RNA–Protein interactions for RNA: ENST00000313654.13

LAMA3-202, Transcript of laminin subunit alpha 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LAMA3, Length 10,661 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-202ENST00000313654 CASC1Q6TDU7 716 aa16.79■□□□□ 0.28
LAMA3-202ENST00000313654 CLSTN1O94985 981 aa16.77■□□□□ 0.28
LAMA3-202ENST00000313654 DRC7Q8IY82 874 aa16.76■□□□□ 0.27
LAMA3-202ENST00000313654 PPM1GO15355 546 aaPredicted RBP16.75■□□□□ 0.27
LAMA3-202ENST00000313654 ZBTB7CA1YPR0 619 aa16.75■□□□□ 0.27
LAMA3-202ENST00000313654 TAOK2Q9UL54 1235 aa16.74■□□□□ 0.27
LAMA3-202ENST00000313654 L1TD1Q5T7N2 865 aaKnown RBP16.73■□□□□ 0.27
LAMA3-202ENST00000313654 NOP58Q9Y2X3 529 aaKnown RBP16.72■□□□□ 0.27
LAMA3-202ENST00000313654 DEKP35659 375 aaKnown RBP16.71■□□□□ 0.27
LAMA3-202ENST00000313654 SETQ01105 290 aaPredicted RBP16.7■□□□□ 0.26
LAMA3-202ENST00000313654 WDR43Q15061 677 aaKnown RBP eCLIP16.7■□□□□ 0.26
LAMA3-202ENST00000313654 PNNQ9H307 717 aaKnown RBP16.68■□□□□ 0.26
LAMA3-202ENST00000313654 GOLGA6L1Q8N7Z2 621 aa16.68■□□□□ 0.26
LAMA3-202ENST00000313654 TMC1Q8TDI8 760 aa16.67■□□□□ 0.26
LAMA3-202ENST00000313654 A0A0G2JS52 829 aa16.67■□□□□ 0.26
LAMA3-202ENST00000313654 KIAA2012Q0VF49 1180 aa16.67■□□□□ 0.26
LAMA3-202ENST00000313654 PRM3Q9NNZ6 103 aa16.66■□□□□ 0.26
LAMA3-202ENST00000313654 A0A0U1RQG5 324 aaPredicted RBP16.65■□□□□ 0.26
LAMA3-202ENST00000313654 HSP90AB1P08238 724 aaKnown RBP16.65■□□□□ 0.26
LAMA3-202ENST00000313654 TONSLQ96HA7 1378 aa16.64■□□□□ 0.25
LAMA3-202ENST00000313654 DDX10Q13206 875 aaKnown RBP16.6■□□□□ 0.25
LAMA3-202ENST00000313654 GOLGA6L4A6NEF3 574 aa16.58■□□□□ 0.25
LAMA3-202ENST00000313654 PTMSP20962 102 aa16.58■□□□□ 0.24
LAMA3-202ENST00000313654 MRS2Q9HD23 443 aa16.58■□□□□ 0.24
LAMA3-202ENST00000313654 FGD1P98174 961 aa16.56■□□□□ 0.24
LAMA3-202ENST00000313654 NAP1L2Q9ULW6 460 aaPredicted RBP16.56■□□□□ 0.24
LAMA3-202ENST00000313654 PATL2C9JE40 543 aaKnown RBP16.54■□□□□ 0.24
LAMA3-202ENST00000313654 FTSJ3Q8IY81 847 aaKnown RBP16.54■□□□□ 0.24
LAMA3-202ENST00000313654 HSP90AA2PQ14568 343 aaPredicted RBP16.53■□□□□ 0.24
LAMA3-202ENST00000313654 PDE4CQ08493 712 aa16.52■□□□□ 0.24
LAMA3-202ENST00000313654 HSCBQ8IWL3 235 aa16.5■□□□□ 0.23
LAMA3-202ENST00000313654 STAG3Q9UJ98 1225 aa16.48■□□□□ 0.23
LAMA3-202ENST00000313654 APPP05067 770 aa16.48■□□□□ 0.23
LAMA3-202ENST00000313654 RGS3P49796 1198 aa16.46■□□□□ 0.23
LAMA3-202ENST00000313654 SPRYD3Q8NCJ5 442 aa16.46■□□□□ 0.22
LAMA3-202ENST00000313654 VSIG10Q8N0Z9 540 aa16.45■□□□□ 0.22
LAMA3-202ENST00000313654 KCNJ4P48050 445 aa16.45■□□□□ 0.22
LAMA3-202ENST00000313654 USP35Q9P2H5 1018 aa16.44■□□□□ 0.22
LAMA3-202ENST00000313654 ESF1Q9H501 851 aaKnown RBP16.42■□□□□ 0.22
LAMA3-202ENST00000313654 CHGAP10645 457 aaKnown RBP16.42■□□□□ 0.22
LAMA3-202ENST00000313654 TAF7LQ5H9L4 462 aa16.42■□□□□ 0.22
LAMA3-202ENST00000313654 GNL2Q13823 731 aaKnown RBP16.41■□□□□ 0.22
LAMA3-202ENST00000313654 PLPPR3Q6T4P5 718 aa16.41■□□□□ 0.22
LAMA3-202ENST00000313654 FBXO3Q9UK99 471 aa16.41■□□□□ 0.22
LAMA3-202ENST00000313654 ARID3CA6NKF2 412 aa16.4■□□□□ 0.22
LAMA3-202ENST00000313654 GZF1Q9H116 711 aaPredicted RBP16.39■□□□□ 0.21
LAMA3-202ENST00000313654 ZNF771Q7L3S4 317 aaPredicted RBP16.39■□□□□ 0.21
LAMA3-202ENST00000313654 ZNF777Q9ULD5 760 aaPredicted RBP16.38■□□□□ 0.21
LAMA3-202ENST00000313654 RSPH6AQ9H0K4 717 aa16.35■□□□□ 0.21
LAMA3-202ENST00000313654 OS9Q13438 667 aaPredicted RBP16.35■□□□□ 0.21
LAMA3-202ENST00000313654 RRP12Q5JTH9 1297 aaKnown RBP16.35■□□□□ 0.21
LAMA3-202ENST00000313654 MIER1Q8N108 512 aa16.34■□□□□ 0.21
LAMA3-202ENST00000313654 PLEKHG5O94827 1062 aa16.33■□□□□ 0.2
LAMA3-202ENST00000313654 GBP4Q96PP9 640 aa16.3■□□□□ 0.2
LAMA3-202ENST00000313654 SENP3-EIF4A1A0A087X0R7 540 aa16.3■□□□□ 0.2
LAMA3-202ENST00000313654 SUPT16HQ9Y5B9 1047 aaKnown RBP16.3■□□□□ 0.2
LAMA3-202ENST00000313654 C14orf37Q86TY3 774 aa16.29■□□□□ 0.2
LAMA3-202ENST00000313654 GOLGA2Q08379 1002 aa16.29■□□□□ 0.2
LAMA3-202ENST00000313654 SYAP1Q96A49 352 aaPredicted RBP16.29■□□□□ 0.2
LAMA3-202ENST00000313654 MCCP23508 829 aa16.29■□□□□ 0.2
LAMA3-202ENST00000313654 ISY1Q9ULR0 285 aaKnown RBP16.29■□□□□ 0.2
LAMA3-202ENST00000313654 TPM4P67936 248 aa16.27■□□□□ 0.2
LAMA3-202ENST00000313654 NPHP1O15259 732 aa16.27■□□□□ 0.19
LAMA3-202ENST00000313654 ANO8Q9HCE9 1232 aaPredicted RBP16.26■□□□□ 0.19
LAMA3-202ENST00000313654 GOLGA6L3A6NEY3 463 aa16.25■□□□□ 0.19
LAMA3-202ENST00000313654 PPP4R2Q9NY27 417 aa16.24■□□□□ 0.19
LAMA3-202ENST00000313654 FBLN2P98095 1184 aa16.23■□□□□ 0.19
LAMA3-202ENST00000313654 CCAR2Q8N163 923 aaKnown RBP16.22■□□□□ 0.19
LAMA3-202ENST00000313654 TPM3P06753 285 aa16.22■□□□□ 0.19
LAMA3-202ENST00000313654 NOM1Q5C9Z4 860 aaKnown RBP16.22■□□□□ 0.19
LAMA3-202ENST00000313654 CSRNP3Q8WYN3 585 aa16.21■□□□□ 0.18
LAMA3-202ENST00000313654 STK11IPQ8N1F8 1099 aa16.2■□□□□ 0.18
LAMA3-202ENST00000313654 KDM2AQ9Y2K7 1162 aa16.19■□□□□ 0.18
LAMA3-202ENST00000313654 TEX35Q5T0J7 233 aa16.19■□□□□ 0.18
LAMA3-202ENST00000313654 MEX3CQ5U5Q3 659 aaKnown RBP16.19■□□□□ 0.18
LAMA3-202ENST00000313654 FRAT1Q92837 279 aaPredicted RBP16.19■□□□□ 0.18
LAMA3-202ENST00000313654 GPS2Q13227 327 aa16.19■□□□□ 0.18
LAMA3-202ENST00000313654 CREBRFQ8IUR6 639 aa16.18■□□□□ 0.18
LAMA3-202ENST00000313654 PODXL2Q9NZ53 605 aa16.18■□□□□ 0.18
LAMA3-202ENST00000313654 TIMELESSQ9UNS1 1208 aa16.18■□□□□ 0.18
LAMA3-202ENST00000313654 HIRIP3Q9BW71 556 aaPredicted RBP16.17■□□□□ 0.18
LAMA3-202ENST00000313654 MAP7D2Q96T17 732 aa16.17■□□□□ 0.18
LAMA3-202ENST00000313654 SLKQ9H2G2 1235 aaPredicted RBP16.17■□□□□ 0.18
LAMA3-202ENST00000313654 CEP89Q96ST8 783 aa16.17■□□□□ 0.18
LAMA3-202ENST00000313654 P3H3Q8IVL6 736 aa16.16■□□□□ 0.18
LAMA3-202ENST00000313654 B4GALNT3Q6L9W6 998 aa16.16■□□□□ 0.18
LAMA3-202ENST00000313654 PHF14O94880 888 aa16.15■□□□□ 0.18
LAMA3-202ENST00000313654 HTATSF1O43719 755 aaKnown RBP16.15■□□□□ 0.18
LAMA3-202ENST00000313654 CCDC70Q6NSX1 233 aa16.14■□□□□ 0.18
LAMA3-202ENST00000313654 CHMP4BQ9H444 224 aaKnown RBP16.14■□□□□ 0.17
LAMA3-202ENST00000313654 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.14■□□□□ 0.17
LAMA3-202ENST00000313654 HSP90B1P14625 803 aaKnown RBP16.14■□□□□ 0.17
LAMA3-202ENST00000313654 PKNOX2Q96KN3 472 aa16.14■□□□□ 0.17
LAMA3-202ENST00000313654 SENP3Q9H4L4 574 aaPredicted RBP16.14■□□□□ 0.17
LAMA3-202ENST00000313654 CFAP53Q96M91 514 aa16.14■□□□□ 0.17
LAMA3-202ENST00000313654 CALD1Q05682 793 aaKnown RBP16.12■□□□□ 0.17
LAMA3-202ENST00000313654 KIAA1211Q6ZU35 1233 aa16.11■□□□□ 0.17
LAMA3-202ENST00000313654 NEUROD2Q15784 382 aa16.09■□□□□ 0.17
LAMA3-202ENST00000313654 RBM19Q9Y4C8 960 aaKnown RBP16.08■□□□□ 0.16
LAMA3-202ENST00000313654 MAPK8IP3Q9UPT6 1336 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms