ENST00000314845 MYH16Q9H6N6 1097 aa15.88■□□□□ 0.13
AMBRA1-201ENST00000314845 CFAP53Q96M91 514 aa15.86■□□□□ 0.13
AMBRA1-201ENST00000314845 A0A0G2JS52 829 aa15.83■□□□□ 0.12
AMBRA1-201ENST00000314845 MIER1Q8N108 512 aa15.83■□□□□ 0.12
AMBRA1-201ENST00000314845 SENP3Q9H4L4 574 aaPredicted RBP15.83■□□□□ 0.12
AMBRA1-201ENST00000314845 KNSTRNQ9Y448 316 aa15.82■□□□□ 0.12
AMBRA1-201ENST00000314845 ZBTB7CA1YPR0 619 aa15.82■□□□□ 0.12
AMBRA1-201ENST00000314845 CARD11Q9BXL7 1154 aa15.81■□□□□ 0.12
AMBRA1-201ENST00000314845 FHAD1B1AJZ9 1412 aa15.8■□□□□ 0.12
AMBRA1-201ENST00000314845 CCNB3Q8WWL7 1395 aa15.78■□□□□ 0.12
AMBRA1-201ENST00000314845 CARMIL1Q5VZK9 1371 aa15.77■□□□□ 0.12
AMBRA1-201ENST00000314845 PLEKHG5O94827 1062 aa15.77■□□□□ 0.11
AMBRA1-201ENST00000314845 HAP1P54257 671 aaPredicted RBP15.76■□□□□ 0.11
AMBRA1-201ENST00000314845 POGKQ9P215 609 aa15.74■□□□□ 0.11
AMBRA1-201ENST00000314845 CUX2O14529 1486 aa15.73■□□□□ 0.11
AMBRA1-201ENST00000314845 CECR2Q9BXF3 1484 aa15.73■□□□□ 0.11
AMBRA1-201ENST00000314845 MYO15BQ96JP2 1530 aa15.72■□□□□ 0.11
AMBRA1-201ENST00000314845 NUDCQ9Y266 331 aa15.71■□□□□ 0.11
AMBRA1-201ENST00000314845 PPM1GO15355 546 aaPredicted RBP15.71■□□□□ 0.11
AMBRA1-201ENST00000314845 IRX6P78412 446 aaPredicted RBP15.7■□□□□ 0.1
AMBRA1-201ENST00000314845 MAPK8IP3Q9UPT6 1336 aa15.68■□□□□ 0.1
AMBRA1-201ENST00000314845 KANK1Q14678 1352 aa15.68■□□□□ 0.1
AMBRA1-201ENST00000314845 HDGFP51858 240 aaKnown RBP15.66■□□□□ 0.1
AMBRA1-201ENST00000314845 SIN3AQ96ST3 1273 aa15.66■□□□□ 0.1
AMBRA1-201ENST00000314845 TIMELESSQ9UNS1 1208 aa15.65■□□□□ 0.1
AMBRA1-201ENST00000314845 EIF4G1Q04637 1599 aaKnown RBP15.64■□□□□ 0.09
AMBRA1-201ENST00000314845 PDS5BQ9NTI5 1447 aa15.63■□□□□ 0.09
AMBRA1-201ENST00000314845 BECN1Q14457 450 aa15.63■□□□□ 0.09
AMBRA1-201ENST00000314845 LMOD2Q6P5Q4 547 aa15.63■□□□□ 0.09
AMBRA1-201ENST00000314845 FTSJ3Q8IY81 847 aaKnown RBP15.62■□□□□ 0.09
AMBRA1-201ENST00000314845 CARMIL2Q6F5E8 1435 aa15.61■□□□□ 0.09
AMBRA1-201ENST00000314845 EIF5BO60841 1220 aaKnown RBP15.61■□□□□ 0.09
AMBRA1-201ENST00000314845 TMF1P82094 1093 aa15.61■□□□□ 0.09
AMBRA1-201ENST00000314845 NEUROD2Q15784 382 aa15.6■□□□□ 0.09
AMBRA1-201ENST00000314845 DCAF11Q8TEB1 546 aa15.6■□□□□ 0.09
AMBRA1-201ENST00000314845 SOGA1O94964 1423 aa15.6■□□□□ 0.09
AMBRA1-201ENST00000314845 DDRGK1Q96HY6 314 aa15.6■□□□□ 0.09
AMBRA1-201ENST00000314845 ARXQ96QS3 562 aa15.59■□□□□ 0.09
AMBRA1-201ENST00000314845 TRHP20396 242 aaPredicted RBP15.58■□□□□ 0.09
AMBRA1-201ENST00000314845 PNNQ9H307 717 aaKnown RBP15.58■□□□□ 0.09
AMBRA1-201ENST00000314845 CHMP4BQ9H444 224 aaKnown RBP15.58■□□□□ 0.08
AMBRA1-201ENST00000314845 SMARCA2P51531 1590 aa15.57■□□□□ 0.08
AMBRA1-201ENST00000314845 NBR1Q14596 966 aa15.56■□□□□ 0.08
AMBRA1-201ENST00000314845 LAS1LQ9Y4W2 734 aaKnown RBP15.56■□□□□ 0.08
AMBRA1-201ENST00000314845 NCLP19338 710 aaKnown RBP15.56■□□□□ 0.08
AMBRA1-201ENST00000314845 MLECQ14165 292 aa15.55■□□□□ 0.08
AMBRA1-201ENST00000314845 MS4A1P11836 297 aa15.55■□□□□ 0.08
AMBRA1-201ENST00000314845 CASC1Q6TDU7 716 aa15.55■□□□□ 0.08
AMBRA1-201ENST00000314845 TNNT2P45379 298 aaPredicted RBP15.54■□□□□ 0.08
AMBRA1-201ENST00000314845 GLIPR1L2Q4G1C9 344 aa15.54■□□□□ 0.08
AMBRA1-201ENST00000314845 VPS8Q8N3P4 1428 aa15.54■□□□□ 0.08
AMBRA1-201ENST00000314845 U2SURPO15042 1029 aaKnown RBP15.54■□□□□ 0.08
AMBRA1-201ENST00000314845 CCDC88BA6NC98 1476 aa15.54■□□□□ 0.08
AMBRA1-201ENST00000314845 GOLGA6L22H0YM25 854 aa15.54■□□□□ 0.08
AMBRA1-201ENST00000314845 ANP32EQ9BTT0 268 aa15.54■□□□□ 0.08
AMBRA1-201ENST00000314845 EFCAB2Q5VUJ9 269 aa15.53■□□□□ 0.08
AMBRA1-201ENST00000314845 GGT6Q6P531 493 aa15.53■□□□□ 0.08
AMBRA1-201ENST00000314845 SENP3-EIF4A1A0A087X0R7 540 aa15.53■□□□□ 0.08
AMBRA1-201ENST00000314845 CC2D1BQ5T0F9 858 aaKnown RBP15.53■□□□□ 0.08
AMBRA1-201ENST00000314845 SUPT16HQ9Y5B9 1047 aaKnown RBP15.53■□□□□ 0.08
AMBRA1-201ENST00000314845 ARHGAP35Q9NRY4 1499 aa15.52■□□□□ 0.08
AMBRA1-201ENST00000314845 SRPK2P78362 688 aaKnown RBP15.51■□□□□ 0.07
AMBRA1-201ENST00000314845 MROH2BQ7Z745 1585 aa15.51■□□□□ 0.07
AMBRA1-201ENST00000314845 TDRD9Q8NDG6 1382 aaKnown RBP15.51■□□□□ 0.07
AMBRA1-201ENST00000314845 FMN1Q68DA7 1419 aa15.51■□□□□ 0.07
AMBRA1-201ENST00000314845 SETD5Q9C0A6 1442 aa15.51■□□□□ 0.07
AMBRA1-201ENST00000314845 CDK11BP21127 795 aaKnown RBP15.51■□□□□ 0.07
AMBRA1-201ENST00000314845 PKD2Q13563 968 aa15.5■□□□□ 0.07
AMBRA1-201ENST00000314845 FRAT1Q92837 279 aaPredicted RBP15.49■□□□□ 0.07
AMBRA1-201ENST00000314845 MORC1Q86VD1 984 aa15.46■□□□□ 0.07
AMBRA1-201ENST00000314845 PPP4R2Q9NY27 417 aa15.45■□□□□ 0.06
AMBRA1-201ENST00000314845 NPHP1O15259 732 aa15.43■□□□□ 0.06
AMBRA1-201ENST00000314845 ANKRD30AQ9BXX3 1397 aa15.43■□□□□ 0.06
AMBRA1-201ENST00000314845 CADPSQ9ULU8 1353 aa15.42■□□□□ 0.06
AMBRA1-201ENST00000314845 SAFB2Q14151 953 aaKnown RBP eCLIP15.42■□□□□ 0.06
AMBRA1-201ENST00000314845 ZRSR1Q15695 479 aaKnown RBP15.42■□□□□ 0.06
AMBRA1-201ENST00000314845 KANK4Q5T7N3 995 aaPredicted RBP15.42■□□□□ 0.06
AMBRA1-201ENST00000314845 HDGFL2Q7Z4V5 671 aaPredicted RBP15.42■□□□□ 0.06
AMBRA1-201ENST00000314845 OS9Q13438 667 aaPredicted RBP15.42■□□□□ 0.06
AMBRA1-201ENST00000314845 NUP155O75694 1391 aa15.41■□□□□ 0.06
AMBRA1-201ENST00000314845 RGS3P49796 1198 aa15.4■□□□□ 0.06
AMBRA1-201ENST00000314845 RSPH4AQ5TD94 716 aa15.4■□□□□ 0.06
AMBRA1-201ENST00000314845 CCER2I3L3R5 266 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms